Nils Gehlenborg

85 papers A* 3A 1Misc 6Journal 68Unranked 7
YearRankTypeTitle / Venue / Authors
2026 A* conf
Automatic Synthesis of Visualization Design Knowledge Bases.
CHI
Hyeok Kim, Sehi L'Yi, Nils Gehlenborg, Jeffrey Heer
2026 J jnl
Automatic Synthesis of Visualization Design Knowledge Bases.
CoRR
Hyeok Kim, Sehi L'Yi, Nils Gehlenborg, Jeffrey Heer
2026 J jnl
Can LLMs Bridge Domain and Visualization? A Case Study on High-Dimension Data Visualization in Single-Cell Transcriptomics.
IEEE Trans. Vis. Comput. Graph.
Qianwen Wang, Xinyi Liu, Nils Gehlenborg
2026 J jnl
Design Space and Declarative Grammar for 3D Genomic Data Visualization.
IEEE Trans. Vis. Comput. Graph.
David Kouril, Trevor Manz, Sehi L'Yi, Nils Gehlenborg
2026 J jnl
Uchimata: a toolkit for visualization of 3D genome structures on the web and in computational notebooks.
Bioinform.
David Kouril, Trevor Manz, Tereza Clarence, Nils Gehlenborg
2025 J jnl
A General Framework for Comparing Embedding Visualizations Across Class-Label Hierarchies.
IEEE Trans. Vis. Comput. Graph.
Trevor Manz, Fritz Lekschas, Evan Greene, Greg Finak, Nils Gehlenborg
2025 J jnl
A Generative AI System for Biomedical Data Discovery with Grammar-Based Visualizations.
CoRR
Devin Lange, Shanghua Gao, Pengwei Sui, Austen Money, Priya Misner, Marinka Zitnik, Nils Gehlenborg
2025 A* conf
Beyond Time and Accuracy: Strategies in Visual Problem-Solving.
CHI
Eric Mörth, Zona Kostic, Nils Gehlenborg, Hanspeter Pfister, Johanna Beyer, Carolina Nobre
2025 J jnl
Cell2Cell: Explorative Cell Interaction Analysis in Multi-Volumetric Tissue Data.
IEEE Trans. Vis. Comput. Graph.
Eric Mörth, Kevin Sidak, Zoltan Maliga, Torsten Möller, Nils Gehlenborg, Peter K. Sorger, Hanspeter Pfister, Johanna Beyer, Robert Krüger
2025 J jnl
Characterizing Multimodal Interaction in Visualization Authoring Tools.
CoRR
Astrid van den Brandt, Sehi L'Yi, Huyen N. Nguyen, Anna Vilanova, Nils Gehlenborg
2025 J jnl
EasyVitessce: auto-magically adding interactivity to Scverse single-cell and spatial biology plots.
CoRR
Selena Luo, Mark S. Keller, Tabassum Kakar, Lisa Choy, Nils Gehlenborg
2025 J jnl
GQVis: A Dataset of Genomics Data Questions and Visualizations for Generative AI.
CoRR
Skylar Sargent Walters, Arthea Valderrama, Thomas C. Smits, David Kouril, Huyen N. Nguyen, Sehi L'Yi, Devin Lange, Nils Gehlenborg
2025 J jnl
Interactive visualization of kidney micro-compartmental segmentations and associated pathomics on whole slide images.
CoRR
Mark S. Keller, Nicholas J. Lucarelli, Yijiang Chen, Samuel P. Border, Andrew Janowczyk, Jonathan Himmelfarb, Matthias Kretzler, Jeffrey Hodgin, Laura Barisoni, Dawit Demeke, Leal Herlitz, Gilbert Moeckel, Avi Z. Rosenberg, Yanli Ding, Pinaki Sarder, Nils Gehlenborg
2025 J jnl
Learnable and Expressive Visualization Authoring Through Blended Interfaces.
IEEE Trans. Vis. Comput. Graph.
Sehi L'Yi, Astrid van den Brandt, Etowah Adams, Huyen N. Nguyen, Nils Gehlenborg
2025 J jnl
Safire: Similarity Framework for Visualization Retrieval.
CoRR
Huyen N. Nguyen, Nils Gehlenborg
2025 J jnl
Ten simple rules for making biomedical data resources accessible.
PLoS Comput. Biol.
Thomas C. Smits, Lawrence Weru, Nils Gehlenborg, Sehi L'Yi
2025 J jnl
The State of Single-Cell Atlas Data Visualization in the Biological Literature.
IEEE Computer Graphics and Applications
Mark S. Keller, Eric Mörth, Thomas C. Smits, Simon Warchol, Grace Guo, Qianwen Wang, Robert Krüger, Hanspeter Pfister, Nils Gehlenborg
2025 J jnl
Understanding Visualization Authoring Techniques for Genomics Data in the Context of Personas and Tasks.
IEEE Trans. Vis. Comput. Graph.
Astrid van den Brandt, Sehi L'Yi, Huyen N. Nguyen, Anna Vilanova, Nils Gehlenborg
2025 J jnl
Vitessce Link: A Mixed Reality and 2D Display Hybrid Approach for Visual Analysis of 3D Tissue Maps.
CoRR
Eric Mörth, Morgan L. Turner, Cydney Nielsen, Xianhao Carton Liu, Mark S. Keller, Lisa Choy, John Conroy, Tabassum Kakar, Clarence Yapp, Alex Wong, Peter K. Sorger, Liam McLaughlin, Sanjay Jain, Johanna Beyer, Hanspeter Pfister, Chen Zhu-Tian, Nils Gehlenborg
2025 J jnl
YAC: Bridging Natural Language and Interactive Visual Exploration with Generative AI for Biomedical Data Discovery.
CoRR
Devin Lange, Shanghua Gao, Pengwei Sui, Austen Money, Priya Misner, Marinka Zitnik, Nils Gehlenborg
2025 J jnl
scellop: A Scalable Redesign of Cell Population Plots for Single-Cell Data.
CoRR
Thomas C. Smits, Nikolay Akhmetov, Tiffany S. Liaw, Mark S. Keller, Eric Mörth, Nils Gehlenborg
2024 J jnl
AltGosling: automatic generation of text descriptions for accessible genomics data visualization.
Bioinform.
Thomas C. Smits, Sehi L'Yi, Andrew P. Mar, Nils Gehlenborg
2024 — conf
Any notebook served: authoring and sharing reusable interactive widgets.
SciPy
Trevor Manz, Nils Gehlenborg, Nezar Abdennur
2024 — conf
Explaining Unfamiliar Genomics Data Visualizations to a Blind Individual through Transitions.
AccessViz@VIS
Thomas C. Smits, Sehi L'Yi, Huyen N. Nguyen, Andrew P. Mar, Nils Gehlenborg
2024 A conf
Use-Coordination: Model, Grammar, and Library for Implementation of Coordinated Multiple Views.
IEEE VIS
Mark S. Keller, Trevor Manz, Nils Gehlenborg
2024 J jnl
anywidget: reusable widgets for interactive analysis and visualization in computational notebooks.
J. Open Source Softw.
Trevor Manz, Nezar Abdennur, Nils Gehlenborg
2023 J jnl
Beyond Generating Code: Evaluating GPT on a Data Visualization Course.
CoRR
Chen Zhu-Tian, Chenyang Zhang, Qianwen Wang, Jakob Troidl, Simon Warchol, Johanna Beyer, Nils Gehlenborg, Hanspeter Pfister
2023 J jnl
Cistrome Explorer: an interactive visual analysis tool for large-scale epigenomic data.
Bioinform.
Sehi L'Yi, Mark S. Keller, Ariaki Dandawate, Len Taing, Chen-Hao Chen, Myles Brown, Clifford A. Meyer, Nils Gehlenborg
2023 A* conf
DRAVA: Aligning Human Concepts with Machine Learning Latent Dimensions for the Visual Exploration of Small Multiples.
CHI
Qianwen Wang, Sehi L'Yi, Nils Gehlenborg
2023 — conf
Enabling Multimodal User Interactions for Genomics Visualization Creation.
IEEE VIS (Short Papers)
Qianwen Wang, Xiao Liu, Man Qing Liang, Sehi L'Yi, Nils Gehlenborg
2023 J jnl
Extending the Nested Model for User-Centric XAI: A Design Study on GNN-based Drug Repurposing.
IEEE Trans. Vis. Comput. Graph.
Qianwen Wang, Kexin Huang, Payal Chandak, Marinka Zitnik, Nils Gehlenborg
2023 J jnl
GenoREC: A Recommendation System for Interactive Genomics Data Visualization.
IEEE Trans. Vis. Comput. Graph.
Aditeya Pandey, Sehi L'Yi, Qianwen Wang, Michelle A. Borkin, Nils Gehlenborg
2023 J jnl
Gos: a declarative library for interactive genomics visualization in Python.
Bioinform.
Trevor Manz, Sehi L'Yi, Nils Gehlenborg
2023 J jnl
Multi-View Design Patterns and Responsive Visualization for Genomics Data.
IEEE Trans. Vis. Comput. Graph.
Sehi L'Yi, Nils Gehlenborg
2023 J jnl
Polyphony: an Interactive Transfer Learning Framework for Single-Cell Data Analysis.
IEEE Trans. Vis. Comput. Graph.
Furui Cheng, Mark S. Keller, Huamin Qu, Nils Gehlenborg, Qianwen Wang
2023 — conf
The Role of Visualization in Genomics Data Analysis Workflows: The Interviews.
IEEE VIS (Short Papers)
Sehi L'Yi, Qianwen Wang, Nils Gehlenborg
2022 J jnl
Gosling: A Grammar-based Toolkit for Scalable and Interactive Genomics Data Visualization.
IEEE Trans. Vis. Comput. Graph.
Sehi L'Yi, Qianwen Wang, Fritz Lekschas, Nils Gehlenborg
2022 J jnl
International electronic health record-derived post-acute sequelae profiles of COVID-19 patients.
npj Digit. Medicine
Harrison G. Zhang, Arianna Dagliati, Zahra Shakeri Hossein Abad, Xin Xiong, Clara-Lea Bonzel, Zongqi Xia, Bryce W. Q. Tan, Paul Avillach, Gabriel A. Brat, Chuan Hong, Michele Morris, Shyam Visweswaran, Lav P. Patel, Alba Gutiérrez-Sacristán, David A. Hanauer, John H. Holmes, Malarkodi Jebathilagam Samayamuthu, Florence T. Bourgeois, Sehi L'Yi, Sarah E. Maidlow, Bertrand Moal, Shawn N. Murphy, Zachary H. Strasser, Antoine Neuraz, Kee Yuan Ngiam, Ne-Hooi Will Loh, Gilbert S. Omenn, Andrea Prunotto, Lauren A. Dalvin, Jeffrey G. Klann, Petra Schubert, Fernando J. Sanz Vidorreta, Vincent Benoit, Guillaume Verdy, Ramakanth Kavuluru, Hossein Estiri, Yuan Luo, Alberto Malovini, Valentina Tibollo, Riccardo Bellazzi, Kelly Cho, Yuk-Lam Ho, Amelia L. M. Tan, Byorn W. L. Tan, Nils Gehlenborg, Sara Lozano-Zahonero, Vianney Jouhet, Luca Chiovato, Bruce J. Aronow, Emma M. S. Toh, Wei Gen Scott Wong, Sara Pizzimenti, Kavishwar B. Wagholikar, Mauro Bucalo, Tianxi Cai, Andrew M. South, Isaac S. Kohane, Griffin M. Weber
2022 J jnl
ThreadStates: State-based Visual Analysis of Disease Progression.
IEEE Trans. Vis. Comput. Graph.
Qianwen Wang, Tali Mazor, Theresa Anisja Harbig, Ethan Cerami, Nils Gehlenborg
2021 J jnl
A Generic Framework and Library for Exploration of Small Multiples through Interactive Piling.
IEEE Trans. Vis. Comput. Graph.
Fritz Lekschas, Xinyi Zhou, Wei Chen, Nils Gehlenborg, Benjamin Bach, Hanspeter Pfister
2021 Misc conf
Making Tools that People Will Use: User-Centered Design in Computational Biology Research.
PSB
Mary Goldman, Nils Gehlenborg
2020 J jnl
A Generic Framework and Library for Exploration of Small Multiples through Interactive Piling.
CoRR
Fritz Lekschas, Xinyi Zhou, Wei Chen, Nils Gehlenborg, Benjamin Bach, Hanspeter Pfister
2020 J jnl
International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium.
npj Digit. Medicine
Gabriel A. Brat, Griffin M. Weber, Nils Gehlenborg, Paul Avillach, Nathan P. Palmer, Luca Chiovato, James J. Cimino, Lemuel R. Waitman, Gilbert S. Omenn, Alberto Malovini, Jason H. Moore, Brett K. Beaulieu-Jones, Valentina Tibollo, Shawn N. Murphy, Sehi L'Yi, Mark S. Keller, Riccardo Bellazzi, David A. Hanauer, Arnaud Serret-Larmande, Alba Gutiérrez-Sacristán, John J. Holmes, Douglas S. Bell, Kenneth D. Mandl, Robert W. Follett, Jeffrey G. Klann, Douglas A. Murad, Luigia Scudeller, Mauro Bucalo, Katie G. Kirchoff, Jean B. Craig, Jihad S. Obeid, Vianney Jouhet, Romain Griffier, Sébastien Cossin, Bertrand Moal, Lav P. Patel, Antonio Bellasi, Hans-Ulrich Prokosch, Detlef Kraska, Piotr Sliz, Amelia L. M. Tan, Kee Yuan Ngiam, Alberto Zambelli, Danielle L. Mowery, Emily Schriver, Batsal Devkota, Robert L. Bradford, Mohamad Daniar, Christel Daniel, Vincent Benoit, Romain Bey, Nicolas Paris, Patricia Serre, Nina Orlova, Julien Dubiel, Martin Hilka, Anne-Sophie Jannot, Stéphane Bréant, Judith Leblanc, Nicolas Griffon, Anita Burgun, Mélodie Bernaux, Arnaud Sandrin, Elisa Salamanca, Sylvie Cormont, Thomas Ganslandt, Tobias Gradinger, Julien Champ, Martin Boeker, Patricia Martel, Loic Estève, Alexandre Gramfort, Olivier Grisel, Damien Leprovost, Thomas Moreau, Gaël Varoquaux, Jill-Jênn Vie, Demian Wassermann, Arthur Mensch, Charlotte Caucheteux, Christian Haverkamp, Guillaume Lemaitre, Silvano Bosari, Ian D. Krantz, Andrew M. South, Tianxi Cai, Isaac S. Kohane
2020 J jnl
Pattern-Driven Navigation in 2D Multiscale Visualizations with Scalable Insets.
IEEE Trans. Vis. Comput. Graph.
Fritz Lekschas, Michael Behrisch, Benjamin Bach, Peter Kerpedjiev, Nils Gehlenborg, Hanspeter Pfister
2020 J jnl
Peax : Interactive Visual Pattern Search in Sequential Data Using Unsupervised Deep Representation Learning.
Comput. Graph. Forum
Fritz Lekschas, Brant Peterson, Daniel Haehn, Eric Ma, Nils Gehlenborg, Hanspeter Pfister
2019 J jnl
Lineage: Visualizing Multivariate Clinical Data in Genealogy Graphs.
IEEE Trans. Vis. Comput. Graph.
Carolina Nobre, Nils Gehlenborg, Hilary Coon, Alexander Lex
2019 — conf
Periphery Plots for Contextualizing Heterogeneous Time-Based Charts.
IEEE VIS (Short Papers)
Bryce Morrow, Trevor Manz, Arlene E. Chung, Nils Gehlenborg, David Gotz
2019 J jnl
Periphery Plots for Contextualizing Heterogeneous Time-Based Charts.
CoRR
Bryce Morrow, Trevor Manz, Arlene E. Chung, Nils Gehlenborg, David Gotz
2019 Misc conf
Precision VISSTA: Bring-Your-Own-Device (BYOD) mHealth Data for Precision Health.
AMIA
Arlene E. Chung, Kimberly Glass, Jacob Leisey-Bartsch, Lucas Mentch, Nils Gehlenborg, David Gotz
2019 Misc conf
Precision VISSTA: Machine Learning Prediction and Inference for Bring-Your-Own-Device (BYOD) mHealth Data.
AMIA
Tim Coleman, Lucas Mentch, Kimberly Glass, David Gotz, Nils Gehlenborg, Arlene E. Chung
2019 J jnl
Tasks, Techniques, and Tools for Genomic Data Visualization.
Comput. Graph. Forum
Sabrina Nusrat, Theresa Anisja Harbig, Nils Gehlenborg
2019 J jnl
Tasks, Techniques, and Tools for Genomic Data Visualization.
CoRR
Sabrina Nusrat, Theresa Anisja Harbig, Nils Gehlenborg
2019 J jnl
The human body at cellular resolution: the NIH Human Biomolecular Atlas Program.
Nat.
Michael P. Snyder, Shin Lin, Amanda Posgai, Mark Atkinson, Aviv Regev, Jennifer Rood, Orit Rozenblatt-Rosen, Leslie Gaffney, Anna Hupalowska, Rahul Satija, Nils Gehlenborg, Jay Shendure, Julia Laskin, Pehr Harbury, Nicholas A. Nystrom, Jonathan C. Silverstein, Ziv Bar-Joseph, Kun Zhang, Katy Börner, Yiing Lin, Richard Conroy, Dena Procaccini, Ananda L. Roy, Ajay Pillai, Marishka Brown, Zorina S. Galis, Long Cai, Cole Trapnell, Dana Jackson, Garry P. Nolan, William James Greenleaf, Sylvia K. Plevritis, Sara Ahadi, Stephanie A. Nevins, Hayan Lee, Christian Martijn Schuerch, Sarah Black, Vishal Gautham Venkataraaman, Ed Esplin, Aaron Horning, Amir Bahmani, Xin Sun, Sanjay Jain, James S. Hagood, Gloria Pryhuber, Peter V. Kharchenko, Bernd Bodenmiller, Todd Brusko, Michael Clare-Salzler, Harry Nick, Kevin Otto, Clive Wasserfall, Marda Jorgensen, Maigan Brusko, Sergio Maffioletti, Richard M. Caprioli, Jeffrey M. Spraggins, Danielle Gutierrez, Nathan Heath Patterson, Elizabeth K. Neumann, Raymond Harris, Mark P. de Caestecker, Agnes B. Fogo, Raf Van de Plas, Ken Lau, Guo-Cheng Yuan, Qian Zhu, Ruben Dries, Peng Yin, Sinem K. Saka, Jocelyn Y. Kishi, Yu Wang, Isabel Goldaracena, Dong Hye Ye, Kristin E. Burnum-Johnson, Paul D. Piehowski, Charles Ansong, Ying Zhu, Tushar Desai, Jay Mulye, Peter Chou, Monica Nagendran, Sarah A. Teichmann, Benedict Paten, Robert F. Murphy, Jian Ma, Vladimir Yu. Kiselev, Carl Kingsford, Allyson Ricarte, Maria Keays, Sushma Anand Akoju, Matthew Ruffalo, Margaret Vella, Chuck McCallum, Leonard E. Cross, Samuel H. Friedman, Randy W. Heiland, Bruce William Herr II, Paul Macklin, Ellen M. Quardokus, Lisel Record, James P. Sluka, Griffin M. Weber, Philip D. Blood, Alexander Ropelewski, William Shirey, Robin M. Scibek, Paula M. Mabee, W. Christopher Lenhardt, Kimberly Robasky, Stavros Michailidis, John C. Marioni, Andrew Butler, Tim Stuart, Eyal Fisher, Shila Ghazanfar, Gökcen Eraslan, Tommaso Biancalani, Eeshit D. Vaishnav, Pothur Srinivas, Aaron Pawlyk, Salvatore Sechi, Elizabeth L. Wilder, James Anderson
2018 Misc conf
Data Science in Biomedical Informatics Education: Critical Problems and Innovative Solutions.
AMIA
Harry Hochheiser, Javed Mostafa, Nils Gehlenborg, Shannon K. McWeeney, Valerie Florance
2018 J jnl
HiPiler: Visual Exploration of Large Genome Interaction Matrices with Interactive Small Multiples.
IEEE Trans. Vis. Comput. Graph.
Fritz Lekschas, Benjamin Bach, Peter Kerpedjiev, Nils Gehlenborg, Hanspeter Pfister
2018 J jnl
SATORI: a system for ontology-guided visual exploration of biomedical data repositories.
Bioinform.
Fritz Lekschas, Nils Gehlenborg
2018 — conf
Visual Pattern-Driven Exploration of Big Data.
BDVA
Michael Behrisch, Robert Krüger, Fritz Lekschas, Tobias Schreck, Nils Gehlenborg, Hanspeter Pfister
2018 J jnl
Visual Pattern-Driven Exploration of Big Data.
CoRR
Michael Behrisch, Robert Krüger, Fritz Lekschas, Tobias Schreck, Nils Gehlenborg, Hanspeter Pfister
2018 J jnl
Visualization of Biological Data - Crossroads (Dagstuhl Seminar 18161).
Dagstuhl Reports
Jan Aerts, Nils Gehlenborg, Georgeta Elisabeta Marai, Kay Katja Nieselt
2017 J jnl
Interactive visual exploration and refinement of cluster assignments.
BMC Bioinform.
Michael Kern, Alexander Lex, Nils Gehlenborg, Chris R. Johnson
2017 J jnl
UpSetR: an R package for the visualization of intersecting sets and their properties.
Bioinform.
Jake R. Conway, Alexander Lex, Nils Gehlenborg
2016 J jnl
AVOCADO: Visualization of Workflow-Derived Data Provenance for Reproducible Biomedical Research.
Comput. Graph. Forum
Holger Stitz, S. Luger, Marc Streit, Nils Gehlenborg
2016 J jnl
From Visual Exploration to Storytelling and Back Again.
Comput. Graph. Forum
Samuel Gratzl, Alexander Lex, Nils Gehlenborg, Nicola Cosgrove, Marc Streit
2016 Misc conf
Session Introduction.
PSB
Arjun K. Manrai, Chirag J. Patel, Nils Gehlenborg, Nicholas P. Tatonetti, John P. A. Ioannidis, Isaac S. Kohane
2016 — conf
TaCo: Comparative Visualization of Large Tabular Data.
EuroVis (Posters)
Reem Hourieh, Holger Stitz, Nils Gehlenborg, Marc Streit
2014 J jnl
Comparative analysis of metazoan chromatin organization Open.
Nat.
Joshua Wing Kei Ho, Youngsook L. Jung, Tao Liu, Burak Han Alver, Soohyun Lee, Kohta Ikegami, Kyung-Ah Sohn, Aki Minoda, Michael Y. Tolstorukov, Alex Appert, Stephen C. J. Parker, Tingting Gu, Anshul Kundaje, Nicole C. Riddle, Eric Bishop, Thea A. Egelhofer, Sheng'en Shawn Hu, Artyom A. Alekseyenko, Andreas Rechtsteiner, Dalal Asker, Jason A. Belsky, Sarah K. Bowman, Q. Brent Chen, Ron A.-J. Chen, Daniel S. Day, Yan Dong, Andrea C. Dose, Xikun Duan, Charles B. Epstein, Sevinc Ercan, Elise A. Feingold, Francesco Ferrari, Jacob M. Garrigues, Nils Gehlenborg, Peter J. Good, Psalm Haseley, Daniel He, Moritz Herrmann, Michael M. Hoffman, Tess E. Jeffers, Peter V. Kharchenko, Paulina Kolasinska-Zwierz, Chitra V. Kotwaliwale, Nischay Kumar, Sasha A. Langley, Erica Larschan, Isabel Latorre, Maxwell W. Libbrecht, Xueqiu Lin, Richard Park, Michael J. Pazin, Hoang N. Pham, Annette Plachetka, Bo Qin, Yuri B. Schwartz, Noam Shoresh, Przemyslaw Stempor, Anne Vielle, Chengyang Wang, Christina M. Whittle, Huiling Xue, Robert E. Kingston, Ju Han Kim, Bradley E. Bernstein, Abby F. Dernburg, Vincenzo Pirrotta, Mitzi I. Kuroda, William S. Noble, Thomas D. Tullius, Manolis Kellis, David M. MacAlpine, Susan Strome, Sarah C. R. Elgin, Xiaole Shirley Liu, Jason D. Lieb, Julie Ahringer, Gary H. Karpen, Peter J. Park
2014 J jnl
Domino: Extracting, Comparing, and Manipulating Subsets Across Multiple Tabular Datasets.
IEEE Trans. Vis. Comput. Graph.
Samuel Gratzl, Nils Gehlenborg, Alexander Lex, Hanspeter Pfister, Marc Streit
2014 J jnl
Ontologies in Biological Data Visualization.
IEEE Computer Graphics and Applications
Sheelagh Carpendale, Min Chen, Daniel Evanko, Nils Gehlenborg, Carsten Görg, Lawrence Hunter, Francis Rowland, Margaret-Anne D. Storey, Hendrik Strobelt
2014 J jnl
UpSet: Visualization of Intersecting Sets.
IEEE Trans. Vis. Comput. Graph.
Alexander Lex, Nils Gehlenborg, Hendrik Strobelt, Romain Vuillemot, Hanspeter Pfister
2013 J jnl
Don't Wear Your New Shoes (Yet): Taking the Right Steps to Become a Successful Principal Investigator.
PLoS Comput. Biol.
Jeroen de Ridder, Thomas Abeel, Magali Michaut, Venkata P. Satagopam, Nils Gehlenborg
2013 J jnl
LineUp: Visual Analysis of Multi-Attribute Rankings.
IEEE Trans. Vis. Comput. Graph.
Samuel Gratzl, Alexander Lex, Nils Gehlenborg, Hanspeter Pfister, Marc Streit
2013 J jnl
Nozzle: a report generation toolkit for data analysis pipelines.
Bioinform.
Nils Gehlenborg, Michael S. Noble, Gad Getz, Lynda Chin, Peter J. Park
2012 J jnl
Data-driven information retrieval in heterogeneous collections of transcriptomics data links
Bioinform.
José Caldas, Nils Gehlenborg, Eeva Kettunen, Ali Faisal, Mikko Rönty, Andrew G. Nicholson, Sakari Knuutila, Alvis Brazma, Samuel Kaski
2012 J jnl
StratomeX: Visual Analysis of Large-Scale Heterogeneous Genomics Data for Cancer Subtype Characterization.
Comput. Graph. Forum
Alexander Lex, Marc Streit, Hans-Jörg Schulz, Christian Partl, Dieter Schmalstieg, Peter J. Park, Nils Gehlenborg
2010 Misc conf
An information retrieval perspective on visualization of gene expression data with ontological annotation.
ICASSP
Jaakko Peltonen, Helena Aidos, Nils Gehlenborg, Alvis Brazma, Samuel Kaski
2009 J jnl
Prequips - an extensible software platform for integration, visualization and analysis of LC-MS/MS proteomics data.
Bioinform.
Nils Gehlenborg, Wei Yan, Inyoul Y. Lee, Hyuntae Yoo, Kay Nieselt, Daehee Hwang, Ruedi Aebersold, Leroy Hood
2009 J jnl
Probabilistic retrieval and visualization of biologically relevant microarray experiments.
Bioinform.
José Caldas, Nils Gehlenborg, Ali Faisal, Alvis Brazma, Samuel Kaski
2009 J jnl
Probabilistic retrieval and visualization of biologically relevant microarray experiments.
BMC Bioinform.
José Caldas, Nils Gehlenborg, Ali Faisal, Alvis Brazma, Samuel Kaski
2009 J jnl
The Prion Disease Database: a comprehensive transcriptome resource for systems biology research in prion diseases.
Database J. Biol. Databases Curation
Nils Gehlenborg, Daehee Hwang, Inyoul Y. Lee, Hyuntae Yoo, David Baxter, Brianne Petritis, Rose Pitstick, Bruz Marzolf, Stephen J. DeArmond, George Carlson, Leroy Hood
2009 J jnl
Visualization of large microarray experiments with space maps.
BMC Bioinform.
Nils Gehlenborg, Alvis Brazma
2008 J jnl
Highlights from the Fourth International Society for Computational Biology Student Council Symposium at the Sixteenth Annual International Conference on Intelligent Systems for Molecular Biology.
BMC Bioinform.
Lucia Peixoto, Nils Gehlenborg, Sarath Chandra Janga
2008 J jnl
Ten Simple Rules for Organizing a Scientific Meeting.
PLoS Comput. Biol.
Manuel Corpas, Nils Gehlenborg, Sarath Chandra Janga, Philip E. Bourne
2007 J jnl
Highlights from the Third International Society for Computational Biology Student Council Symposium at the Fifteenth Annual International Conference on Intelligent Systems for Molecular Biology.
BMC Bioinform.
Nils Gehlenborg, Manuel Corpas, Sarath Chandra Janga
2006 J jnl
Mayday-a microarray data analysis workbench.
Bioinform.
Janko Dietzsch, Nils Gehlenborg, Kay Nieselt
2005 J jnl
A Framework for Visualization of Microarray Data and Integrated Meta Information.
Inf. Vis.
Nils Gehlenborg, Janko Dietzsch, Kay Nieselt