Nils Blüthgen

19 papers Journal 18Unranked 1
YearRankTypeTitle / Venue / Authors
2024 J jnl
Quantitative modeling of signaling in aggressive B cell lymphoma unveils conserved core network.
PLoS Comput. Biol.
Bertram Klinger, Isabel Rausch, Anja Sieber, Helmut Kutz, Vanessa Kruse, Marieluise Kirchner, Philipp Mertins, Arnd Kieser, Nils Blüthgen, Dieter Kube
2024 J jnl
RUCova: Removal of Unwanted Covariance in mass cytometry data.
Bioinform.
Rosario Astaburuaga-García, Thomas Sell, Samet Mutlu, Anja Sieber, Kirsten Lauber, Nils Blüthgen
2021 J jnl
Neuroblastoma signalling models unveil combination therapies targeting feedback-mediated resistance.
PLoS Comput. Biol.
Mathurin Dorel, Bertram Klinger, Tommaso Mari, Joern Toedling, Eric Blanc, Clemens Messerschmidt, Michal Nadler-Holly, Matthias Ziehm, Anja Sieber, Falk Hertwig, Dieter Beule, Angelika Eggert, Johannes H. Schulte, Matthias Selbach, Nils Blüthgen
2020 J jnl
Identifiability and experimental design in perturbation studies.
Bioinform.
Torsten Gross, Nils Blüthgen
2020 J jnl
SPEED2: inferring upstream pathway activity from differential gene expression.
Nucleic Acids Res.
Mattias Rydenfelt, Bertram Klinger, Martina Klünemann, Nils Blüthgen
2019 J jnl
Robust network inference using response logic.
Bioinform.
Torsten Gross, Matthew Wongchenko, Yibing Yan, Nils Blüthgen
2018 J jnl
Comparative Network Reconstruction using mixed integer programming.
Bioinform.
Evert Bosdriesz, Anirudh Prahallad, Bertram Klinger, Anja Sieber, Astrid Bosma, René Bernards, Nils Blüthgen, Lodewyk F. A. Wessels
2018 J jnl
Modelling signalling networks from perturbation data.
Bioinform.
Mathurin Dorel, Bertram Klinger, Torsten Gross, Anja Sieber, Anirudh Prahallad, Evert Bosdriesz, Lodewyk F. A. Wessels, Nils Blüthgen
2017 J jnl
Sorting sums of binary decision summands.
CoRR
Torsten Gross, Nils Blüthgen
2015 J jnl
Analysis of impedance-based cellular growth assays.
Bioinform.
Franziska Witzel, Raphaela Fritsche-Guenther, Nadine Lehmann, Anja Sieber, Nils Blüthgen
2015 J jnl
Computer-assisted curation of a human regulatory core network from the biological literature.
Bioinform.
Philippe Thomas, Pawel Durek, Illés Solt, Bertram Klinger, Franziska Witzel, Pascal Schulthess, Yvonne Mayer, Domonkos Tikk, Nils Blüthgen, Ulf Leser
2010 J jnl
Discovering causal signaling pathways through gene-expression patterns.
Nucleic Acids Res.
Jignesh R. Parikh, Bertram Klinger, Yu Xia, Jarrod A. Marto, Nils Blüthgen
2010 J jnl
Targetfinder.org: a resource for systematic discovery of transcription factor target genes.
Nucleic Acids Res.
Szymon M. Kielbasa, Nils Blüthgen, Michael Fähling, Ralf Mrowka
2010 J jnl
TransFind - predicting transcriptional regulators for gene sets.
Nucleic Acids Res.
Szymon M. Kielbasa, Holger Klein, Helge G. Roider, Martin Vingron, Nils Blüthgen
2009 J jnl
Noise Management by Molecular Networks.
PLoS Comput. Biol.
Frank J. Bruggeman, Nils Blüthgen, Hans V. Westerhoff
2006 J jnl
Mathematical Modeling Identifies Inhibitors of Apoptosis as Mediators of Positive Feedback and Bistability.
PLoS Comput. Biol.
Stefan Legewie, Nils Blüthgen, Hanspeter Herzel
2005 J jnl
Ultrasensitization: Switch-Like Regulation of Cellular Signaling by Transcriptional Induction.
PLoS Comput. Biol.
Stefan Legewie, Nils Blüthgen, Reinhold Schäfer, Hanspeter Herzel
2004 — conf
Genome-wide Analysis of Functions Regulated by Sets of Transcription Factors.
German Conference on Bioinformatics
Szymon M. Kielbasa, Nils Blüthgen, Hanspeter Herzel
2004 J jnl
HOMGL - comparing genelists across species and with different accession numbers.
Bioinform.
Nils Blüthgen, Szymon M. Kielbasa, Branka Cajavec, Hanspeter Herzel