Nicola Neretti

14 papers B 1Journal 9Unranked 4
YearRankTypeTitle / Venue / Authors
2022 — conf
TADBay: A Bayesian Construction of Topologically Associated Domains.
BIBM
Carlos Soto, Darshan W. Bryner, Audrey Dalgarno, Nicola Neretti, Anuj Srivastava
2021 — conf
Representation of Chromosome Conformations Using a Shape Alphabet Across Modeling Methods.
BIBM
Carlos Soto, Audrey Dalgarno, Darshan W. Bryner, Benjamin McLaughlin, Nicola Neretti, Anuj Srivastava
2021 J jnl
Toward a Three-Dimensional Chromosome Shape Alphabet.
J. Comput. Biol.
Carlos Soto, Darshan W. Bryner, Nicola Neretti, Anuj Srivastava
2019 J jnl
Bayesian Estimation of Three-Dimensional Chromosomal Structure from Single-Cell Hi-C Data.
J. Comput. Biol.
Michael Rosenthal, Darshan W. Bryner, Fred W. Huffer, Shane Evans, Anuj Srivastava, Nicola Neretti
2017 J jnl
GINOM: A statistical framework for assessing interval overlap of multiple genomic features.
PLoS Comput. Biol.
Darshan W. Bryner, Stephen Criscione, Andrew Leith, Quyen Huynh, Fred W. Huffer, Nicola Neretti
2013 J jnl
CORaL: Comparison of Ranked Lists for Analysis of Gene Expression Data.
J. Comput. Biol.
Michael Antosh, David Fox, Leon N. Cooper, Nicola Neretti
2008 J jnl
MAP fusion method for superresolution of images with locally varying pixel quality.
Int. J. Imaging Syst. Technol.
Kio Kim, Nicola Neretti, Nathan Intrator
2008 J jnl
Reconstructing networks of pathways via significance analysis of their intersections.
BMC Bioinform.
Mirko Francesconi, Daniel Remondini, Nicola Neretti, John M. Sedivy, Leon N. Cooper, Ettore Verondini, Luciano Milanesi, Gastone C. Castellani
2007 J jnl
Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation.
BMC Bioinform.
Nicola Neretti, Daniel Remondini, Marc Tatar, John M. Sedivy, Michela Pierini, Dawn Mazzatti, Jonathan Powell, Claudio Franceschi, Gastone C. Castellani
2007 J jnl
Networks from Gene Expression Time Series: Characterization of Correlation Patterns.
Int. J. Bifurc. Chaos
Daniel Remondini, Nicola Neretti, Claudio Franceschi, Paolo Tieri, John M. Sedivy, Luciano Milanesi, Gastone C. Castellani
2006 B conf
Video Enhancement for Underwater Exploration Using Forward Looking Sonar.
ACIVS
Kio Kim, Nicola Neretti, Nathan Intrator
2004 J jnl
Adaptive pulse optimization for improved sonar range accuracy.
IEEE Signal Process. Lett.
Nicola Neretti, Nathan Intrator, Leon N. Cooper
2004 — conf
Image registration and mosaicing of noisy acoustic camera images.
ICECS
Kio Kim, Nathan Intrator, Nicola Neretti
2002 — conf
An adaptive approach to wavelet filters design.
NNSP
Nicola Neretti, Nathan Intrator