Nicholas J. Tustison

49 papers A* 2Journal 27Unranked 20

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	Automated Identification of Moderate-to-Severe Traumatic Brain Injury Lesions (AIMS-TBI) 2025 MICCAI Challenge. BraTS-Lighthouse/AIMS-TBI@MICCAI (2) Evelyn Deutscher, Nicholas J. Tustison, Adrian Onicas, Elisabeth A. Wilde, Matthew W. Pease, Spyridon Bakas, Emily L. Dennis
2025	J	`jnl`	Non-Negative Stiefel Approximating Flow: Orthogonalish Matrix Optimization for Interpretable Embeddings. CoRR Brian B. Avants, Nicholas J. Tustison, James R. Stone
2024	A*	`conf`	Multimodal Patient Representation Learning with Missing Modalities and Labels. ICLR Zhenbang Wu, Anant Dadu, Nicholas J. Tustison, Brian B. Avants, Mike A. Nalls, Jimeng Sun, Faraz Faghri
2021	J	`jnl`	Publisher Correction: Similarity-driven multi-view embeddings from high-dimensional biomedical data. Nat. Comput. Sci. Brian B. Avants, Nicholas J. Tustison, James R. Stone
2021	J	`jnl`	QU-BraTS: MICCAI BraTS 2020 Challenge on Quantifying Uncertainty in Brain Tumor Segmentation - Analysis of Ranking Metrics and Benchmarking Results. CoRR Raghav Mehta, Angelos Filos, Ujjwal Baid, Chiharu Sako, Richard McKinley, Michael Rebsamen, Katrin Dätwyler, Raphael Meier, Piotr Radojewski, Gowtham Krishnan Murugesan, Sahil S. Nalawade, Chandan Ganesh, Benjamin C. Wagner, Fang F. Yu, Baowei Fei, Ananth J. Madhuranthakam, Joseph A. Maldjian, Laura Alexandra Daza, Catalina Gómez Caballero, Pablo Arbeláez, Chengliang Dai, Shuo Wang, Hadrien Raynaud, Yuanhan Mo, Elsa D. Angelini, Yike Guo, Wenjia Bai, Subhashis Banerjee, Linmin Pei, Murat Ak, Sarahi Rosas-González, Ilyess Zemmoura, Clovis Tauber, Minh H. Vu, Tufve Nyholm, Tommy Löfstedt, Laura Mora Ballestar, Verónica Vilaplana, Hugh McHugh, Gonzalo D. Maso Talou, Alan Wang, Jay B. Patel, Ken Chang, Katharina Hoebel, Mishka Gidwani, Nishanth Thumbavanam Arun, Sharut Gupta, Mehak Aggarwal, Praveer Singh, Elizabeth R. Gerstner, Jayashree Kalpathy-Cramer, Nicolas Boutry, Alexis Huard, Lasitha Vidyaratne, Md Monibor Rahman, Khan M. Iftekharuddin, Joseph Chazalon, Élodie Puybareau, Guillaume Tochon, Jun Ma, Mariano Cabezas, Xavier Lladó, Arnau Oliver, Liliana Valencia, Sergi Valverde, Mehdi Amian, Mohammadreza Soltaninejad, Andriy Myronenko, Ali Hatamizadeh, Xue Feng, Quan Dou, Nicholas J. Tustison, Craig H. Meyer, Nisarg A. Shah, Sanjay N. Talbar, Marc-André Weber, Abhishek Mahajan, András Jakab, Roland Wiest, Hassan M. Fathallah-Shaykh, Arash Nazeri, Mikhail Milchenko, Daniel S. Marcus, Aikaterini Kotrotsou, Rivka Colen, John B. Freymann, Justin S. Kirby, Christos Davatzikos, Bjoern H. Menze, Spyridon Bakas, Yarin Gal, Tal Arbel
2021	J	`jnl`	Similarity-driven multi-view embeddings from high-dimensional biomedical data. Nat. Comput. Sci. Brian B. Avants, Nicholas J. Tustison, James R. Stone
2020	J	`jnl`	Brain Tumor Segmentation Using an Ensemble of 3D U-Nets and Overall Survival Prediction Using Radiomic Features. Frontiers Comput. Neurosci. Xue Feng, Nicholas J. Tustison, Sohil H. Patel, Craig H. Meyer
2020	—	`conf`	Deep Volumetric Feature Encoding for Biomedical Images. WBIR Brian B. Avants, Elliot Greenblatt, Jacob Hesterman, Nicholas J. Tustison
2020	J	`jnl`	Interpretable, similarity-driven multi-view embeddings from high-dimensional biomedical data. CoRR Brian B. Avants, Nicholas J. Tustison, James R. Stone
2020	J	`jnl`	Longitudinal ComBat: A method for harmonizing longitudinal multi-scanner imaging data. NeuroImage Joanne C. Beer, Nicholas J. Tustison, Philip A. Cook, Christos Davatzikos, Yvette I. Sheline, Russell T. Shinohara, Kristin A. Linn
2019	—	`conf`	Brain Tumor Segmentation with Uncertainty Estimation and Overall Survival Prediction. BrainLes@MICCAI (1) Xue Feng, Quan Dou, Nicholas J. Tustison, Craig H. Meyer
2019	—	`conf`	Deformable Registration of Whole Brain Zebrafish Microscopy Using an Implementation of the Flash Algorithm Within Ants. ISBI Greg M. Fleishman, Miaomiao Zhang, Nicholas J. Tustison, Isabel Espinosa-Medina, Yu Mu, Khaled Khairy, Misha B. Ahrens
2019	J	`jnl`	Multi-Site Meta-Analysis of Morphometry. IEEE ACM Trans. Comput. Biol. Bioinform. Neda Jahanshad, Joshua Faskowitz, Gennady V. Roshchupkin, Derrek P. Hibar, Boris A. Gutman, Nicholas J. Tustison, Hieab H. H. Adams, Wiro J. Niessen, Meike W. Vernooij, Mohammad Arfan Ikram, Marcel P. Zwiers, Alejandro Arias-Vasquez, Barbara Franke, Jennifer L. Kroll, Benson Mwangi, Jair C. Soares, Alex Ing, Sylvane Desrivières, Gunter Schumann, Narelle K. Hansell, Greig I. de Zubicaray, Katie L. McMahon, Nicholas G. Martin, Margaret J. Wright, Paul M. Thompson
2018	—	`conf`	Brain Tumor Segmentation Using an Ensemble of 3D U-Nets and Overall Survival Prediction Using Radiomic Features. BrainLes@MICCAI (2) Xue Feng, Nicholas J. Tustison, Craig H. Meyer
2018	J	`jnl`	Brain Tumor Segmentation using an Ensemble of 3D U-Nets and Overall Survival Prediction using Radiomic Features. CoRR Xue Feng, Nicholas J. Tustison, Craig H. Meyer
2017	J	`jnl`	An Open Benchmark Challenge for Motion Correction of Myocardial Perfusion MRI. IEEE J. Biomed. Health Informatics Beau Pontre, Brett R. Cowan, Edward DiBella, Sancgeetha Kulaseharan, Devavrat Likhite, Nils Noorman, Lennart Tautz, Nicholas J. Tustison, Gert Wollny, Alistair A. Young, Avan Suinesiaputra
2017	J	`jnl`	Multivariate modeling using quantitative CT metrics may improve accuracy of diagnosis of bronchiolitis obliterans syndrome after lung transplantation. Comput. Biol. Medicine Eduardo Barbosa Jr., Scott Simpson, James C. Lee, Nicholas J. Tustison, James C. Gee, Haochang Shou
2015	J	`jnl`	Neuroinformatics and the The Insight ToolKit. Frontiers Neuroinformatics Brian B. Avants, Hans J. Johnson, Nicholas J. Tustison
2015	J	`jnl`	Optimal Symmetric Multimodal Templates and Concatenated Random Forests for Supervised Brain Tumor Segmentation (Simplified) with ANTsR. Neuroinformatics Nicholas J. Tustison, K. L. Shrinidhi, Max Wintermark, Christopher R. Durst, Benjamin M. Kandel, James C. Gee, Murray C. Grossman, Brian B. Avants
2015	J	`jnl`	The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS). IEEE Trans. Medical Imaging Bjoern H. Menze, András Jakab, Stefan Bauer, Jayashree Kalpathy-Cramer, Keyvan Farahani, Justin S. Kirby, Yuliya Burren, Nicole Porz, Johannes Slotboom, Roland Wiest, Levente Lanczi, Elizabeth R. Gerstner, Marc-André Weber, Tal Arbel, Brian B. Avants, Nicholas Ayache, Patricia Buendia, D. Louis Collins, Nicolas Cordier, Jason J. Corso, Antonio Criminisi, Tilak Das, Herve Delingette, Çagatay Demiralp, Christopher R. Durst, Michel Dojat, Senan Doyle, Joana Festa, Florence Forbes, Ezequiel Geremia, Ben Glocker, Polina Golland, Xiaotao Guo, Andac Hamamci, Khan M. Iftekharuddin, Raj Jena, Nigel M. John, Ender Konukoglu, Danial Lashkari, José Antonio Mariz, Raphael Meier, Sérgio Pereira, Doina Precup, Stephen J. Price, Tammy Riklin Raviv, Syed M. S. Reza, Michael T. Ryan, Duygu Sarikaya, Lawrence H. Schwartz, Hoo-Chang Shin, Jamie Shotton, Carlos A. Silva, Nuno J. Sousa, Nagesh K. Subbanna, Gábor Székely, Thomas J. Taylor, Owen M. Thomas, Nicholas J. Tustison, Gözde B. Ünal, Flor Vasseur, Max Wintermark, Dong Hye Ye, Liang Zhao, Binsheng Zhao, Darko Zikic, Marcel Prastawa, Mauricio Reyes, Koen Van Leemput
2014	—	`conf`	Advanced Normalization Tools for Cardiac Motion Correction. STACOM Nicholas J. Tustison, Yang Yang, Michael Salerno
2014	J	`jnl`	Large-scale evaluation of ANTs and FreeSurfer cortical thickness measurements. NeuroImage Nicholas J. Tustison, Philip A. Cook, Arno Klein, Gang Song, Sandhitsu R. Das, Jeffrey T. Duda, Benjamin M. Kandel, Niels van Strien, James R. Stone, James C. Gee, Brian B. Avants
2014	J	`jnl`	The Insight ToolKit image registration framework. Frontiers Neuroinformatics Brian B. Avants, Nicholas J. Tustison, James C. Gee, Gang Song, Baohua Wu, Michael Stauffer
2013	J	`jnl`	Explicit B-spline regularization in diffeomorphic image registration. Frontiers Neuroinformatics Nicholas J. Tustison, Brian B. Avants
2012	—	`conf`	A Unified Image Registration Framework for ITK. WBIR Brian B. Avants, Nicholas J. Tustison, Gang Song, Baohua Wu, Michael Stauffer, Matthew McCormick, Hans J. Johnson, James C. Gee
2012	—	`conf`	Diffeomorphic Directly Manipulated Free-Form Deformation Image Registration via Vector Field Flows. WBIR Nicholas J. Tustison, Brian B. Avants
2011	J	`jnl`	A reproducible evaluation of ANTs similarity metric performance in brain image registration. NeuroImage Brian B. Avants, Nicholas J. Tustison, Gang Song, Philip A. Cook, Arno Klein, James C. Gee
2011	J	`jnl`	An Open Source Multivariate Framework for n-Tissue Segmentation with Evaluation on Public Data. Neuroinformatics Brian B. Avants, Nicholas J. Tustison, Jue Wu, Philip A. Cook, James C. Gee
2011	J	`jnl`	Evaluation of Registration Methods on Thoracic CT: The EMPIRE10 Challenge. IEEE Trans. Medical Imaging Keelin Murphy, Bram van Ginneken, Joseph M. Reinhardt, Sven Kabus, Kai Ding, Xiang Deng, Kunlin Cao, Kaifang Du, Gary E. Christensen, Vincent Garcia, Tom Vercauteren, Nicholas Ayache, Olivier Commowick, Grégoire Malandain, Ben Glocker, Nikos Paragios, Nassir Navab, Vladlena Gorbunova, Jon Sporring, Marleen de Bruijne, Xiao Han, Mattias P. Heinrich, Julia A. Schnabel, Mark Jenkinson, Cristian Lorenz, Marc Modat, Jamie McClelland, Sébastien Ourselin, Sascha E. A. Muenzing, Max A. Viergever, Dante De Nigris, D. Louis Collins, Tal Arbel, Marta Peroni, Rui Li, Gregory C. Sharp, Alexander Schmidt-Richberg, Jan Ehrhardt, René Werner, Dirk Smeets, Dirk Loeckx, Gang Song, Nicholas J. Tustison, Brian B. Avants, James C. Gee, Marius Staring, Stefan Klein, Berend C. Stoel, Martin Urschler, Manuel Werlberger, Jef Vandemeulebroucke, Simon Rit, David Sarrut, Josien P. W. Pluim
2011	J	`jnl`	Point Set Registration Using Havrda-Charvat-Tsallis Entropy Measures. IEEE Trans. Medical Imaging Nicholas J. Tustison, Suyash P. Awate, Gang Song, Tessa Sundaram Cook, James C. Gee
2011	J	`jnl`	Topological Well-Composedness and Glamorous Glue: A Digital Gluing Algorithm for Topologically Constrained Front Propagation. IEEE Trans. Image Process. Nicholas J. Tustison, Brian B. Avants, Marcelo Siqueira, James C. Gee
2010	J	`jnl`	N4ITK: Improved N3 Bias Correction. IEEE Trans. Medical Imaging Nicholas J. Tustison, Brian B. Avants, Philip A. Cook, Yuanjie Zheng, Alexander Egan, Paul A. Yushkevich, James C. Gee
2010	—	`conf`	Sparse Unbiased Analysis of Anatomical Variance in Longitudinal Imaging. MICCAI (1) Brian B. Avants, Philip A. Cook, Corey McMillan, Murray Grossman, Nicholas J. Tustison, Yuanjie Zheng, James C. Gee
2009	—	`conf`	A New Information-Theoretic Measure to Control the Robustness-Sensitivity Trade-Off for DMFFD Point-Set Registration. IPMI Nicholas J. Tustison, Suyash P. Awate, Gang Song, Tessa Sundaram Cook, James C. Gee
2009	—	`conf`	Computational Analysis of HRCT Images for Characterization and Differentiation of ILD and COPD. ISBI Gang Song, Eduardo Barbosa Jr., Nicholas J. Tustison, James C. Gee, Warren B. Gefter, Maryl Kreider, Drew A. Torigian
2009	J	`jnl`	Directly Manipulated Free-Form Deformation Image Registration. IEEE Trans. Image Process. Nicholas J. Tustison, Brian B. Avants, James C. Gee
2008	—	`conf`	Point-set registration of tagged HE-3 images using a structurally-based Jensen-Shannon divergence measure within a deterministic annealing framework. ISBI Nicholas J. Tustison, Suyash P. Awate, Talissa A. Altes, James C. Gee, Jing Cai, G. Wilson Miller, Eduard E. de Lange, John P. Mugler III
2008	J	`jnl`	Topological Repairing of 3D Digital Images. J. Math. Imaging Vis. Marcelo Siqueira, Longin Jan Latecki, Nicholas J. Tustison, Jean H. Gallier, James C. Gee
2007	—	`conf`	How Do Registration Parameters Affect Quantitation of Lung Kinematics? MICCAI (1) Tessa Sundaram Cook, Nicholas J. Tustison, Jürgen Biederer, Ralf Tetzlaff, James C. Gee
2007	A*	`conf`	Improved FFD B-Spline Image Registration. ICCV Nicholas J. Tustison, Brian B. Avants, James C. Gee
2007	—	`conf`	Pulmonary Kinematics from Hyperpolarized Helium-3 Tagged Magnetic Resonance Imaging. ISBI Nicholas J. Tustison, Talissa A. Altes, James C. Gee, Jing Cai, Eduard E. de Lange, John P. Mugler III
2006	—	`conf`	A Generalization of Free-Form Deformation Image Registration Within the ITK Finite Element Framework. WBIR Nicholas J. Tustison, Brian B. Avants, Tessa A. Sundaram, Jeffrey T. Duda, James C. Gee
2006	—	`conf`	Adaptive graph cuts with tissue priors for brain MRI segmentation. ISBI Zhuang Song, Nicholas J. Tustison, Brian B. Avants, James C. Gee
2006	J	`jnl`	Biventricular myocardial strains via nonrigid registration of AnFigatomical NURBS models. IEEE Trans. Medical Imaging Nicholas J. Tustison, Amir A. Amini
2006	—	`conf`	Generalized MIAR Nicholas J. Tustison, James C. Gee
2006	—	`conf`	Integrated Graph Cuts for Brain MRI Segmentation. MICCAI (2) Zhuang Song, Nicholas J. Tustison, Brian B. Avants, James C. Gee
2004	—	`conf`	Biventricular Myocardial Kinematics Based on Tagged MRI from Anatomical NURBS Models. CVPR (2) Nicholas J. Tustison, Dana Abendschein, Amir A. Amini
2003	J	`jnl`	Myocardial kinematics from tagged MRI based on a 4-D B-spline model. IEEE Trans. Biomed. Eng. Nicholas J. Tustison, Victor G. Dávila-Román, Amir A. Amini
2002	—	`conf`	Myocardial Strain Imaging with Tagged MRI. ICPR (1) Nicholas J. Tustison, Dana Abendschein, Victor G. Dávila-Román, Amir A. Amini