Nicholas J. Schork

19 papers B 1Misc 2Journal 15

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Detecting Boolean Asymmetric Relationships With a Loop Counting Technique and its Implications for Analyzing Heterogeneity Within Gene Expression Datasets. IEEE Trans. Comput. Biol. Bioinform. Haosheng Zhou, Wei Lin, Sergio R. Labra, Stuart A. Lipton, Jeremy A. Elman, Nicholas J. Schork, Aaditya V. Rangan
2023	J	`jnl`	A time-series analysis of blood-based biomarkers within a 25-year longitudinal dolphin cohort. PLoS Comput. Biol. Aaditya V. Rangan, Caroline C. McGrouther, Nivedita Bhadra, Stephanie Venn-Watson, Eric D. Jensen, Nicholas J. Schork
2020	J	`jnl`	Editorial: Creating Evidence From Real World Patient Digital Data. Frontiers Comput. Sci. Jane Nikles, Eric J. Daza, Suzanne McDonald, Eric B. Hekler, Nicholas J. Schork
2020	J	`jnl`	Optimizing Aggregated N-Of-1 Trial Designs for Predictive Biomarker Validation: Statistical Methods and Theoretical Findings. Frontiers Digit. Health Rebecca C. Hendrickson, Ronald G. Thomas, Nicholas J. Schork, Murray A. Raskind
2019	J	`jnl`	Artificial intelligence and machine learning in clinical development: a translational perspective. npj Digit. Medicine Pratik Shah, Francis Kendall, Sean Khozin, Ryan Goosen, Jianying Hu, Jason M. Laramie, Michael Ringel, Nicholas J. Schork
2019	J	`jnl`	Rare variant phasing using paired tumor: normal sequence data. BMC Bioinform. Alexandra R. Buckley, Trey Ideker, Hannah Carter, Nicholas J. Schork
2018	J	`jnl`	A loop-counting method for covariate-corrected low-rank biclustering of gene-expression and genome-wide association study data. PLoS Comput. Biol. Aaditya V. Rangan, Caroline C. McGrouther, John Kelsoe, Nicholas J. Schork, Eli Stahl, Qian Zhu, Arjun Krishnan, Vicky Yao, Olga G. Troyanskaya, Seda Bilaloglu, Preeti Raghavan, Sarah Bergen, Anders Juréus, Mikael Landen
2017	J	`jnl`	Cell type discovery and representation in the era of high-content single cell phenotyping. BMC Bioinform. Trygve E. Bakken, Lindsay G. Cowell, Brian D. Aevermann, Mark Novotny, Rebecca D. Hodge, Jeremy A. Miller, Alexandra Lee, Ivan Chang, Jamison M. McCorrison, Bali Pulendran, Yu Qian, Nicholas J. Schork, Roger S. Lasken, Ed S. Lein, Richard H. Scheuermann
2017	Misc	`conf`	Production of a Preliminary Quality Control Pipeline for Single Nuclei RNA-Seq and Its Application in the Analysis of Cell Type Diversity of Post-Mortem Human Brain Neocortex. PSB Brian D. Aevermann, Jamison M. McCorrison, Pratap Venepally, Rebecca D. Hodge, Trygve E. Bakken, Jeremy A. Miller, Mark Novotny, Danny N. Tran, Francisco Diez-Fuertes, Lena Christiansen, Fan Zhang, Frank Steemers, Roger S. Lasken, Ed S. Lein, Nicholas J. Schork, Richard H. Scheuermann
2016	J	`jnl`	The Pediatric Imaging, Neurocognition, and Genetics (PING) Data Repository. NeuroImage Terry L. Jernigan, Timothy T. Brown, Donald J. Hagler Jr., Natacha Akshoomoff, Hauke Bartsch, Erik Newman, Wesley K. Thompson, Cinnamon S. Bloss, Sarah S. Murray, Nicholas J. Schork, David N. Kennedy, Joshua M. Kuperman, Connor McCabe, Yoonho Chung, Ondrej Libiger, Melanie Maddox, B. J. Casey, Linda Chang, Thomas Ernst, Jean A. Frazier, Jeffrey R. Gruen, Elizabeth R. Sowell, Tal Kenet, Walter E. Kaufmann, Stewart Mostofsky, David G. Amaral, Anders M. Dale
2015	J	`jnl`	Group-based variant calling leveraging next-generation supercomputing for large-scale whole-genome sequencing studies. BMC Bioinform. Kristopher Standish, Tristan M. Carland, Glenn K. Lockwood, Wayne Pfeiffer, Mahidhar Tatineni, C. Huang, Sarah Lamberth, Yauheniya Cherkas, Carrie Brodmerkel, Ed Jaeger, Lance Smith, Gunaretnam Rajagopal, Mark Curran, Nicholas J. Schork
2011	Misc	`conf`	An Application and Empirical Comparison of Statistical Analysis Methods for Associating Rare Variants to a Complex Phenotype. Pacific Symposium on Biocomputing Vikas Bansal, Ondrej Libiger, Ali Torkamani, Nicholas J. Schork
2010	J	`jnl`	A Covering Method for Detecting Genetic Associations between Rare Variants and Common Phenotypes. PLoS Comput. Biol. Gaurav Bhatia, Vikas Bansal, Olivier Harismendy, Nicholas J. Schork, Eric J. Topol, Kelly A. Frazer, Vineet Bafna
2010	J	`jnl`	The VA Hypertension Primary Care Longitudinal Cohort: Electronic medical records in the post-genomic era. Health Informatics J. Rany M. Salem, Braj Pandey, Erin Richard, Maple M. Fung, Erin P. Garcia, Victoria H. Brophy, Nicholas J. Schork, Daniel T. O'Connor, Vibha Bhatnagar
2009	J	`jnl`	Prestige centrality-based functional outlier detection in gene expression analysis. Bioinform. Ali Torkamani, Nicholas J. Schork
2008	J	`jnl`	Predicting functional regulatory polymorphisms. Bioinform. Ali Torkamani, Nicholas J. Schork
2007	J	`jnl`	Accurate prediction of deleterious protein kinase polymorphisms. Bioinform. Ali Torkamani, Nicholas J. Schork
1999	B	`conf`	Whole genome association studies in humans (abstract). RECOMB Daniel Cohen, Marta Blumenfeld, Ilya Chumakov, Nicholas J. Schork
1994	—	`—`	Advances in the genetic-epidemiologic analysis of complex phenotypes. Nicholas J. Schork