Nicholas J. Dobbins

19 papers Misc 1Journal 16Unranked 2
YearRankTypeTitle / Venue / Authors
2025 J jnl
Automated Survey Collection with LLM-based Conversational Agents.
CoRR
Kurmanbek Kaiyrbekov, Nicholas J. Dobbins, Sean D. Mooney
2025 J jnl
Large Language Model-Based Agents for Automated Research Reproducibility: An Exploratory Study in Alzheimer's Disease.
CoRR
Nicholas J. Dobbins, Christelle Xiong, Kristine Lan, Meliha Yetisgen
2024 — conf
Extracting Social Determinants of Health from Pediatric Patient Notes Using Large Language Models: Novel Corpus and Methods.
LREC/COLING
Yujuan Fu, Giridhar Kaushik Ramachandran, Nicholas J. Dobbins, Namu Park, Michael Leu, Abby R. Rosenberg, Kevin Lybarger, Fei Xia, Özlem Uzuner, Meliha Yetisgen
2024 J jnl
Extracting Social Determinants of Health from Pediatric Patient Notes Using Large Language Models: Novel Corpus and Methods.
CoRR
Yujuan Fu, Giridhar Kaushik Ramachandran, Nicholas J. Dobbins, Namu Park, Michael Leu, Abby R. Rosenberg, Kevin Lybarger, Fei Xia, Özlem Uzuner, Meliha Yetisgen
2024 J jnl
Generalizable and Scalable Multistage Biomedical Concept Normalization Leveraging Large Language Models.
CoRR
Nicholas J. Dobbins
2024 J jnl
Towards cross-application model-agnostic federated cohort discovery.
J. Am. Medical Informatics Assoc.
Nicholas J. Dobbins, Michele Morris, Eugene Sadhu, Douglas MacFadden, Marc-Danie Nazaire, William Simons, Griffin M. Weber, Shawn N. Murphy, Shyam Visweswaran
2023 J jnl
LeafAI: query generator for clinical cohort discovery rivaling a human programmer.
CoRR
Nicholas J. Dobbins, Bin Han, Weipeng Zhou, Kristine Lan, H. Nina Kim, Robert D. Harrington, Özlem Uzuner, Meliha Yetisgen
2023 J jnl
LeafAI: query generator for clinical cohort discovery rivaling a human programmer.
J. Am. Medical Informatics Assoc.
Nicholas J. Dobbins, Bin Han, Weipeng Zhou, Kristine Lan, H. Nina Kim, Robert D. Harrington, Özlem Uzuner, Meliha Yetisgen
2023 J jnl
Leveraging natural language processing to augment structured social determinants of health data in the electronic health record.
J. Am. Medical Informatics Assoc.
Kevin Lybarger, Nicholas J. Dobbins, Ritche Long, Angad P. Singh, Patrick Wedgeworth, Özlem Uzuner, Meliha Yetisgen
2023 — conf
Prompt-based Extraction of Social Determinants of Health Using Few-shot Learning.
ClinicalNLP@ACL
Giridhar Kaushik Ramachandran, Yujuan Fu, Bin Han, Kevin Lybarger, Nicholas J. Dobbins, Özlem Uzuner, Meliha Yetisgen
2023 J jnl
Prompt-based Extraction of Social Determinants of Health Using Few-shot Learning.
CoRR
Giridhar Kaushik Ramachandran, Yujuan Fu, Bin Han, Kevin Lybarger, Nicholas J. Dobbins, Özlem Uzuner, Meliha Yetisgen
2022 J jnl
Leveraging Natural Language Processing to Augment Structured Social Determinants of Health Data in the Electronic Health Record.
CoRR
Kevin Lybarger, Nicholas J. Dobbins, Ritche Long, Angad P. Singh, Patrick Wedgeworth, Özlem Ozuner, Meliha Yetisgen
2022 J jnl
The Leaf Clinical Trials Corpus: a new resource for query generation from clinical trial eligibility criteria.
CoRR
Nicholas J. Dobbins, Tony Mullen, Özlem Uzuner, Meliha Yetisgen
2022 J jnl
The NLP Sandbox: an efficient model-to-data system to enable federated and unbiased evaluation of clinical NLP models.
CoRR
Yao Yan, Thomas Yu, Kathleen Muenzen, Sijia Liu, Connor Boyle, George Koslowski, Jiaxin Zheng, Nicholas J. Dobbins, Clement Essien, Hongfang Liu, Larsson Omberg, Meliha Yestigen, Bradley Taylor, James A. Eddy, Justin Guinney, Sean D. Mooney, Thomas Schaffter
2021 Misc conf
Extracting Patient-level Social Determinants of Health into the OMOP Common Data Model.
AMIA
Jimmy Phuong, Elizabeth Zampino, Nicholas J. Dobbins, Juan Espinoza, Daniella Meeker, Heidi Spratt, Charisse R. Madlock-Brown, Nicole Gray Weiskopf, Adam B. Wilcox
2021 J jnl
Performance of Automatic De-identification Across Different Note Types.
CoRR
Nicholas J. Dobbins, David Wayne, Kahyun Lee, Özlem Uzuner, Meliha Yetisgen
2021 J jnl
Transferability of Neural Network-based De-identification Systems.
CoRR
Kahyun Lee, Nicholas J. Dobbins, Bridget T. McInnes, Meliha Yetisgen, Özlem Uzuner
2021 J jnl
Transferability of neural network clinical deidentification systems.
J. Am. Medical Informatics Assoc.
Kahyun Lee, Nicholas J. Dobbins, Bridget T. McInnes, Meliha Yetisgen, Özlem Uzuner
2020 J jnl
Leaf: an open-source, model-agnostic, data-driven web application for cohort discovery and translational biomedical research.
J. Am. Medical Informatics Assoc.
Nicholas J. Dobbins, Clifford H. Spital, Robert A. Black, Jason M. Morrison, Bas de Veer, Elizabeth Zampino, Robert D. Harrington, Bethene D. Britt, Kari A. Stephens, Adam B. Wilcox, Peter Tarczy-Hornoch, Sean D. Mooney