Neil R. Clark - RankMe

12 papers Misc 1Journal 9Unranked 2

Year	Rank	Type	Title / Venue / Authors
2018	Misc	`conf`	Cell-specific prediction and application of drug-induced gene expression . PSB Rachel Hodos, Ping Zhang, Hao-Chih Lee, Qiaonan Duan, Zichen Wang, Neil R. Clark, Avi Ma'ayan, Fei Wang, Brian A. Kidd, Jianying Hu, David A. Sontag, Joel Dudley
2016	J	`jnl`	Drug-induced adverse events prediction with the LINCS L1000 data. Bioinform. Zichen Wang, Neil R. Clark, Avi Ma'ayan
2016	J	`jnl`	Large Collection of Diverse Gene Set Search Queries Recapitulate Known Protein-Protein Interactions and Gene-Gene Functional Associations. CoRR Avi Ma'ayan, Neil R. Clark
2015	J	`jnl`	Dynamics of the discovery process of protein-protein interactions from low content studies. BMC Syst. Biol. Zichen Wang, Neil R. Clark, Avi Ma'ayan
2015	—	`conf`	Principle Angle Enrichment Analysis (PAEA): Dimensionally reduced multivariate gene set enrichment analysis tool. BIBM Neil R. Clark, Maciej Szymkiewicz, Zichen Wang, Caroline D. Monteiro, Matthew R. Jones, Avi Ma'ayan
2014	J	`jnl`	The characteristic direction: a geometrical approach to identify differentially expressed genes. BMC Bioinform. Neil R. Clark, Kevin S. Hu, Axel S. Feldmann, Yan Kou, Edward Y. Chen, Qiaonan Duan, Avi Ma'ayan
2013	—	`conf`	ChEA2: Gene-Set Libraries from ChIP-X Experiments to Decode the Transcription Regulome. CD-ARES Yan Kou, Edward Y. Chen, Neil R. Clark, Qiaonan Duan, Christopher M. Tan, Avi Ma'ayan
2013	J	`jnl`	Enrichr: interactive and collaborative HTML5 gene list enrichment analysis tool. BMC Bioinform. Edward Y. Chen, Christopher M. Tan, Yan Kou, Qiaonan Duan, Zichen Wang, Gabriela Vaz Meirelles, Neil R. Clark, Avi Ma'ayan
2013	J	`jnl`	Network2Canvas: network visualization on a canvas with enrichment analysis. Bioinform. Christopher M. Tan, Edward Y. Chen, Ruth Dannenfelser, Neil R. Clark, Avi Ma'ayan
2012	J	`jnl`	Genes2FANs: connecting genes through functional association networks. BMC Bioinform. Ruth Dannenfelser, Neil R. Clark, Avi Ma'ayan
2012	J	`jnl`	Sets2Networks: network inference from repeated observations of sets. BMC Syst. Biol. Neil R. Clark, Ruth Dannenfelser, Christopher M. Tan, Michael E. Komosinski, Avi Ma'ayan
2011	J	`jnl`	Recovering Protein-Protein and Domain-Domain Interactions from Aggregation of IP-MS Proteomics of Coregulator Complexes. PLoS Comput. Biol. Amin R. Mazloom, Ruth Dannenfelser, Neil R. Clark, Arsen V. Grigoryan, Kathryn M. Linder, Timothy Cardozo, Julia C. Bond, Aislyn D. W. Boran, Ravi Iyengar, Anna Malovannaya, Rainer B. Lanz, Avi Ma'ayan