Ned S. Wingreen

20 papers Journal 20
YearRankTypeTitle / Venue / Authors
2024 J jnl
Data-driven Discovery of Biophysical T Cell Receptor Co-specificity Rules.
CoRR
Andrew G. T. Pyo, Yuta Nagano, Martina Milighetti, James Henderson, Curtis G. Callan Jr., Benny Chain, Ned S. Wingreen, Andreas Tiffeau-Mayer
2022 J jnl
Global and gene-specific translational regulation in Escherichia coli across different conditions.
PLoS Comput. Biol.
Di Zhang, Sophia Hsin-Jung Li, Christopher G. King, Ned S. Wingreen, Zemer Gitai, Zhiyuan Li
2021 J jnl
Motif-pattern dependence of biomolecular phase separation driven by specific interactions.
PLoS Comput. Biol.
Benjamin G. Weiner, Andrew G. T. Pyo, Yigal Meir, Ned S. Wingreen
2020 J jnl
Implications of localized charge for human influenza A H1N1 hemagglutinin evolution: Insights from deep mutational scans.
PLoS Comput. Biol.
Chadi M. Saad-Roy, Nimalan Arinaminpathy, Ned S. Wingreen, Simon A. Levin, Joshua M. Akey, Bryan T. Grenfell
2020 J jnl
Modeling microbial metabolic trade-offs in a chemostat.
PLoS Comput. Biol.
Zhiyuan Li, Bo Liu, Sophia Hsin-Jung Li, Christopher G. King, Zemer Gitai, Ned S. Wingreen
2019 J jnl
Revealing evolutionary constraints on proteins through sequence analysis.
PLoS Comput. Biol.
Shou-Wen Wang, Anne-Florence Bitbol, Ned S. Wingreen
2015 J jnl
Established Microbial Colonies Can Survive Type VI Secretion Assault.
PLoS Comput. Biol.
David Bruce Borenstein, Peter Ringel, Marek Basler, Ned S. Wingreen
2015 J jnl
Optimal Census by Quorum Sensing.
PLoS Comput. Biol.
Thibaud O. Taillefumier, Ned S. Wingreen
2014 J jnl
The Role of Membrane-Mediated Interactions in the Assembly and Architecture of Chemoreceptor Lattices.
PLoS Comput. Biol.
Christoph A. Haselwandter, Ned S. Wingreen
2011 J jnl
Does the Potential for Chaos Constrain the Embryonic Cell-Cycle Oscillator?
PLoS Comput. Biol.
R. Scott McIsaac, Kerwyn Casey Huang, Anirvan M. Sengupta, Ned S. Wingreen
2011 J jnl
Filament Depolymerization Can Explain Chromosome Pulling during Bacterial Mitosis.
PLoS Comput. Biol.
Edward J. Banigan, Michael A. Gelbart, Zemer Gitai, Ned S. Wingreen, Andrea J. Liu
2010 J jnl
Achieving Optimal Growth through Product Feedback Inhibition in Metabolism.
PLoS Comput. Biol.
Sidhartha Goyal, Jie Yuan, Thomas Chen, Joshua D. Rabinowitz, Ned S. Wingreen
2010 J jnl
Evaluating Gene Expression Dynamics Using Pairwise RNA FISH Data.
PLoS Comput. Biol.
Matthieu Wyart, David Botstein, Ned S. Wingreen
2009 J jnl
Steps in the Bacterial Flagellar Motor.
PLoS Comput. Biol.
Thierry Mora, Howard Yu, Yoshiyuki Sowa, Ned S. Wingreen
2008 J jnl
An improved pairwise decomposable finite-difference Poisson-Boltzmann method for computational protein design.
J. Comput. Chem.
Christina L. Vizcarra, Naigong Zhang, Shannon A. Marshall, Ned S. Wingreen, Chen Zeng, Stephen L. Mayo
2008 J jnl
Chemotaxis in
PLoS Comput. Biol.
Clinton H. Hansen, Robert G. Endres, Ned S. Wingreen
2008 J jnl
PSICIC: Noise and Asymmetry in Bacterial Division Revealed by Computational Image Analysis at Sub-Pixel Resolution.
PLoS Comput. Biol.
Jonathan M. Guberman, Allison Fay, Jonathan Dworkin, Ned S. Wingreen, Zemer Gitai
2007 J jnl
Chemotaxis Receptor Complexes: From Signaling to Assembly.
PLoS Comput. Biol.
Robert G. Endres, Joseph J. Falke, Ned S. Wingreen
2006 J jnl
A Curvature-Mediated Mechanism for Localization of Lipids to Bacterial Poles.
PLoS Comput. Biol.
Kerwyn Casey Huang, Ranjan Mukhopadhyay, Ned S. Wingreen
2005 J jnl
Finding regulatory modules through large-scale gene-expression data analysis.
Bioinform.
M. Kloster, Chao Tang, Ned S. Wingreen