Navid Alemi Koohbanani

30 papers Journal 19Unranked 10
YearRankTypeTitle / Venue / Authors
2024 J jnl
Medical Image Anal.
Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Ali Gooya, Derek R. Magee
2024 J jnl
IEEE J. Biomed. Health Informatics
Yiping Jiao, Jeroen van der Laak, Shadi Albarqouni, Zhang Li, Tao Tan, Abhir Bhalerao, Shenghua Cheng, Jiabo Ma, John Pocock, Josien P. W. Pluim, Navid Alemi Koohbanani, Raja Muhammad Saad Bashir, Shan-E-Ahmed Raza, Sibo Liu, Simon Graham, Suzanne C. Wetstein, Syed Ali Khurram, Xiuli Liu, Nasir M. Rajpoot, Mitko Veta, Francesco Ciompi
2023 J jnl
CoRR
Yiping Jiao, Jeroen van der Laak, Shadi Albarqouni, Zhang Li, Tao Tan, Abhir Bhalerao, Jiabo Ma, Jiamei Sun, Johnathon Pocock, Josien P. W. Pluim, Navid Alemi Koohbanani, Raja Muhammad Saad Bashir, Shan E Ahmed Raza, Sibo Liu, Simon Graham, Suzanne C. Wetstein, Syed Ali Khurram, Thomas Watson, Nasir M. Rajpoot, Mitko Veta, Francesco Ciompi
2023 conf
GRAIL/OCELOT@MICCAI
Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Derek R. Magee
2022 conf
MIDL
Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Ali Gooya
2022 J jnl
CoRR
Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Ali Gooya
2021 conf
COMPAY@MICCAI
Hammam M. AlGhamdia, Navid Alemi Koohbanani, Nasir M. Rajpoot, Shan E Ahmed Raza
2021 conf
ICCVW
Mostafa Jahanifar, Neda Zamani Tajeddin, Navid Alemi Koohbanani, Nasir M. Rajpoot
2021 J jnl
CoRR
Mostafa Jahanifar, Neda Zamani Tajeddin, Navid Alemi Koohbanani, Nasir M. Rajpoot
2021 J jnl
IEEE Trans. Medical Imaging
Navid Alemi Koohbanani, Balagopal Unnikrishnan, Syed Ali Khurram, Pavitra Krishnaswamy, Nasir M. Rajpoot
2020 J jnl
IEEE Trans. Medical Imaging
Neeraj Kumar, Ruchika Verma, Deepak Anand, Yanning Zhou, Omer Fahri Onder, Efstratios Tsougenis, Hao Chen, Pheng-Ann Heng, Jiahui Li, Zhiqiang Hu, Yunzhi Wang, Navid Alemi Koohbanani, Mostafa Jahanifar, Neda Zamani Tajeddin, Ali Gooya, Nasir M. Rajpoot, Xuhua Ren, Sihang Zhou, Qian Wang, Dinggang Shen, Cheng-Kun Yang, Chi-Hung Weng, Wei-Hsiang Yu, Chao-Yuan Yeh, Shuang Yang, Shuoyu Xu, Pak-Hei Yeung, Peng Sun, Amirreza Mahbod, Gerald Schaefer, Isabella Ellinger, Rupert Ecker, Örjan Smedby, Chunliang Wang, Benjamin Chidester, That-Vinh Ton, Minh-Triet Tran, Jian Ma, Minh N. Do, Simon Graham, Quoc Dang Vu, Jin Tae Kwak, Akshaykumar Gunda, Raviteja Chunduri, Corey Hu, Xiaoyang Zhou, Dariush Lotfi, Reza Safdari, Antanas Kascenas, Alison O'Neil, Dennis Eschweiler, Johannes Stegmaier, Yanping Cui, Baocai Yin, Kailin Chen, Xinmei Tian, Philipp Grüning, Erhardt Barth, Elad Arbel, Itay Remer, Amir Ben-Dor, Ekaterina Sirazitdinova, Matthias Kohl, Stefan Braunewell, Yuexiang Li, Xinpeng Xie, Linlin Shen, Jun Ma, Krishanu Das Baksi, Mohammad Azam Khan, Jaegul Choo, Adrián Colomer, Valery Naranjo, Linmin Pei, Khan M. Iftekharuddin, Kaushiki Roy, Debotosh Bhattacharjee, Aníbal Pedraza, Maria Gloria Bueno, Sabarinathan Devanathan, Saravanan Radhakrishnan, Praveen Koduganty, Zihan Wu, Guanyu Cai, Xiaojie Liu, Yuqin Wang, Amit Sethi
2020 J jnl
Medical Image Anal.
Sajid Javed, Arif Mahmood, Muhammad Moazam Fraz, Navid Alemi Koohbanani, Ksenija Benes, Yee-Wah Tsang, Katherine Hewitt, David B. A. Epstein, David R. J. Snead, Nasir M. Rajpoot
2020 J jnl
CoRR
Jevgenij Gamper, Navid Alemi Koohbanani, Nasir M. Rajpoot
2020 J jnl
CoRR
Navid Alemi Koohbanani, Mostafa Jahanifar, Neda Zamani Tajadin, Nasir M. Rajpoot
2020 J jnl
Medical Image Anal.
Navid Alemi Koohbanani, Mostafa Jahanifar, Neda Zamani Tajadin, Nasir M. Rajpoot
2020 J jnl
CoRR
Jevgenij Gamper, Navid Alemi Koohbanani, Simon Graham, Mostafa Jahanifar, Syed Ali Khurram, Ayesha Azam, Katherine Hewitt, Nasir M. Rajpoot
2020 J jnl
CoRR
Navid Alemi Koohbanani, Balagopal Unnikrishnan, Syed Ali Khurram, Pavitra Krishnaswamy, Nasir M. Rajpoot
2020
Navid Alemi Koohbanani
2019 conf
ICCV Workshops
Yanning Zhou, Simon Graham, Navid Alemi Koohbanani, Muhammad Shaban, Pheng-Ann Heng, Nasir M. Rajpoot
2019 J jnl
CoRR
Yanning Zhou, Simon Graham, Navid Alemi Koohbanani, Muhammad Shaban, Pheng-Ann Heng, Nasir M. Rajpoot
2019 J jnl
CoRR
Mostafa Jahanifar, Navid Alemi Koohbanani, Nasir M. Rajpoot
2019 conf
MICCAI (1)
Navid Alemi Koohbanani, Mostafa Jahanifar, Ali Gooya, Nasir M. Rajpoot
2019 conf
ECDP
Jevgenij Gamper, Navid Alemi Koohbanani, Ksenija Benet, Ali Khuram, Nasir M. Rajpoot
2018 conf
ICIAR
Ruqayya Awan, Navid Alemi Koohbanani, Muhammad Shaban, Anna Lisowska, Nasir M. Rajpoot
2018 J jnl
CoRR
Ruqayya Awan, Navid Alemi Koohbanani, Muhammad Shaban, Anna Lisowska, Nasir M. Rajpoot
2018 J jnl
CoRR
Navid Alemi Koohbanani, Mostafa Jahanifar, Neda Zamani Tajeddin, Ali Gooya, Nasir M. Rajpoot
2018 J jnl
CoRR
Quoc Dang Vu, Simon Graham, Minh Nguyen Nhat To, Muhammad Shaban, Talha Qaiser, Navid Alemi Koohbanani, Syed Ali Khurram, Tahsin M. Kurç, Keyvan Farahani, Tianhao Zhao, Rajarsi R. Gupta, Jin Tae Kwak, Nasir M. Rajpoot, Joel H. Saltz
2018 conf
MLMI@MICCAI
Navid Alemi Koohbanani, Mostafa Jahanifar, Ali Gooya, Nasir M. Rajpoot
2018 J jnl
CoRR
Navid Alemi Koohbanani, Mostafa Jahanifar, Ali Gooya, Nasir M. Rajpoot
2018 conf
COMPAY/OMIA@MICCAI
Navid Alemi Koohbanani, Talha Qaiser, Muhammad Shaban, Jevgenij Gamper, Nasir M. Rajpoot
tests/unit/test_smali_normalization.py
← Index tests/unit/test_smali_normalization.py python
"""Unit tests for smali semantic normalization.

Tests the three normalization levels (category, opcode, opcode_api),
opcode categorization, ACFG feature index mapping, and integration
with MinHash computation.
"""
import pytest

pytestmark = [pytest.mark.unit, pytest.mark.apk, pytest.mark.decompile]


class TestCategorizeOpcode:
    """Tests for opcode -> semantic category mapping."""

    def test_arithmetic(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("add-int") == "ALU"
        assert categorize_opcode("mul-long/2addr") == "ALU"
        assert categorize_opcode("neg-int") == "ALU"

    def test_data_movement(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("move-result") == "MOV"
        assert categorize_opcode("const/4") == "CONST"
        assert categorize_opcode("const-string") == "CONST"

    def test_memory_access(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("iget-object") == "LOAD"
        assert categorize_opcode("sput-wide") == "STORE"
        assert categorize_opcode("aget-byte") == "LOAD"

    def test_invocation(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("invoke-virtual") == "CALL"
        assert categorize_opcode("invoke-static") == "CALL"
        assert categorize_opcode("invoke-direct") == "CALL"

    def test_control_flow(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("if-eqz") == "BRANCH"
        assert categorize_opcode("goto") == "JMP"
        assert categorize_opcode("goto/16") == "JMP"
        assert categorize_opcode("return-void") == "RET"

    def test_comparison(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("cmp-long") == "CMP"
        assert categorize_opcode("cmpl-float") == "CMP"
        assert categorize_opcode("cmpg-double") == "CMP"

    def test_conversion(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("int-to-long") == "CONV"
        assert categorize_opcode("float-to-int") == "CONV"

    def test_object_type(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("new-instance") == "ALLOC"
        assert categorize_opcode("check-cast") == "TYPE"
        assert categorize_opcode("instance-of") == "TYPE"

    def test_exception_sync(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("throw") == "EXC"
        assert categorize_opcode("monitor-enter") == "SYNC"

    def test_unknown(self):
        from redb.extractors.decompiler.apk.smali_normalization import categorize_opcode
        assert categorize_opcode("nop") == "OTHER"


class TestNormalizeInstruction:
    """Tests for single instruction normalization at various levels."""

    def test_category_level(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        assert normalize_instruction("add-int v0, v1, v2", "category") == "ALU"
        assert normalize_instruction("invoke-virtual {p0}, Lcom/Foo;->bar()V", "category") == "CALL"
        assert normalize_instruction("return-void", "category") == "RET"

    def test_opcode_level_strips_width(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        # Width variants collapse to same base
        assert normalize_instruction("add-int v0, v1, v2", "opcode") == "add"
        assert normalize_instruction("add-long v0, v2, v4", "opcode") == "add"
        assert normalize_instruction("add-float v0, v1, v2", "opcode") == "add"
        # Addressing modes collapse too
        assert normalize_instruction("add-int/2addr v0, v1", "opcode") == "add"

    def test_opcode_api_invoke(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            "invoke-virtual {p0, v0}, Lcom/example/Foo;->bar(I)V"
        )
        assert result == "CALL Lcom/example/Foo;->bar(I)V"

    def test_opcode_api_invoke_no_ref(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        # If somehow no method ref is found, fallback to CALL
        assert normalize_instruction("invoke-virtual {v0}") == "CALL"

    def test_opcode_api_field_load(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            "iget-object v0, p0, Lcom/Foo;->mField:Ljava/lang/String;"
        )
        assert result == "LOAD Lcom/Foo;->mField:Ljava/lang/String;"

    def test_opcode_api_field_store(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            "iput-object v0, p0, Lcom/Foo;->mField:Ljava/lang/String;"
        )
        assert result == "STORE Lcom/Foo;->mField:Ljava/lang/String;"

    def test_opcode_api_androguard_field_format(self):
        """androguard uses space instead of colon in field references."""
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            "iget-object v0, p0, Lcom/Foo;->mField Ljava/lang/String;"
        )
        assert result.startswith("LOAD")
        assert "Lcom/Foo;->mField" in result

    def test_opcode_api_new_instance(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            "new-instance v0, Lcom/example/MyClass;"
        )
        assert result == "ALLOC Lcom/example/MyClass;"

    def test_opcode_api_const_string(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            'const-string v0, "hello world"'
        )
        assert result == 'CONST_STR "hello world"'

    def test_opcode_api_const_string_jumbo(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        result = normalize_instruction(
            'const-string/jumbo v0, "large string"'
        )
        assert result == 'CONST_STR "large string"'

    def test_opcode_api_fallback_to_category(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        # Non-special instructions fall back to category
        assert normalize_instruction("add-int v0, v1, v2") == "ALU"
        assert normalize_instruction("return-void") == "RET"
        assert normalize_instruction("nop") == "OTHER"

    def test_empty_input(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_instruction
        assert normalize_instruction("") == ""
        assert normalize_instruction("   ") == ""


class TestNormalizeMethodBody:
    """Tests for full method body normalization."""

    def test_filters_directives_labels_comments(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_method_body
        body = """\
.locals 2
# comment
:label_0
add-int v0, v1, v2
.line 42
invoke-virtual {p0}, Lcom/Foo;->bar()V
return-void
"""
        result = normalize_method_body(body, "category")
        assert result == ["ALU", "CALL", "RET"]

    def test_opcode_api_preserves_api_refs(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_method_body
        body = """\
const/4 v0, 0x0
invoke-virtual {p0, v0}, Lcom/Foo;->setX(I)V
iget-object v1, p0, Lcom/Foo;->name:Ljava/lang/String;
return-void
"""
        result = normalize_method_body(body, "opcode_api")
        assert result[0] == "CONST"
        assert result[1] == "CALL Lcom/Foo;->setX(I)V"
        assert result[2] == "LOAD Lcom/Foo;->name:Ljava/lang/String;"
        assert result[3] == "RET"

    def test_empty_body(self):
        from redb.extractors.decompiler.apk.smali_normalization import normalize_method_body
        assert normalize_method_body("") == []
        assert normalize_method_body("\n\n") == []


class TestNormalizationWithMinHash:
    """Integration tests: normalization + MinHash computation."""

    def test_minhash_returns_signature(self):
        from redb.extractors.decompiler.apk.method_extractor import compute_minhash
        body = """\
const/4 v0, 0x0
invoke-virtual {p0, v0}, Lcom/Foo;->bar(I)V
iget-object v1, p0, Lcom/Foo;->name:Ljava/lang/String;
add-int v2, v0, v1
return-void
"""
        sig = compute_minhash(body)
        assert sig is not None
        assert len(sig) == 64
        assert all(0 <= v < 256 for v in sig)

    def test_minhash_register_invariance(self):
        """Same operations with different registers should produce identical signatures."""
        from redb.extractors.decompiler.apk.method_extractor import compute_minhash
        body_a = """\
const/4 v0, 0x0
invoke-virtual {p0, v0}, Lcom/Foo;->bar(I)V
iget-object v1, p0, Lcom/Foo;->name:Ljava/lang/String;
add-int v2, v0, v1
return-void
"""
        body_b = """\
const/4 v3, 0x0
invoke-virtual {p1, v3}, Lcom/Foo;->bar(I)V
iget-object v4, p1, Lcom/Foo;->name:Ljava/lang/String;
add-int v5, v3, v4
return-void
"""
        sig_a = compute_minhash(body_a)
        sig_b = compute_minhash(body_b)
        assert sig_a == sig_b

    def test_minhash_width_invariance(self):
        """Width variants of same operations should produce identical signatures."""
        from redb.extractors.decompiler.apk.method_extractor import compute_minhash
        body_int = """\
add-int v0, v1, v2
sub-int v3, v0, v1
mul-int v4, v0, v3
return v4
"""
        body_long = """\
add-long v0, v2, v4
sub-long v6, v0, v2
mul-long v8, v0, v6
return-wide v8
"""
        sig_int = compute_minhash(body_int)
        sig_long = compute_minhash(body_long)
        # Both normalize to ALU, ALU, ALU, RET -> identical
        assert sig_int == sig_long

    def test_minhash_different_apis_differ(self):
        """Methods calling different APIs should produce different signatures."""
        from redb.extractors.decompiler.apk.method_extractor import compute_minhash
        body_a = """\
const/4 v0, 0x0
invoke-virtual {p0, v0}, Lcom/crypto/AES;->encrypt([B)[B
invoke-virtual {v0}, Ljava/io/OutputStream;->write([B)V
return-void
"""
        body_b = """\
const/4 v0, 0x0
invoke-virtual {p0, v0}, Ljava/lang/String;->length()I
invoke-virtual {v0}, Ljava/io/PrintStream;->println(I)V
return-void
"""
        sig_a = compute_minhash(body_a)
        sig_b = compute_minhash(body_b)
        assert sig_a != sig_b

    def test_minhash_too_few_instructions(self):
        from redb.extractors.decompiler.apk.method_extractor import compute_minhash
        assert compute_minhash("return-void\nnop") is None


class TestACFGBlockFeatures:
    """Tests for per-block ACFG feature extraction via smali_cfg."""

    def test_simple_linear_method(self):
        from redb.extractors.decompiler.apk.smali_cfg import compute_cfg_metrics
        body = """\
add-int v0, v1, v2
invoke-virtual {p0}, Lcom/Foo;->bar()V
return-void
"""
        metrics = compute_cfg_metrics(body)
        assert metrics.block_count >= 1
        assert len(metrics.block_features) == metrics.block_count
        # Each feature vector has 8 elements
        for feat in metrics.block_features:
            assert len(feat) == 8

    def test_branching_method_has_multiple_blocks(self):
        from redb.extractors.decompiler.apk.smali_cfg import compute_cfg_metrics
        body = """\
const/4 v0, 0x0
if-eqz v0, :cond_0
invoke-virtual {p0}, Lcom/Foo;->a()V
goto :goto_0
:cond_0
invoke-virtual {p0}, Lcom/Foo;->b()V
:goto_0
return-void
"""
        metrics = compute_cfg_metrics(body)
        assert metrics.block_count >= 3
        assert len(metrics.block_features) == metrics.block_count

    def test_feature_vector_arithmetic_count(self):
        from redb.extractors.decompiler.apk.smali_cfg import compute_cfg_metrics
        body = """\
add-int v0, v1, v2
sub-int v3, v0, v1
mul-int v4, v0, v3
return v4
"""
        metrics = compute_cfg_metrics(body)
        assert len(metrics.block_features) == 1
        feat = metrics.block_features[0]
        # feat[0] = instr_count (4), feat[1] = arithmetic (3)
        assert feat[0] == 4
        assert feat[1] >= 3  # 3 ALU ops

    def test_feature_vector_call_count(self):
        from redb.extractors.decompiler.apk.smali_cfg import compute_cfg_metrics
        body = """\
invoke-virtual {p0}, Lcom/A;->a()V
invoke-static {v0}, Lcom/B;->b()V
return-void
"""
        metrics = compute_cfg_metrics(body)
        feat = metrics.block_features[0]
        # feat[4] = call count
        assert feat[4] == 2