Nathaniel K. Brown

17 papers B 5C 2Journal 9Unranked 1

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Bounding the Average Move Structure Query for Faster and Smaller RLBWT Permutations. CoRR Nathaniel K. Brown, Ben Langmead
2026	J	`jnl`	Col-BWT: Pangenomic Seed Chaining with Maximal Matches Improves Read Classification. J. Comput. Biol. Nathaniel K. Brown, Vikram Shivakumar, Ben Langmead
2026	J	`jnl`	Optimal-Time Move Structure Balancing and LCP Array Computation from the RLBWT. CoRR Nathaniel K. Brown, Ahsan Sanaullah, Shaojie Zhang, Ben Langmead
2025	—	`conf`	Faster Run-Length Compressed Suffix Arrays. From Strings to Graphs, and Back Again Nathaniel K. Brown, Travis Gagie, Giovanni Manzini, Gonzalo Navarro, Marinella Sciortino
2025	B	`conf`	Improved Pangenomic Classification Accuracy with Chain Statistics. RECOMB Nathaniel K. Brown, Vikram Shivakumar, Ben Langmead
2025	J	`jnl`	KeBaB: CoRR Nathaniel K. Brown, Anas Alhadi, Nour Allam, Dove Begleiter, Nithin Bharathi Kabilan Karpagavalli, Suchith Sridhar Khajjayam, Hamza Wahed, Travis Gagie
2025	C	`conf`	KeBaB: k-mer Based Breaking for Finding Long MEMs. SPIRE Nathaniel K. Brown, Lore Depuydt, Mohsen Zakeri, Anas Alhadi, Nour Allam, Dove Begleiter, Nithin Bharathi Kabilan Karpagavalli, Suchith Sridhar Khajjayam, Hamza Wahed, Travis Gagie, Ben Langmead
2025	J	`jnl`	Mem-based pangenome indexing for k-mer queries. Algorithms Mol. Biol. Stephen Hwang, Nathaniel K. Brown, Omar Y. Ahmed, Katharine M. Jenike, Sam Kovaka, Michael C. Schatz, Ben Langmead
2024	B	`conf`	Faster Maximal Exact Matches with Lazy LCP Evaluation. DCC Adrián Goga, Lore Depuydt, Nathaniel K. Brown, Jan Fostier, Travis Gagie, Gonzalo Navarro
2024	C	`conf`	MEM-Based Pangenome Indexing for k-mer Queries. WABI Stephen Hwang, Nathaniel K. Brown, Omar Y. Ahmed, Katharine M. Jenike, Sam Kovaka, Michael C. Schatz, Ben Langmead
2024	J	`jnl`	MIOV: Reordering MOVI for even better locality. CoRR Peter Peresíni, Nathaniel K. Brown, Travis Gagie, Ben Langmead
2023	B	`conf`	Augmented Thresholds for MONI. DCC César Martínez-Guardiola, Nathaniel K. Brown, Fernando Silva-Coira, Dominik Köppl, Travis Gagie, Susana Ladra
2023	J	`jnl`	Faster Maximal Exact Matches with Lazy LCP Evaluation. CoRR Adrián Goga, Lore Depuydt, Nathaniel K. Brown, Jan Fostier, Travis Gagie, Gonzalo Navarro
2022	J	`jnl`	Augmented Thresholds for MONI. CoRR César Martínez-Guardiola, Nathaniel K. Brown, Fernando Silva-Coira, Dominik Köppl, Travis Gagie, Susana Ladra
2022	B	`conf`	RLBWT Tricks. DCC Nathaniel K. Brown, Travis Gagie, Massimiliano Rossi
2022	B	`conf`	RLBWT Tricks. SEA Nathaniel K. Brown, Travis Gagie, Massimiliano Rossi
2021	J	`jnl`	RLBWT Tricks. CoRR Nathaniel K. Brown, Travis Gagie, Massimiliano Rossi