Natalja Kurbatova

15 papers C 1Journal 12Unranked 2
YearRankTypeTitle / Venue / Authors
2024 J jnl
Good machine learning practices: Learnings from the modern pharmaceutical discovery enterprise.
Comput. Biol. Medicine
Vladimir Makarov, Christophe Chabbert, Elina Koletou, Fotis E. Psomopoulos, Natalja Kurbatova, Samuel A. Ramirez, Chas Nelson, Prashant Natarajan, Bikalpa Neupane
2024 J jnl
Open-Source Approach to GPU-Accelerated Substructure Search.
J. Chem. Inf. Model.
Andrew J. Whitehouse, Melchor Sanchez-Martinez, Seyedeh Maryam Salehi, Natalja Kurbatova, Euan Dean
2021 J jnl
Disease ontologies for knowledge graphs.
BMC Bioinform.
Natalja Kurbatova, Rowan Swiers
2015 J jnl
ArrayExpress update - simplifying data submissions.
Nucleic Acids Res.
Nikolay Kolesnikov, Emma Hastings, Maria Keays, Olga Melnichuk, Y. Amy Tang, Eleanor Williams, Miroslaw Dylag, Natalja Kurbatova, Marco Brandizi, Tony Burdett, Karyn Megy, Ekaterina Pilicheva, Gabriella Rustici, Andrew Tikhonov, Helen E. Parkinson, Robert Petryszak, Ugis Sarkans, Alvis Brazma
2014 J jnl
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data.
Nucleic Acids Res.
Gautier Koscielny, Gagarine Yaikhom, Vivek Iyer, Terrence F. Meehan, Hugh Morgan, Julian Atienza-Herrero, Andrew Blake, Chao-Kung Chen, Richard Easty, Armida Di Fenza, Tanja Fiegel, Mark Grifiths, Alan Horne, Natasha A. Karp, Natalja Kurbatova, Jeremy C. Mason, Peter Matthews, Darren J. Oakley, Asfand Qazi, Jack Regnart, Ahmad Retha, Luis A. Santos, Duncan J. Sneddon, Jonathan Warren, Henrik Westerberg, Robert J. Wilson, David G. Melvin, Damian Smedley, Steve D. M. Brown, Paul Flicek, William C. Skarnes, Ann-Marie Mallon, Helen E. Parkinson
2013 J jnl
ArrayExpress update - trends in database growth and links to data analysis tools.
Nucleic Acids Res.
Gabriella Rustici, Nikolay Kolesnikov, Marco Brandizi, Tony Burdett, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Emma Hastings, Jon C. Ison, Maria Keays, Natalja Kurbatova, James Malone, Roby Mani, Annalisa Mupo, Rui Pedro Pereira, Ekaterina Pilicheva, Johan Rung, Anjan Sharma, Y. Amy Tang, Tobias Ternent, Andrew Tikhonov, Danielle Welter, Eleanor Williams, Alvis Brazma, Helen E. Parkinson, Ugis Sarkans
2012 J jnl
Gene Expression Atlas update - a value-added database of microarray and sequencing-based functional genomics experiments.
Nucleic Acids Res.
Misha Kapushesky, Tomasz Adamusiak, Tony Burdett, Aedín C. Culhane, Anna Farne, Alexey Filippov, Ele Holloway, Andrey Klebanov, Nataliya Kryvych, Natalja Kurbatova, Pavel Kurnosov, James Malone, Olga Melnichuk, Robert Petryszak, Nikolay Pultsin, Gabriella Rustici, Andrew Tikhonov, Ravensara S. Travillian, Eleanor Williams, Andrey Zorin, Helen E. Parkinson, Alvis Brazma
2012 J jnl
graph2tab, a library to convert experimental workflow graphs into tabular formats.
Bioinform.
Marco Brandizi, Natalja Kurbatova, Ugis Sarkans, Philippe Rocca-Serra
2011 J jnl
ArrayExpress update - an archive of microarray and high-throughput sequencing-based functional genomics experiments.
Nucleic Acids Res.
Helen E. Parkinson, Ugis Sarkans, Nikolay Kolesnikov, Niran Abeygunawardena, Tony Burdett, Miroslaw Dylag, Ibrahim Emam, Anna Farne, Emma Hastings, Ele Holloway, Natalja Kurbatova, Margus Lukk, James Malone, Roby Mani, Ekaterina Pilicheva, Gabriella Rustici, Anjan Sharma, Eleanor Williams, Tomasz Adamusiak, Marco Brandizi, Nataliya Sklyar, Alvis Brazma
2011 J jnl
OntoCAT - simple ontology search and integration in Java, R and REST/JavaScript.
BMC Bioinform.
Tomasz Adamusiak, Tony Burdett, Natalja Kurbatova, K. Joeri van der Velde, Niran Abeygunawardena, Despoina Antonakaki, Misha Kapushesky, Helen E. Parkinson, Morris A. Swertz
2011 J jnl
ontoCAT: an R package for ontology traversal and search.
Bioinform.
Natalja Kurbatova, Tomasz Adamusiak, Pavel Kurnosov, Morris A. Swertz, Misha Kapushesky
2009 J jnl
A System for Information Management in BioMedical Studies - SIMBioMS.
Bioinform.
Maria Krestyaninova, Andris Zarins, Juris Viksna, Natalja Kurbatova, Peteris Rucevskis, Sudeshna Guha Neogi, Mike Gostev, Teemu Perheentupa, Juha Knuuttila, Amy Barrett, Ilkka Lappalainen, Johan Rung, Karlis Podnieks, Ugis Sarkans, Mark I. McCarthy, Alvis Brazma
2008 C conf
Detection of 3D atomic similarities and their use in the discrimination of small molecule protein-binding sites.
ECCB
Rafael Najmanovich, Natalja Kurbatova, Janet M. Thornton
2008 — conf
Exploration of Evolutionary Relations between Protein Structures.
BIRD
Natalja Kurbatova, Juris Viksna
2007 — conf
Protein Structure Comparison Based on Fold Evolution.
German Conference on Bioinformatics
Natalja Kurbatova, Laura Mancinska, Juris Viksna