Natalia Viani

19 papers B 5Misc 2Journal 4Unranked 8
YearRankTypeTitle / Venue / Authors
2020 conf
MIE
Sonia Priou, Natalia Viani, Veshalee Vernugopan, Chloe Tytherleigh, Faduma Abdalla Hassan, Rina Dutta, Trudie Chalder, Sumithra Velupillai
2020 B conf
LREC
Jaya Chaturvedi, Natalia Viani, Jyoti Sanyal, Chloe Tytherleigh, Idil Hasan, Kate Baird, Sumithra Velupillai, Robert Stewart, Angus Roberts
2020 J jnl
npj Digit. Medicine
Julia Ive, Natalia Viani, Joyce Kam, Lucia Yin, Somain Verma, Stephen Puntis, Rudolf N. Cardinal, Angus Roberts, Robert Stewart, Sumithra Velupillai
2020 J jnl
J. Biomed. Semant.
Natalia Viani, Joyce Kam, Lucia Yin, André Bittar, Rina Dutta, Rashmi Patel, Robert Stewart, Sumithra Velupillai
2019 conf
BioNLP@ACL
Natalia Viani, Hegler Tissot, Ariane Bernardino, Sumithra Velupillai
2019 conf
MedInfo
Natalia Viani, Joyce Kam, Lucia Yin, Somain Verma, Robert Stewart, Rashmi Patel, Sumithra Velupillai
2019 B conf
AIME
Natalia Viani, Rashmi Patel, Robert Stewart, Sumithra Velupillai
2019 conf
MedInfo
Lorenzo Chiudinelli, Matteo Gabetta, G. Centorrino, Natalia Viani, Cristina Tasca, Alberto Zambelli, Mauro Bucalo, Arianna Ghirardi, Nicola Barbarini, Eleonora Sfreddo, Carlo Tondini, Riccardo Bellazzi, Lucia Sacchi
2019 J jnl
J. Biomed. Informatics
Natalia Viani, Timothy A. Miller, Carlo Napolitano, Silvia G. Priori, Guergana K. Savova, Riccardo Bellazzi, Lucia Sacchi
2019 Misc conf
AMIA
Natalia Viani, Hegler Tissot, Ariane Bernardino, Sumithra Velupillai
2018 conf
MIE
Natalia Viani, Lorenzo Chiudinelli, Cristina Tasca, Alberto Zambelli, Mauro Bucalo, Arianna Ghirardi, Nicola Barbarini, Eleonora Sfreddo, Lucia Sacchi, Carlo Tondini, Riccardo Bellazzi
2018 J jnl
Int. J. Medical Informatics
Natalia Viani, Cristiana Larizza, Valentina Tibollo, Carlo Napolitano, Silvia G. Priori, Riccardo Bellazzi, Lucia Sacchi
2018 conf
CLEF (Working Notes)
Julia Ive, Natalia Viani, David Chandran, André Bittar, Sumithra Velupillai
2018 conf
Louhi@EMNLP
Natalia Viani, Lucia Yin, Joyce Kam, Ayunni Alawi, André Bittar, Rina Dutta, Rashmi Patel, Robert Stewart, Sumithra Velupillai
2017 conf
RTSI
Natalia Viani, Lucia Sacchi, Valentina Tibollo, Carlo Napolitano, Silvia G. Priori, Riccardo Bellazzi
2017 B conf
AIME
Elisa Salvi, Enea Parimbelli, Alessia Basadonne, Natalia Viani, Anna Cavallini, Giuseppe Micieli, Silvana Quaglini, Lucia Sacchi
2017 B conf
AIME
Natalia Viani, Timothy A. Miller, Dmitriy Dligach, Steven Bethard, Carlo Napolitano, Silvia G. Priori, Riccardo Bellazzi, Lucia Sacchi, Guergana K. Savova
2016 Misc conf
AMIA
Natalia Viani, Valentina Tibollo, Carlo Napolitano, Silvia G. Priori, Riccardo Bellazzi, Cristiana Larizza, Lucia Sacchi
2015 B conf
AIME
Lucia Sacchi, Enea Parimbelli, Silvia Panzarasa, Natalia Viani, Elena Rizzo, Carlo Napolitano, Roxana Ioana Budasu, Silvana Quaglini
redb/extractors/js_extractors/js_patterns.py
← Index redb/extractors/js_extractors/js_patterns.py python
"""Canonical, compiled JavaScript regex patterns shared across JS extractors.

All suspicious-API patterns and the few feature-only patterns live here so each
expression is compiled exactly once per Python process and so any pattern that
was previously duplicated across `js_features.py` and `js_suspicious_apis.py`
now resolves to a single shared compiled object.

JavaScript is case-sensitive at runtime, but every suspicious-API pattern matches
either a literal-case identifier (`\\beval\\s*\\(`, `String\\.fromCharCode`, etc.)
or a string-quoted token (`"powershell"`). Compiling them with `re.IGNORECASE`
matches the historical behaviour of `JSSuspiciousAPIsExtractor` and is safe for
the patterns that historically came from `JSFeaturesExtractor` — those literals
are spelled in real-world JS exactly as written.

`scan_source()` is the entry point used by extractors: it walks the source once
per pattern using the pre-compiled regexes and returns a flat
`{name: {"count": N, "lines": [unique_line_numbers_sorted]}}` dict. Both
`JSFeaturesExtractor` and `JSSuspiciousAPIsExtractor` consume the same dict so
the per-pattern × per-line loops they used to run independently collapse to a
single shared scan.
"""

import bisect
import re
from typing import Dict, Iterable, List, Mapping

_FLAGS = re.IGNORECASE

# Canonical compiled patterns, keyed by their human-readable name. The name is
# also the value emitted into `redb_js_suspicious_apis.api_name`.
PATTERNS = {
    # ---- code execution ----
    "eval": re.compile(r"\beval\s*\(", _FLAGS),
    "Function constructor": re.compile(r"\bnew\s+Function\s*\(", _FLAGS),
    "execScript": re.compile(r"\bexecScript\s*\(", _FLAGS),
    "document.write": re.compile(r"\bdocument\.write(?:ln)?\s*\(", _FLAGS),
    "innerHTML assignment": re.compile(r"\.innerHTML\s*=", _FLAGS),
    "outerHTML assignment": re.compile(r"\.outerHTML\s*=", _FLAGS),
    "insertAdjacentHTML": re.compile(r"\.insertAdjacentHTML\s*\(", _FLAGS),
    # ---- network ----
    "XMLHttpRequest": re.compile(r"\bnew\s+XMLHttpRequest\b", _FLAGS),
    "fetch": re.compile(r"\bfetch\s*\(", _FLAGS),
    "WebSocket": re.compile(r"\bnew\s+WebSocket\s*\(", _FLAGS),
    "navigator.sendBeacon": re.compile(r"\bnavigator\.sendBeacon\s*\(", _FLAGS),
    "ActiveXObject XMLHTTP": re.compile(
        r"ActiveXObject\s*\(\s*[\"\'](?:MSXML2\.XMLHTTP|Microsoft\.XMLHTTP)", _FLAGS
    ),
    "require network module": re.compile(
        r"require\s*\(\s*[\"\'](?:http|https|net|dgram)[\"\']", _FLAGS
    ),
    "axios": re.compile(r"\baxios\b", _FLAGS),
    # ---- filesystem ----
    "require fs": re.compile(r"require\s*\(\s*[\"\']fs[\"\']", _FLAGS),
    "require path": re.compile(r"require\s*\(\s*[\"\']path[\"\']", _FLAGS),
    "FileSystemObject": re.compile(r"Scripting\.FileSystemObject", _FLAGS),
    "ADODB.Stream": re.compile(r"ADODB\.Stream", _FLAGS),
    "Shell.Application": re.compile(r"Shell\.Application", _FLAGS),
    "WScript.CreateObject": re.compile(r"WScript\.CreateObject", _FLAGS),
    # ---- process ----
    "require child_process": re.compile(r"require\s*\(\s*[\"\']child_process[\"\']", _FLAGS),
    "child_process exec": re.compile(r"child_process\.(?:exec|spawn|execFile|fork)\s*\(", _FLAGS),
    "WScript.Shell": re.compile(r"WScript\.Shell", _FLAGS),
    "WScript.Shell.Run": re.compile(r"\.Run\s*\(", _FLAGS),
    "WScript.Shell.Exec": re.compile(r"\.Exec\s*\(", _FLAGS),
    "ShellExecute": re.compile(r"\bShellExecute\b", _FLAGS),
    "PowerShell reference": re.compile(r"[\"\']powershell[\"\']", _FLAGS),
    "cmd.exe reference": re.compile(r"[\"\']cmd\.exe[\"\']", _FLAGS),
    "require os": re.compile(r"require\s*\(\s*[\"\']os[\"\']", _FLAGS),
    # ---- registry ----
    "RegRead": re.compile(r"\.RegRead\s*\(", _FLAGS),
    "RegWrite": re.compile(r"\.RegWrite\s*\(", _FLAGS),
    "RegDelete": re.compile(r"\.RegDelete\s*\(", _FLAGS),
    "StdRegProv": re.compile(r"StdRegProv", _FLAGS),
    # ---- crypto / encoding ----
    "atob": re.compile(r"\batob\s*\(", _FLAGS),
    "btoa": re.compile(r"\bbtoa\s*\(", _FLAGS),
    "String.fromCharCode": re.compile(r"String\.fromCharCode\s*\(", _FLAGS),
    "unescape": re.compile(r"\bunescape\s*\(", _FLAGS),
    "decodeURIComponent": re.compile(r"\bdecodeURIComponent\s*\(", _FLAGS),
    "Buffer.from": re.compile(r"Buffer\.from\s*\(", _FLAGS),
    "crypto module": re.compile(r"crypto\.create(?:Cipher|Decipher|Hash|Hmac)", _FLAGS),
    # ---- DOM manipulation ----
    "document.forms": re.compile(r"document\.forms", _FLAGS),
    "document.cookie": re.compile(r"document\.cookie", _FLAGS),
    "querySelector sensitive input": re.compile(
        r"document\.querySelector\s*\([^)]*(?:password|credit|card|cvv|ssn)", _FLAGS
    ),
    "submit event listener": re.compile(r"addEventListener\s*\(\s*[\"\']submit", _FLAGS),
    "createElement script/iframe": re.compile(
        r"\.createElement\s*\(\s*[\"\'](?:script|iframe)", _FLAGS
    ),
    "dynamic script src": re.compile(r"\.src\s*=\s*[\"\'](?:https?://|//)", _FLAGS),
}

# Pattern name -> category (one of code_execution / network / filesystem /
# process / registry / crypto_encoding / dom_manipulation).
CATEGORIES = {
    "eval": "code_execution",
    "Function constructor": "code_execution",
    "execScript": "code_execution",
    "document.write": "code_execution",
    "innerHTML assignment": "code_execution",
    "outerHTML assignment": "code_execution",
    "insertAdjacentHTML": "code_execution",
    "XMLHttpRequest": "network",
    "fetch": "network",
    "WebSocket": "network",
    "navigator.sendBeacon": "network",
    "ActiveXObject XMLHTTP": "network",
    "require network module": "network",
    "axios": "network",
    "require fs": "filesystem",
    "require path": "filesystem",
    "FileSystemObject": "filesystem",
    "ADODB.Stream": "filesystem",
    "Shell.Application": "filesystem",
    "WScript.CreateObject": "filesystem",
    "require child_process": "process",
    "child_process exec": "process",
    "WScript.Shell": "process",
    "WScript.Shell.Run": "process",
    "WScript.Shell.Exec": "process",
    "ShellExecute": "process",
    "PowerShell reference": "process",
    "cmd.exe reference": "process",
    "require os": "process",
    "RegRead": "registry",
    "RegWrite": "registry",
    "RegDelete": "registry",
    "StdRegProv": "registry",
    "atob": "crypto_encoding",
    "btoa": "crypto_encoding",
    "String.fromCharCode": "crypto_encoding",
    "unescape": "crypto_encoding",
    "decodeURIComponent": "crypto_encoding",
    "Buffer.from": "crypto_encoding",
    "crypto module": "crypto_encoding",
    "document.forms": "dom_manipulation",
    "document.cookie": "dom_manipulation",
    "querySelector sensitive input": "dom_manipulation",
    "submit event listener": "dom_manipulation",
    "createElement script/iframe": "dom_manipulation",
    "dynamic script src": "dom_manipulation",
}

# Patterns consumed only by JSFeaturesExtractor (no category, never surfaced as
# a suspicious-API row). Kept here so every JS regex is compiled in one place.
FEATURE_PATTERNS = {
    "hex_escape": re.compile(r"\\x[0-9a-fA-F]{2}"),
    "unicode_escape": re.compile(r"\\u[0-9a-fA-F]{4}"),
    "base64_string": re.compile(r"[A-Za-z0-9+/]{40,}={0,2}"),
    # decodeURI matches BOTH decodeURI and decodeURIComponent. The latter is also
    # a suspicious-API pattern in PATTERNS; this broader form is what the
    # `decodeuri_count` feature column has historically counted.
    "decodeURI": re.compile(r"\b(?:decodeURI|decodeURIComponent)\s*\(", _FLAGS),
    "settimeout_setinterval": re.compile(r"\b(?:setTimeout|setInterval)\s*\(", _FLAGS),
    "function_decl": re.compile(r"\bfunction\s+\w+\s*\(|\bfunction\s*\("),
    "var_decl": re.compile(r"\b(?:var|let|const)\s+"),
    "string_concat": re.compile(r"[\"\'][\s]*\+[\s]*[\"\']"),
    "comment": re.compile(r"//.*?$|/\*[\s\S]*?\*/", re.MULTILINE),
    "long_string": re.compile(r"[\"\']([^\"\']{256,})[\"\']"),
    "array_function_call": re.compile(r"\[(?:0x[0-9a-f]+|[\d]+)\]\s*\(", _FLAGS),
}

# Patterns consumed only by JSStringsExtractor for encoded-string discovery.
# Scoped to *hidden* strings only — patterns whose decoded form is not visible
# to a substring search over the raw text. Plain long literals are not
# extracted here because they're already preserved in code_text_content and
# scraped by the IOC pipeline over text_raw / text_normalized.
#
# Distinct from FEATURE_PATTERNS even where the names rhyme:
#   FEATURE_PATTERNS["hex_escape"] / ["unicode_escape"]   -> single escape
#   STRING_PATTERNS["hex_escape_seq"] / ["unicode_escape_seq"] -> 4+ / 3+ in a row
#   FEATURE_PATTERNS["base64_string"]                     -> bare base64 token
#   STRING_PATTERNS["base64_quoted"]                      -> base64 inside JS quotes
# These do not share match objects with the suspicious-API or feature scans, so
# they are not folded into JSContext.scan; the strings extractor walks them
# itself (one finditer per pattern, with shared line-offset bisect in #4b).
STRING_PATTERNS = {
    "hex_escape_seq": re.compile(r"(?:\\x[0-9a-fA-F]{2}){4,}"),
    "unicode_escape_seq": re.compile(r"(?:\\u[0-9a-fA-F]{4}){3,}"),
    "charcode_call": re.compile(r"String\.fromCharCode\s*\(\s*([\d,\s]+)\s*\)"),
    "base64_quoted": re.compile(r"[\"\']([A-Za-z0-9+/]{40,}={0,2})[\"\']"),
    "concat_chain": re.compile(r"(?:[\"\'][^\"\']+[\"\']\s*\+\s*){3,}[\"\'][^\"\']+[\"\']"),
}


def line_offsets(source: str) -> List[int]:
    """Sorted list of byte offsets for every newline in `source`, plus a final
    sentinel of len(source). Used to translate match offsets into 1-indexed
    line numbers via bisect.
    """
    offsets = [-1]  # so that bisect_right of offset 0 returns line 1
    push = offsets.append
    idx = source.find("\n")
    while idx != -1:
        push(idx)
        idx = source.find("\n", idx + 1)
    return offsets


def _scan_one(
    pattern: "re.Pattern[str]", source: str, offsets: List[int]
) -> Dict[str, object]:
    """Run a single compiled pattern over `source` and return count + unique lines."""
    count = 0
    seen_lines: "set[int]" = set()
    for m in pattern.finditer(source):
        count += 1
        seen_lines.add(bisect.bisect_right(offsets, m.start()))
    if not count:
        return None  # type: ignore[return-value]
    return {"count": count, "lines": sorted(seen_lines)}


def scan_source(
    source: str,
    patterns: Iterable[Mapping[str, "re.Pattern[str]"]] = (PATTERNS, FEATURE_PATTERNS),
) -> Dict[str, Dict[str, object]]:
    """Scan `source` against every compiled pattern in `patterns`.

    Returns a dict keyed by pattern name. Each entry has:
        "count": total number of matches in the source
        "lines": sorted list of unique 1-indexed line numbers where the pattern
                 matched (deduplicated — multiple matches on the same line
                 collapse to one entry, preserving the historical
                 line-set semantics of JSSuspiciousAPIsExtractor)
    Patterns with zero matches are absent from the dict; callers should default
    to {"count": 0, "lines": []}.
    """
    if not source:
        return {}
    offsets = line_offsets(source)
    results: Dict[str, Dict[str, object]] = {}
    for table in patterns:
        for name, pat in table.items():
            entry = _scan_one(pat, source, offsets)
            if entry is not None:
                results[name] = entry
    return results