Nansu Zong

45 papers Misc 6Journal 25Unranked 14
YearRankTypeTitle / Venue / Authors
2025 J jnl
Advancing efficacy prediction for electronic health records based emulated trials in repurposing heart failure therapies.
npj Digit. Medicine
Nansu Zong, Shaika Chowdhury, Shibo Zhou, Sivaraman Rajaganapathy, Yue Yu, Liewei Wang, Qiying Dai, Pengyang Li, Xiaoke Liu, Suzette J. Bielinski, Jun Chen, Yongbin Chen, James R. Cerhan
2025 J jnl
Enhancing Lung Cancer Treatment Outcome Prediction through Semantic Feature Engineering Using Large Language Models.
CoRR
MunHwan Lee, Shaika Chowdhury, Xiaodi Li, Sivaraman Rajaganapathy, Eric W. Klee, Ping Yang, Terence T. Sio, Liewei Wang, James R. Cerhan, Nansu Zong
2025 J jnl
LLM-Match: An Open-Sourced Patient Matching Model Based on Large Language Models and Retrieval-Augmented Generation.
CoRR
Xiaodi Li, Shaika Chowdhury, Chung-Il Wi, Maria Vassilaki, Xiaoke Liu, Terence T. Sio, Owen Garrick, Young J. Juhn, James R. Cerhan, Cui Tao, Nansu Zong
2025 J jnl
Launching Insights: A Pilot Study on Leveraging Real-World Observational Data from the Mayo Clinic Platform to Advance Clinical Research.
CoRR
Yue Yu, Xinyue Hu, Sivaraman Rajaganapathy, Jingna Feng, Ahmed Abdelhameed, Xiaodi Li, Jianfu Li, Ken Liu, Liu Yang, Nilufer Taner, Phil Fiero, Soulmaz Boroumand, Richard Larsen, Maneesh Goyal, Clark Otley, Nansu Zong, John Halamka, Cui Tao
2024 J jnl
A taxonomy for advancing systematic error analysis in multi-site electronic health record-based clinical concept extraction.
J. Am. Medical Informatics Assoc.
Sunyang Fu, Liwei Wang, Huan He, Andrew Wen, Nansu Zong, Anamika Kumari, Feifan Liu, Sicheng Zhou, Rui Zhang, Chenyu Li, Yanshan Wang, Jennifer St Sauver, Hongfang Liu, Sunghwan Sohn
2024 J jnl
Stratifying heart failure patients with graph neural network and transformer using Electronic Health Records to optimize drug response prediction.
J. Am. Medical Informatics Assoc.
Shaika Chowdhury, Yongbin Chen, Pengyang Li, Sivaraman Rajaganapathy, Andrew Wen, Xiao Ma, Qiying Dai, Yue Yu, Sunyang Fu, Xiaoqian Jiang, Zhe He, Sunghwan Sohn, Xiaoke Liu, Suzette J. Bielinski, Alanna M. Chamberlain, James R. Cerhan, Nansu Zong
2023 — conf
Characterizing the Users of Patient Portal Messaging: A Single Institutional Cohort Study.
ICHI
Ming Huang, Aditya Khurana, George M. Mastorakos, Jiawei Zhou, Nansu Zong, Yue Yu, Julie E. Prigge, Christi A. Patten, Hongfang Liu, Brian Costello
2023 — conf
Classification of Patient Portal Messages with BERT-based Language Models.
ICHI
Yang Ren, Dezhi Wu, Aditya Khurana, George M. Mastorakos, Sunyang Fu, Nansu Zong, Jungwei Fan, Hongfang Liu, Ming Huang
2023 — conf
Detecting Reddit Users with Depression Using a Hybrid Neural Network SBERT-CNN.
ICHI
Ziyi Chen, Ren Yang, Sunyang Fu, Nansu Zong, Hongfang Liu, Ming Huang
2023 J jnl
Detecting Reddit Users with Depression Using a Hybrid Neural Network.
CoRR
Ziyi Chen, Ren Yang, Sunyang Fu, Nansu Zong, Hongfang Liu, Ming Huang
2023 — conf
Evaluating Drug Effectiveness for Antihypertensives in Heart Failure Prognosis: Leveraging Composite Clinical Endpoints and Biomarkers from Electronic Health Records.
BCB
Shaika Chowdhury, Yongbin Chen, Xiao Ma, Qiying Dai, Yue Yu, Nansu Zong
2023 J jnl
Evaluation of GPT-3 for Anti-Cancer Drug Sensitivity Prediction.
CoRR
Shaika Chowdhury, Sivaraman Rajaganapathy, Lichao Sun, James R. Cerhan, Nansu Zong
2023 — conf
FHIR-Ontop-OMOP: Querying OMOP clinical databases as FHIR-compliant Clinical Knowledge Graphs.
SWAT4HCLS
Guohui Xiao, Emily R. Pfaff, Eric Prud'hommeaux, David Booth, Deepak K. Sharma, Nan Huo, Yue Yu, Nansu Zong, Kathryn J. Ruddy, Christopher G. Chute, Guoqian Jiang
2023 — conf
Learning Physician's Treatment for Alzheimer's Disease based on Electronic Health Records and Reinforcement Learning.
ICHI
Kritib Bhattarai, Sivaraman Rajaganapathy, Trisha Das, Yejin Kim, Yongbin Chen, Qiying Dai, Xiaoyang Li, Xiaoqian Jiang, Nansu Zong
2023 J jnl
Using artificial intelligence to learn optimal regimen plan for Alzheimer's disease.
J. Am. Medical Informatics Assoc.
Kritib Bhattarai, Sivaraman Rajaganapathy, Trisha Das, Yejin Kim, Yongbin Chen, Qiying Dai, Xiaoyang Li, Xiaoqian Jiang, Nansu Zong
2022 Misc conf
A Comparative Study on the Capability of Real-World Antineoplastic Drug Data Collection by CanMED, ATC and HemOnc.
AMIA
Yue Yu, Kathryn J. Ruddy, Nan Huo, Nansu Zong, Deirdre Pachman, Christopher G. Chute, Emily R. Pfaff, Andrea Cheville, Guoqian Jiang
2022 J jnl
BETA: a comprehensive benchmark for computational drug-target prediction.
Briefings Bioinform.
Nansu Zong, Ning Li, Andrew Wen, Victoria Ngo, Yue Yu, Ming Huang, Shaika Chowdhury, Chao Jiang, Sunyang Fu, Richard Weinshilboum, Guoqian Jiang, Lawrence Hunter, Hongfang Liu
2022 — conf
Computational Drug Target Prediction: Benchmark and Experiments.
ICHI
Nansu Zong, Victoria Ngo
2022 J jnl
Computational drug repurposing based on electronic health records: a scoping review.
npj Digit. Medicine
Nansu Zong, Andrew Wen, Sungrim Moon, Sunyang Fu, Liwei Wang, Yiqing Zhao, Yue Yu, Ming Huang, Yanshan Wang, Gang Zheng, Michelle M. Mielke, James R. Cerhan, Hongfang Liu
2022 J jnl
Correction to: Characterizing phenotypic abnormalities associated with high-risk individuals developing lung cancer using electronic health records from the All of Us researcher workbench.
J. Am. Medical Informatics Assoc.
Jie Na, Nansu Zong, Chen Wang, David E. Midthun, Yuan Luo, Ping Yang, Guoqian Jiang
2022 J jnl
Developing an ETL tool for converting the PCORnet CDM into the OMOP CDM to facilitate the COVID-19 data integration.
J. Biomed. Informatics
Yue Yu, Nansu Zong, Andrew Wen, Sijia Liu, Daniel J. Stone, David Knaack, Alanna M. Chamberlain, Emily R. Pfaff, Davera Gabriel, Christopher G. Chute, Nilay Shah, Guoqian Jiang
2022 J jnl
FHIR-Ontop-OMOP: Building clinical knowledge graphs in FHIR RDF with the OMOP Common data Model.
J. Biomed. Informatics
Guohui Xiao, Emily R. Pfaff, Eric Prud'hommeaux, David Booth, Deepak K. Sharma, Nan Huo, Yue Yu, Nansu Zong, Kathryn J. Ruddy, Christopher G. Chute, Guoqian Jiang
2022 Misc conf
Modeling a Cancer Symptom Control Domain Using HL7 FHIR: Applicability of the Minimal Common Oncology Data Elements (mCODE).
AMIA
Nan Huo, Yue Yu, Nansu Zong, Andrea Cheville, Claude Nanjo, Eric Prud'hommeaux, Deirdre Pachman, Guohui Xiao, Emily R. Pfaff, Christopher G. Chute, Guoqian Jiang, Kathryn J. Ruddy
2021 Misc conf
Automatic Construction of Biomedical Knowledge Graph from Covid-19 Literature.
AMIA
Chao Jiang, Victoria Ngo, Richard Chapman, Hongfang Liu, Guoqian Jiang, Nansu Zong
2021 J jnl
Characterizing phenotypic abnormalities associated with high-risk individuals developing lung cancer using electronic health records from the All of Us researcher workbench.
J. Am. Medical Informatics Assoc.
Jie Na, Nansu Zong, Chen Wang, David E. Midthun, Yuan Luo, Ping Yang, Guoqian Jiang
2021 Misc conf
Disparity analysis of patient portal messaging use for COVID-19 in urban versus rural locality.
AMIA
Ming Huang, Andrew Wen, Huan He, Liwei Wang, Sijia Liu, Yanshan Wang, Nansu Zong, Yue Yu, Julie E. Prigge, Brian Costello, Nilay D. Shah, Henry Ting, Chyke Doubeni, Jungwei Fan, Hongfang Liu, Christi A. Patten
2021 J jnl
Drug-target prediction utilizing heterogeneous bio-linked network embeddings.
Briefings Bioinform.
Nansu Zong, Rachael Sze Nga Wong, Yue Yu, Andrew Wen, Ming Huang, Ning Li
2021 Misc conf
FHIRTime: Standardizing Temporal Patterns Identified from Clinical Narratives Using HL7 FHIR.
AMIA
Daniel J. Stone, Sijia Liu, Yuan Luo, Andrew Wen, Nansu Zong, Luke V. Rasmussen, Prakash Adekkanattu, Pascal S. Brandt, Jennifer A. Pacheco, Fei Wang, Cui Tao, Jyotishman Pathak, Hongfang Liu, Guoqian Jiang
2021 J jnl
Modeling cancer clinical trials using HL7 FHIR to support downstream applications: A case study with colorectal cancer data.
Int. J. Medical Informatics
Nansu Zong, Daniel J. Stone, Deepak K. Sharma, Andrew Wen, Chen Wang, Yue Yu, Ming Huang, Sijia Liu, Hongfang Liu, Qian Shi, Guoqian Jiang
2021 — conf
The Implication of Latent Information Quality to the Reproducibility of Secondary Use of Electronic Health Records.
MedInfo
Sunyang Fu, Andrew Wen, Sandeep R. Pagali, Nansu Zong, Jennifer St Sauver, Sunghwan Sohn, Jungwei Fan, Hongfang Liu
2018 J jnl
DataMed - an open source discovery index for finding biomedical datasets.
J. Am. Medical Informatics Assoc.
Xiaoling Chen, Anupama E. Gururaj, Ibrahim Burak Özyurt, Ruiling Liu, Ergin Soysal, Trevor Cohen, Firat Tiryaki, Yueling Li, Nansu Zong, Min Jiang, Deevakar Rogith, Mandana Salimi, Hyeon-Eui Kim, Philippe Rocca-Serra, Alejandra N. González-Beltrán, Claudiu Farcas, Todd Johnson, Ronald Margolis, George Alter, Susanna-Assunta Sansone, Ian Fore, Lucila Ohno-Machado, Jeffrey S. Grethe, Hua Xu
2017 J jnl
Constructing faceted taxonomy for heterogeneous entities based on object properties in linked data.
Data Knowl. Eng.
Nansu Zong, Hong-Gee Kim, Sejin Nam
2017 J jnl
Deep mining heterogeneous networks of biomedical linked data to predict novel drug-target associations.
Bioinform.
Nansu Zong, Hyeoneui Kim, Victoria Ngo, Olivier Harismendy
2017 Misc conf
Explorative Analyses on Indexing OMOP based Clinical Datasets with DATS.
AMIA
Ethan Park, Diana Guijarro, Imho Jang, Stephen Trac, Nansu Zong, Hyeoneui Kim
2017 J jnl
Supporting inter-topic entity search for biomedical Linked Data based on heterogeneous relationships.
Comput. Biol. Medicine
Nansu Zong, Sungin Lee, Jinhyun Ahn, Hong-Gee Kim
2017 J jnl
xStore: Federated temporal query processing for large scale RDF triples on a cloud environment.
Neurocomputing
Jinhyun Ahn, Jae-Hong Eom, Sejin Nam, Nansu Zong, Dong-Hyuk Im, Hong-Gee Kim
2016 J jnl
Structuralizing biomedical abstracts with discriminative linguistic features.
Comput. Biol. Medicine
Sejin Nam, Senator Jeong, Sang-Kyun Kim, Hong-Gee Kim, Victoria Ngo, Nansu Zong
2015 J jnl
Aligning ontologies with subsumption and equivalence relations in Linked Data.
Knowl. Based Syst.
Nansu Zong, Sejin Nam, Jae-Hong Eom, Jinhyun Ahn, Hyunwhan Joe, Hong-Gee Kim
2015 J jnl
Discovering expansion entities for keyword-based entity search in linked data.
J. Inf. Sci.
Nansu Zong, Sungin Lee, Hong-Gee Kim
2014 — conf
G-Diff: A Grouping Algorithm for RDF Change Detection on MapReduce.
JIST
Jinhyun Ahn, Dong-Hyuk Im, Jae-Hong Eom, Nansu Zong, Hong-Gee Kim
2013 — conf
A Comparison of Unsupervised Taxonomical Relationship Induction Approaches for Building Ontology in RDF Resources.
JIST
Nansu Zong, Sungin Lee, Hong-Gee Kim
2012 — conf
A hypergraph-based storage policy for RDF version management system.
ICUIMC
Dong-Hyuk Im, Nansu Zong, Eung-Hee Kim, Seokchan Yun, Hong-Gee Kim
2012 — conf
Dynamic generation of concepts hierarchies for knowledge discovering in bio-medical linked data sets.
ICUIMC
Nansu Zong, Dong-Hyuk Im, Sung-Kwon Yang, Hyun Namgoong, Hong-Gee Kim
2011 — conf
Discovering and Ranking New Links for Linked Data Supplier.
JIST
Nansu Zong, Sung-Kwon Yang, Hyun Namgoong, Hong-Gee Kim
2009 — conf
A SWRL Rules Parser Algorithm Based on the Topic Semantic Comparability and Ant Colony Algorithm.
FSKD (2)
Nansu Zong, Yelu Zheng, Zhong Wang