Nanna Maria Sijtsema

18 papers Journal 12Unranked 6
YearRankTypeTitle / Venue / Authors
2025 J jnl
Comput. Medical Imaging Graph.
Alessia De Biase, Nanna Maria Sijtsema, Lisanne van Dijk, Roel Steenbakkers, Johannes A. Langendijk, Peter M. A. van Ooijen
2025 J jnl
Neural Comput. Appl.
Erfan Darzi, Nanna Maria Sijtsema, Peter M. A. van Ooijen
2024 J jnl
Comput. Methods Programs Biomed.
Alessia De Biase, Baoqiang Ma, Jiapan Guo, Lisanne van Dijk, Johannes A. Langendijk, Stefan Both, Peter M. A. van Ooijen, Nanna Maria Sijtsema
2024 J jnl
IEEE Trans. Ind. Informatics
Erfan Darzi, Florian Dubost, Nanna Maria Sijtsema, Peter M. A. van Ooijen
2024 conf
HNTS-MRG@MICCAI
Frank N. Mol, Luuk van der Hoek, Baoqiang Ma, Bharath Chowdhary Nagam, Nanna Maria Sijtsema, Lisanne van Dijk, Kerstin Bunte, Rifka Vlijm, Peter M. A. van Ooijen
2024 J jnl
Comput. Biol. Medicine
Alessia De Biase, Liv Ziegfeld, Nanna Maria Sijtsema, Roel Steenbakkers, Robin Wijsman, Lisanne van Dijk, Johannes A. Langendijk, Fokie Cnossen, Peter M. A. van Ooijen
2024 J jnl
Artif. Intell. Medicine
Erfan Darzi, Yiqing Shen, Yangming Ou, Nanna Maria Sijtsema, Peter M. A. van Ooijen
2023 J jnl
CoRR
Erfan Darzidehkalani, Nanna Maria Sijtsema, Peter M. A. van Ooijen
2023 J jnl
CoRR
Erfan Darzi, Florian Dubost, Nanna Maria Sijtsema, Peter M. A. van Ooijen
2023 J jnl
CoRR
Erfan Darzi, Nanna Maria Sijtsema, Peter M. A. van Ooijen
2023 J jnl
CoRR
Erfan Darzi, Yiqing Shen, Nanna Maria Sijtsema, Peter M. A. van Ooijen
2023 J jnl
CoRR
Erfan Darzi, Florian Dubost, Nanna Maria Sijtsema, Peter M. A. van Ooijen
2023 conf
MIDL
Baoqiang Ma, Jiapan Guo, Lisanne van Dijk, Peter M. A. van Ooijen, Stefan Both, Nanna Maria Sijtsema
2022 conf
HECKTOR@MICCAI
Baoqiang Ma, Yan Li, Hung Chu, Wei Tang, Luis Ricardo De la O. Arévalo, Jiapan Guo, Peter M. A. van Ooijen, Stefan Both, Johannes A. Langendijk, Lisanne van Dijk, Nanna Maria Sijtsema
2022 J jnl
CoRR
Alessia De Biase, Nanna Maria Sijtsema, Lisanne van Dijk, Johannes A. Langendijk, Peter M. A. van Ooijen
2022 conf
HECKTOR@MICCAI
Hung Chu, Luis Ricardo De la O. Arévalo, Wei Tang, Baoqiang Ma, Yan Li, Alessia De Biase, Stefan Both, Johannes A. Langendijk, Peter M. A. van Ooijen, Nanna Maria Sijtsema, Lisanne van Dijk
2021 conf
HECKTOR@MICCAI
Baoqiang Ma, Jiapan Guo, Alessia De Biase, Nikos Sourlos, Wei Tang, Peter M. A. van Ooijen, Stefan Both, Nanna Maria Sijtsema
2021 conf
HECKTOR@MICCAI
Alessia De Biase, Wei Tang, Nikos Sourlos, Baoqiang Ma, Jiapan Guo, Nanna Maria Sijtsema, Peter M. A. van Ooijen
redb/extractors/basicproperties.py
← Index redb/extractors/basicproperties.py python
from dataclasses import asdict
import inspect
import os
import magic
from magika import Magika
from datetime import datetime, timezone
from typing import Any, List, Tuple

from redb.extractors.enum import Tag
from redb.models.dataclasses import BasicProperties
from redb.extractors.extractor import Extractor


class BasicPropertiesExtractor(Extractor):

    def __init__(
        self,
        filepath,
        log,
        exporters=None,
        index_prefix=None,
        elastic_index=None,
        known_benign=False,
        known_malicious=False,
        parent_sha256=None,
        precomputed_hashes=None,
        is_fat=None,
        child_sha256=None,
        child_architecture=None,
        child_filetype=None,
        first_seen=None,
    ):
        super().__init__(
            filepath,
            log,
            exporters=exporters,
            index_prefix=index_prefix,
            elastic_index=elastic_index,
            known_benign=known_benign,
            known_malicious=known_malicious,
            precomputed_hashes=precomputed_hashes,
        )
        self.basic_properties = None
        self.elastic_index = self.index_prefix + "-basic_properties"
        self.is_packed = None
        self.parent_sha256 = parent_sha256  # For FAT Mach-O slices, points to container hash
        self.is_fat = is_fat  # True for FAT Mach-O containers, None otherwise
        self.child_sha256 = child_sha256  # SHA256 hashes of children (FAT slices, zip contents)
        self.child_architecture = child_architecture  # Architecture names for FAT Mach-O slices
        self.child_filetype = child_filetype  # Magika filetypes for children (useful for zip archives)
        self.first_seen = first_seen  # From catalog_samples, None for local files

    def tag(self):
        return Tag.BASIC_PROPERTIES.value

    def _extract_basic_properties(self):
        self.log.debug(inspect.currentframe().f_code.co_name)
        filename = None  # Reserved for future use
        sample_name = os.path.basename(self.filepath)
        file_entropy = round(self.calculate_entropy(self.binary), 3)
        type_ = magic.from_buffer(self.binary)
        type_mime = magic.from_buffer(self.binary, mime=True)
        type_magika = Magika().identify_bytes(self.binary).output.label
        size = len(self.binary)
        self.basic_properties = BasicProperties(
            filename, sample_name, size, type_, type_mime, type_magika,
            file_entropy, self.is_packed, self.is_fat, self.child_sha256,
            self.child_architecture, self.child_filetype,
            first_seen=str(self.first_seen) if self.first_seen else None,
        )
        self.log.debug(f"Basic Properties dump: {asdict(self.basic_properties)}")

    def extract(self):
        self.log.debug(inspect.currentframe().f_code.co_name)
        try:
            self._extract_basic_properties()
            # self.export_to_elastic([self.basic_properties])
            return self.basic_properties
        except Exception as e:
            self.log.error(f"Extract basic properties error {self.hash.sha256} Exception: {e}")
            return None

    def prepare_export_data(self, exporter_type: str) -> Any:
        if exporter_type == "ElasticsearchExporter":
            return self.basic_properties
        elif exporter_type == "ClickHouseExporter":
            data = [[
                self.sha256,
                self.md5,
                self.sha1,
                self.parent_sha256,  # NULL for standalone/FAT, fat_hash for slices
                self.basic_properties.child_sha256 or [],  # SHA256 hashes of children
                self.basic_properties.child_architecture or [],  # Architecture names for FAT slices
                self.basic_properties.child_filetype or [],  # Magika filetypes for children
                self.basic_properties.is_fat,  # True for FAT Mach-O containers, NULL otherwise
                self.basic_properties.filename,
                self.basic_properties.sample_name,
                self.basic_properties.filesize,
                self.basic_properties.file_entropy,
                self.basic_properties.filetype,
                self.basic_properties.filetype_mime,
                self.basic_properties.filetype_magika,
                self.first_seen or datetime(1970, 1, 1, tzinfo=timezone.utc),  # From catalog_samples, epoch zero for local files (uses original datetime, not string)
                datetime.now(timezone.utc)
            ]]

            column_names = [
                'sha256', 'md5', 'sha1', 'parent_sha256', 'child_sha256', 'child_architecture', 'child_filetype',
                'is_fat', 'filename', 'sample_name',
                'filesize', 'file_entropy', 'filetype', 'filetype_mime',
                'filetype_magika', 'first_seen', 'analysis_date'
            ]

            column_type_names = [
                'String', 'String', 'String', 'Nullable(String)',
                'Array(FixedString(64))', 'Array(LowCardinality(String))', 'Array(LowCardinality(String))',
                'Nullable(UInt8)', 'Nullable(String)', 'String',
                'UInt64', 'Float64', 'LowCardinality(String)',
                'LowCardinality(String)', 'LowCardinality(String)',
                'DateTime64(3, \'UTC\')',
                'DateTime64(3, \'UTC\')'
            ]

            return data, column_names, column_type_names

    def get_clickhouse_table(self) -> str:
        return "redb_basic_properties"