Nalini Schaduangrat

19 papers Journal 19

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	A comprehensive review and evaluation of machine learning-based approaches for identifying tumor T cell antigens. Comput. Biol. Chem. Watshara Shoombuatong, Saeed Ahmed, S. M. Hasan Mahmud, Nalini Schaduangrat
2025	J	`jnl`	ACSMPred-FRL: Accelerating the Identification of Anticancer Small Molecules Using Feature Representation Learning. IEEE Access Watshara Shoombuatong, Nalini Schaduangrat, Lawankorn Mookdarsanit, S. M. Hasan Mahmud, Kanthida Kusonmano, Pakpoom Mookdarsanit
2025	J	`jnl`	DeepHDAC3i: Leveraging an Interpretable Deep Learning-Based Framework for the Accelerated Discovery of HDAC3 Inhibitors. IEEE Trans. Comput. Biol. Bioinform. Saeed Ahmed, Nalini Schaduangrat, Ittipat Meewan, Watshara Shoombuatong
2025	J	`jnl`	Explainable AI-driven prediction of influenza neuraminidase inhibitors using a stacked ensemble-learning framework. Comput. Biol. Medicine Ittipat Meewan, Nalini Schaduangrat, Lawankorn Mookdarsanit, Pakpoom Mookdarsanit, Watshara Shoombuatong
2025	J	`jnl`	M3S-ALG: Improved and robust prediction of allergenicity of chemical compounds by using a novel multi-step stacking strategy. Future Gener. Comput. Syst. Phasit Charoenkwan, Nalini Schaduangrat, Le Thi Phan, Balachandran Manavalan, Watshara Shoombuatong
2025	J	`jnl`	M3S-GRPred: a novel ensemble learning approach for the interpretable prediction of glucocorticoid receptor antagonists using a multi-step stacking strategy. BMC Bioinform. Nalini Schaduangrat, Hathaichanok Chuntakaruk, Thanyada Rungrotmongkol, Pakpoom Mookdarsanit, Watshara Shoombuatong
2025	J	`jnl`	iMRSA-Fuse: A Fast and Accurate Computational Approach for Predicting Anti-MRSA Peptides by Fusing Multi-View Information. IEEE Trans. Comput. Biol. Bioinform. Phasit Charoenkwan, Nalini Schaduangrat, Mohammad Ali Moni, Watshara Shoombuatong
2024	J	`jnl`	The role of ncRNA regulatory mechanisms in diseases - case on gestational diabetes. Briefings Bioinform. Dong Gao, Liping Ren, Yu-Duo Hao, Nalini Schaduangrat, Xiao-Wei Liu, Shi-Shi Yuan, Yu-He Yang, Yan Wang, Watshara Shoombuatong, Hui Ding
2023	J	`jnl`	DeepAR: a novel deep learning-based hybrid framework for the interpretable prediction of androgen receptor antagonists. J. Cheminformatics Nalini Schaduangrat, Nuttapat Anuwongcharoen, Phasit Charoenkwan, Watshara Shoombuatong
2023	J	`jnl`	PSRQSP: An effective approach for the interpretable prediction of quorum sensing peptide using propensity score representation learning. Comput. Biol. Medicine Phasit Charoenkwan, Pramote Chumnanpuen, Nalini Schaduangrat, Changmin Oh, Balachandran Manavalan, Watshara Shoombuatong
2023	J	`jnl`	StackTTCA: a stacking ensemble learning-based framework for accurate and high-throughput identification of tumor T cell antigens. BMC Bioinform. Phasit Charoenkwan, Nalini Schaduangrat, Watshara Shoombuatong
2023	J	`jnl`	TIPred: a novel stacked ensemble approach for the accelerated discovery of tyrosinase inhibitory peptides. BMC Bioinform. Phasit Charoenkwan, Sasikarn Kongsompong, Nalini Schaduangrat, Pramote Chumnanpuen, Watshara Shoombuatong
2022	J	`jnl`	Improved prediction and characterization of blood-brain barrier penetrating peptides using estimated propensity scores of dipeptides. J. Comput. Aided Mol. Des. Phasit Charoenkwan, Pramote Chumnanpuen, Nalini Schaduangrat, Pietro Lio', Mohammad Ali Moni, Watshara Shoombuatong
2022	J	`jnl`	NEPTUNE: A novel computational approach for accurate and large-scale identification of tumor homing peptides. Comput. Biol. Medicine Phasit Charoenkwan, Nalini Schaduangrat, Pietro Lio', Mohammad Ali Moni, Balachandran Manavalan, Watshara Shoombuatong
2022	J	`jnl`	SAPPHIRE: A stacking-based ensemble learning framework for accurate prediction of thermophilic proteins. Comput. Biol. Medicine Phasit Charoenkwan, Nalini Schaduangrat, Mohammad Ali Moni, Pietro Lio', Balachandran Manavalan, Watshara Shoombuatong
2020	J	`jnl`	HCVpred : A web server for predicting the bioactivity of hepatitis C virus NS5B inhibitors. J. Comput. Chem. Aijaz Ahmad Malik, Chuleeporn Phanus-umporn, Nalini Schaduangrat, Watshara Shoombuatong, Chartchalerm Isarankura-Na-Ayudhya, Chanin Nantasenamat
2020	J	`jnl`	HLPpred-Fuse: improved and robust prediction of hemolytic peptide and its activity by fusing multiple feature representation. Bioinform. Md. Mehedi Hasan, Nalini Schaduangrat, Shaherin Basith, Gwang Lee, Watshara Shoombuatong, Balachandran Manavalan
2020	J	`jnl`	Towards reproducible computational drug discovery. J. Cheminformatics Nalini Schaduangrat, Samuel Lampa, Saw Simeon, Matthew Paul Gleeson, Ola Spjuth, Chanin Nantasenamat
2019	J	`jnl`	THPep: A machine learning-based approach for predicting tumor homing peptides. Comput. Biol. Chem. Watshara Shoombuatong, Nalini Schaduangrat, Reny Pratiwi, Chanin Nantasenamat