Nagi Gebraeel

67 papers A* 1A 1C 1Misc 1Journal 59Unranked 4
YearRankTypeTitle / Venue / Authors
2026 J jnl
CoRR
Michael Ibrahim, Nagi Gebraeel, Weijun Xie
2026 J jnl
Eur. J. Oper. Res.
Heraldo Rozas, Weijun Xie, Nagi Gebraeel, Stephen K. Robinson
2026 J jnl
CoRR
Nazal Mohamed, Ayush Mohanty, Nagi Gebraeel
2026 J jnl
CoRR
Ayse Tursucular, Ayush Mohanty, Nazal Mohamed, Nagi Gebraeel
2026 J jnl
CoRR
Ayush Mohanty, Paritosh Ramanan, Nagi Gebraeel
2026 J jnl
IEEE Trans. Syst. Man Cybern. Syst.
Ayush Mohanty, Jason Dekarske, Stephen K. Robinson, Sanjay S. Joshi, Nagi Gebraeel
2026 J jnl
CoRR
Ayush Mohanty, Nazal Mohamed, Nagi Gebraeel
2025 J jnl
IEEE Trans. Reliab.
Michael Ibrahim, Heraldo Rozas, Nagi Gebraeel
2025 J jnl
IEEE Trans. Instrum. Meas.
Rourou Li, Tangbin Xia, Yimin Jiang, Jianhua Wu, Xiaolei Fang, Nagi Gebraeel, Lifeng Xi
2025 A conf
UAI
Michael Ibrahim, Heraldo Rozas, Nagi Gebraeel, Weijun Xie
2025 A* conf
ICLR
Ayush Mohanty, Nazal Mohamed, Paritosh Ramanan, Nagi Gebraeel
2025 J jnl
CoRR
Ayush Mohanty, Nazal Mohamed, Paritosh Ramanan, Nagi Gebraeel
2025 J jnl
IEEE Trans. Reliab.
Heraldo Rozas, Nagi Gebraeel, Weijun Xie
2024 J jnl
IEEE Trans. Reliab.
Kaigan Zhang, Tangbin Xia, Guojin Si, Nagi Gebraeel, Dong Wang, Ershun Pan, Lifeng Xi
2024 J jnl
CoRR
Michael Ibrahim, Heraldo Rozas, Nagi Gebraeel, Weijun Xie
2024 J jnl
Adv. Eng. Informatics
Kaigan Zhang, Tangbin Xia, Yuhui Xu, Yutong Ding, Yong Zhao, Nagi Gebraeel, Lifeng Xi
2024 J jnl
Int. J. Prod. Res.
Sakir Karakaya, Murat Yildirim, Nagi Gebraeel, Tangbin Xia
2024 J jnl
Manuf. Serv. Oper. Manag.
Beste Basciftci, Shabbir Ahmed, Nagi Gebraeel
2024 J jnl
J. Comput. Inf. Sci. Eng.
Michael Ibrahim, Heraldo Rozas, Nagi Gebraeel
2024 J jnl
CoRR
Ayush Mohanty, Jason Dekarske, Stephen K. Robinson, Sanjay S. Joshi, Nagi Gebraeel
2024 J jnl
CoRR
Benjamin Peters, Ayush Mohanty, Xiaolei Fang, Stephen K. Robinson, Nagi Gebraeel
2024 J jnl
CoRR
Michael Ibrahim, Heraldo Rozas, Nagi Gebraeel
2023 J jnl
IEEE Trans. Control. Netw. Syst.
Paritosh Ramanan, Murat Yildirim, Nagi Gebraeel, Edmond Chow
2023 conf
IEEM
Shu Wang, Mulang Song, Yiyun Fei, Dandan Zhang, Feng Zhou, Nagi Gebraeel, Jianxin Jiao
2022 J jnl
Reliab. Eng. Syst. Saf.
Guojin Si, Tangbin Xia, Nagi Gebraeel, Dong Wang, Ershun Pan, Lifeng Xi
2022 J jnl
IEEE Trans. Syst. Man Cybern. Syst.
Paritosh Ramanan, Dan Li, Nagi Gebraeel
2021 J jnl
IISE Trans.
Dan Li, Kamran Paynabar, Nagi Gebraeel
2021 J jnl
CoRR
Dan Li, Nagi Gebraeel, Kamran Paynabar, A. P. Sakis Meliopoulos
2021 J jnl
IEEE Trans Autom. Sci. Eng.
Dan Li, Nagi Gebraeel, Kamran Paynabar
2021 J jnl
IEEE Trans. Ind. Electron.
Naipeng Li, Yaguo Lei, Nagi Gebraeel, Zhijian Wang, Xiao Cai, Pengcheng Xu, Biao Wang
2021 J jnl
IISE Trans.
Xiaolei Fang, Hao Yan, Nagi Gebraeel, Kamran Paynabar
2021 J jnl
IEEE Trans. Smart Grid
Kavya Ashok, Dan Li, Nagi Gebraeel, Deepak Divan
2021 J jnl
Reliab. Eng. Syst. Saf.
Naipeng Li, Nagi Gebraeel, Yaguo Lei, Xiaolei Fang, Xiao Cai, Tao Yan
2020 J jnl
CoRR
Paritosh Ramanan, Dan Li, Nagi Gebraeel
2020 J jnl
IISE Trans.
Beste Basciftci, Shabbir Ahmed, Nagi Gebraeel
2020 J jnl
CoRR
Paritosh Ramanan, Murat Yildirim, Nagi Gebraeel, Edmond Chow
2020 C conf
ICMLA
Dan Li, Paritosh Ramanan, Nagi Gebraeel, Kamran Paynabar
2020 J jnl
CoRR
Dan Li, Paritosh Ramanan, Nagi Gebraeel, Kamran Paynabar
2020 conf
ISGT
Kavya Ashok, Dan Li, Deepak Divan, Nagi Gebraeel
2020 J jnl
CoRR
Paritosh Ramanan, Murat Yildirim, Nagi Gebraeel, Edmond Chow
2020 J jnl
Reliab. Eng. Syst. Saf.
Benjamin Peters, Murat Yildirim, Nagi Gebraeel, Kamran Paynabar
2019 J jnl
CoRR
Paritosh Ramanan, Murat Yildirim, Edmond Chow, Nagi Gebraeel
2019 J jnl
IEEE Trans Autom. Sci. Eng.
Iqra Ejaz, Michelle M. Alvarado, Natarajan Gautam, Nagi Gebraeel, Mark Lawley
2019 J jnl
Technometrics
Xiaolei Fang, Kamran Paynabar, Nagi Gebraeel
2019 J jnl
Reliab. Eng. Syst. Saf.
Naipeng Li, Nagi Gebraeel, Yaguo Lei, Linkan Bian, Xiaosheng Si
2018 J jnl
Ann. Oper. Res.
Yang Cao, Yao Xie, Nagi Gebraeel
2017 Misc conf
ICCS
Paritosh Ramanan, Murat Yildirim, Edmond Chow, Nagi Gebraeel
2017 J jnl
IEEE Trans Autom. Sci. Eng.
Li Hao, Kaibo Liu, Nagi Gebraeel, Jianjun Shi
2017 J jnl
Reliab. Eng. Syst. Saf.
Xiaolei Fang, Kamran Paynabar, Nagi Gebraeel
2017 J jnl
IEEE Trans Autom. Sci. Eng.
Li Hao, Linkan Bian, Nagi Gebraeel, Jianjun Shi
2017 conf
IPDPS Workshops
Paras Jain, Chirag Tailor, Sam Ford, Liexiao Ding, Michael Phillips, Fang (Cherry) Liu, Nagi Gebraeel, Duen Horng Chau
2017 J jnl
CoRR
Paras Jain, Chirag Tailor, Sam Ford, Liexiao Ding, Michael Phillips, Fang (Cherry) Liu, Nagi Gebraeel, Duen Horng Chau
2015 J jnl
Reliab. Eng. Syst. Saf.
Xiaolei Fang, Rensheng Zhou, Nagi Gebraeel
2015 J jnl
CoRR
Yang Cao, Yao Xie, Nagi Gebraeel
2014 J jnl
Technometrics
Rensheng Zhou, Nicoleta Serban, Nagi Gebraeel, Hans-Georg Müller
2013 J jnl
IEEE Trans Autom. Sci. Eng.
Kaibo Liu, Nagi Gebraeel, Jianjun Shi
2013 J jnl
Stat. Anal. Data Min.
Linkan Bian, Nagi Gebraeel
2011 conf
CIDU
Linkan Bian, Nagi Gebraeel
2010 J jnl
IEEE Trans Autom. Sci. Eng.
Nagi Gebraeel
2009 J jnl
IEEE Trans. Syst. Man Cybern. Part A
Kevin A. Kaiser, Nagi Gebraeel
2009 J jnl
IEEE Trans. Reliab.
Nagi Gebraeel, Alaa Elwany, Jing Pan
2008 J jnl
IEEE Trans Autom. Sci. Eng.
Nagi Gebraeel, Mark A. Lawley
2008 J jnl
IEEE Trans. Reliab.
Nagi Gebraeel, Jing Pan
2007 J jnl
IEEE Trans. Syst. Man Cybern. Part A
Sze-jung Wu, Nagi Gebraeel, Mark A. Lawley, Yuehwern Yih
2006 J jnl
IEEE Trans Autom. Sci. Eng.
Nagi Gebraeel
2004 J jnl
IEEE Trans. Ind. Electron.
Nagi Gebraeel, Mark A. Lawley, Richard Liu, Vijay Parmeshwaran
2001 J jnl
IEEE Trans. Robotics Autom.
Nagi Gebraeel, Mark A. Lawley
redb/extractors/decompiler/_archive/DecompileGhidra-old.py
← Index redb/extractors/decompiler/_archive/DecompileGhidra-old.py python
from hashlib import sha256
import inspect
from pathlib import Path
import subprocess
import json
import subprocess
import json
import os
import tempfile
import uuid
import shutil
import time

from dotenv import load_dotenv

from redb.extractors.enum import Tag
from redb.models.dataclasses import Decompiled
from redb.extractors.extractor import Extractor


class DecompileGhidra(Extractor):
    def __init__(
        self,
        filepath,
        log,
        index_prefix=None,
        elastic_index=None,
        known_benign=False,
        known_malicious=False,
    ):
        super().__init__(
            filepath, log, index_prefix, elastic_index, known_benign, known_malicious
        )
        self.log.debug(inspect.currentframe().f_code.co_name)
        self.elastic_index = self.index_prefix + "-ghidra"
        self.ghidra_path = "/opt/ghidra"
        self.java_script_path = (
            self.ghidra_path
            + "/Ghidra/Features/Base/ghidra_scripts/GhidraDecompilerScript.java"
        )
        self.decompiled = None
        load_dotenv()
        self.decompiled_folder = os.getenv("DECOMPILED_FOLDER", "/opt/decompiled")
        self.log.debug(f"Decompiled folder: {self.decompiled_folder}")

    def run_command(self, cmd, env=None):
        try:
            self.log.info(f"Starting command: {' '.join(cmd)}")
            start_time = time.time()
            TIMEOUT = 1200  # 20 minutes in seconds
            process = subprocess.Popen(
                cmd, env=env, stdout=subprocess.PIPE, stderr=subprocess.PIPE, text=True
            )

            while True:
                output = process.stdout.readline()
                if output:
                    print(output.strip())
                if process.poll() is not None:
                    break
            try:
                stdout, stderr = process.communicate(timeout=TIMEOUT)
            except subprocess.TimeoutExpired:
                process.kill()
                self.log.error(f"Ghidra timed out after {TIMEOUT} seconds")
                # raise subprocess.TimeoutExpired(process.args, TIMEOUT)
                return None
            end_time = time.time()

            self.log.debug(
                f"Command finished. Execution time: {end_time - start_time:.2f} seconds"
            )
            self.log.debug(f"Return code: {process.returncode}")

            if process.returncode != 0:
                self.log.error(f"Error output:\n{stderr}")
                return None
            return stdout
        except Exception as e:
            self.log.error(f"Error running command {' '.join(cmd)}: {e}")
            return None

    def analyze_binary(self):
        self.log.debug(f"Ghidra path: {self.ghidra_path}")
        self.log.debug(f"Binary path: {self.filepath}")
        self.log.debug(f"Java script path: {self.java_script_path}")

        # Check if Java script exists
        if not os.path.exists(self.java_script_path):
            self.log.error(f"Error: Java script not found at {self.java_script_path}")
            return None

        # Set up environment variables
        env = os.environ.copy()
        java_home = "/usr/lib/jvm/java-17-openjdk-amd64"  # Adjust this path if needed
        env["JAVA_HOME"] = java_home
        env["PATH"] = f"{java_home}/bin:{env['PATH']}"
        env["LD_LIBRARY_PATH"] = f"{java_home}/lib:{env.get('LD_LIBRARY_PATH', '')}"
        env["DECOMPILED_FOLDER"] = self.decompiled_folder

        # Print environment variables for debugging
        self.log.debug(f"JAVA_HOME: {env['JAVA_HOME']}")
        self.log.debug(f"PATH: {env['PATH']}")
        self.log.debug(f"LD_LIBRARY_PATH: {env['LD_LIBRARY_PATH']}")

        # Check Ghidra installation
        analyzeHeadless_path = f"{self.ghidra_path}/support/analyzeHeadless"
        self.log.debug(
            f"analyzeHeadless exists: {os.path.exists(analyzeHeadless_path)}"
        )

        # Create a temporary project directory
        project_path = tempfile.gettempdir() + "/ghidra_" + str(uuid.uuid4())
        os.makedirs(project_path, exist_ok=True)
        self.log.debug(f"Created temporary project path: {project_path}")
        output_file = ""

        try:
            # Run Ghidra's headless analyzer
            analyze_cmd = [
                analyzeHeadless_path,
                project_path,
                "TempProject",
                "-import",
                self.filepath,
                "-postScript",
                self.java_script_path,
                self.sha256,
                "-deleteProject",
            ]

            result = self.run_command(analyze_cmd, env=env)
            if result is None:
                return None

            # Read the output JSON file
            output_file = os.path.join(
                self.decompiled_folder, self.sha256 + "-decompiled.json"
            )
            if os.path.exists(output_file):
                with open(output_file, "r") as f:
                    functions = json.load(f)
                return functions
            else:
                self.log.error(
                    f"Output file {output_file} not found. Ghidra analysis may have failed."
                )
                return None
        finally:
            # Clean up
            if os.path.exists(project_path):
                shutil.rmtree(project_path)
                self.log.debug(f"Deleted temporary project path: {project_path}")

    def extract(self):
        self.log.debug(inspect.currentframe().f_code.co_name)
        try:
            functions = self.analyze_binary()

            if functions:
                self.log.info(f"Extracted functions from {self.filepath}:")
                for func in functions:
                    id = sha256(func["address"].encode()).hexdigest()
                    self.decompiled = Decompiled(
                        _id=id,
                        decompiled_function_name=func["name"],
                        decompiled_function_address=func["address"],
                        decompiled_function=func["decompiled"],
                    )
                    self.export_to_elastic([self.decompiled])
            else:
                self.log.error("No decompiled functions extracted.")
            return True
        except Exception as e:
            self.log.error(f"Error extracting decompiled information: {e}")
            return None

    def tag(self):
        return Tag.DECOMPILED.value