Nagasuma R. Chandra

19 papers A* 1Journal 17Unranked 1
YearRankTypeTitle / Venue / Authors
2015 J jnl
CHEXVIS: a tool for molecular channel extraction and visualization.
BMC Bioinform.
Talha Bin Masood, Sankaran Sandhya, Nagasuma R. Chandra, Vijay Natarajan
2015 J jnl
Mechanism of Iron-Dependent Repressor (IdeR) Activation and DNA Binding: A Molecular Dynamics and Protein Structure Network Study.
PLoS Comput. Biol.
Soma Ghosh, Nagasuma R. Chandra, Saraswathi Vishveshwara
2015 J jnl
NrichD database: sequence databases enriched with computationally designed protein-like sequences aid in remote homology detection.
Nucleic Acids Res.
Richa Mudgal, Sankaran Sandhya, Gayatri Kumar, Ramanathan Sowdhamini, Nagasuma R. Chandra, Narayanaswamy Srinivasan
2015 J jnl
SInCRe - structural interactome computational resource for
Database J. Biol. Databases Curation
Rahul Metri, Sridhar Hariharaputran, Gayatri Ramakrishnan, Praveen Anand, Upadhyayula S. Raghavender, Bernardo Ochoa-Montaño, Alicia P. Higueruelo, Ramanathan Sowdhamini, Nagasuma R. Chandra, Tom L. Blundell, Narayanaswamy Srinivasan
2014 J jnl
PLIC: protein-ligand interaction clusters.
Database J. Biol. Databases Curation
Praveen Anand, Deepesh Nagarajan, Sumanta Mukherjee, Nagasuma R. Chandra
2013 J jnl
A multi-level multi-scale approach to study essential genes in Mycobacterium tuberculosis.
BMC Syst. Biol.
Soma Ghosh, Priyanka Baloni, Sumanta Mukherjee, Praveen Anand, Nagasuma R. Chandra
2013 J jnl
Current trends in modeling host-pathogen interactions.
WIREs Data Mining Knowl. Discov.
Sumanta Mukherjee, Awanti Sambarey, Karyala Prashanthi, Nagasuma R. Chandra
2012 J jnl
PocketAnnotate: towards site-based function annotation.
Nucleic Acids Res.
Praveen Anand, Kalidas Yeturu, Nagasuma R. Chandra
2011 J jnl
PocketAlign A Novel Algorithm for Aligning Binding Sites in Protein Structures.
J. Chem. Inf. Model.
Kalidas Yeturu, Nagasuma R. Chandra
2010 J jnl
An automated framework for understanding structural variations in the binding grooves of MHC class II molecules.
BMC Bioinform.
Kalidas Yeturu, Tapani Utriainen, Graham J. L. Kemp, Nagasuma R. Chandra
2010 — conf
Enhanced flux balance analysis to model metabolic networks.
BCB
Nishanth Ulhas Nair, Navin Goyal, Nagasuma R. Chandra
2009 J jnl
A linear programming approach for estimating the structure of a sparse linear genetic network from transcript profiling data.
Algorithms Mol. Biol.
Sahely Bhadra, Chiranjib Bhattacharyya, Nagasuma R. Chandra, I. Saira Mian
2009 J jnl
Flux balance analysis of biological systems: applications and challenges.
Briefings Bioinform.
Karthik Raman, Nagasuma R. Chandra
2008 J jnl
PocketMatch: A new algorithm to compare binding sites in protein structures.
BMC Bioinform.
Kalidas Yeturu, Nagasuma R. Chandra
2008 J jnl
targetTB: A target identification pipeline for Mycobacterium tuberculosis through an interactome, reactome and genome-scale structural analysis.
BMC Syst. Biol.
Karthik Raman, Kalidas Yeturu, Nagasuma R. Chandra
2007 J jnl
Comparison of protein structures by growing neighborhood alignments.
BMC Bioinform.
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, Nagasuma R. Chandra
2007 A* conf
Structural alignment based kernels for protein structure classification.
ICML
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, Nagasuma R. Chandra
2006 J jnl
Projections for fast protein structure retrieval.
BMC Bioinform.
Sourangshu Bhattacharya, Chiranjib Bhattacharyya, Nagasuma R. Chandra
2005 J jnl
Flux Balance Analysis of Mycolic Acid Pathway: Targets for Anti-Tubercular Drugs.
PLoS Comput. Biol.
Karthik Raman, Preethi Rajagopalan, Nagasuma R. Chandra