Nae-Chyun Chen

11 papers C 2Journal 3Unranked 6
YearRankTypeTitle / Venue / Authors
2023 J jnl
Improving variant calling using population data and deep learning.
BMC Bioinform.
Nae-Chyun Chen, Alexey Kolesnikov, Sidharth Goel, Taedong Yun, Pi-Chuan Chang, Andrew Carroll
2021 J jnl
A Memory-Efficient FM-Index Constructor for Next-Generation Sequencing Applications on FPGAs.
CoRR
Nae-Chyun Chen, Yu-Cheng Li, Yi-Chang Lu
2021 J jnl
LevioSAM: fast lift-over of variant-aware reference alignments.
Bioinform.
Taher Mun, Nae-Chyun Chen, Ben Langmead
2018 C conf
A Hybrid Flow for Multiple Sequence Alignment with a BLASTn Based Pairwise Alignment Processor.
ISCAS
Mao-Jan Lin, Chih-Yu Chang, Yu-Cheng Li, Nae-Chyun Chen, Yi-Chang Lu
2018 C conf
A Memory-Efficient FM-Index Constructor for Next-Generation Sequencing Applications on FPGAs.
ISCAS
Nae-Chyun Chen, Yu-Cheng Li, Yi-Chang Lu
2018 — conf
Adaptively Banded Smith-Waterman Algorithm for Long Reads and Its Hardware Accelerator.
ASAP
Yi-Lun Liao, Yu-Cheng Li, Nae-Chyun Chen, Yi-Chang Lu
2016 — conf
A special processor design for Nucleotide Basic Local Alignment Search Tool with a new Banded two-hit method.
NORCAS
Chih-Yu Chang, Yu-Cheng Li, Nae-Chyun Chen, Xiao-Xuan Huang, Yi-Chang Lu
2016 — conf
An FPGA-based quality filter for de novo sequence assembly pipeline.
APCCAS
Chun-Shen Liu, Nae-Chyun Chen, Yu-Cheng Li, Yi-Chang Lu
2016 — conf
Queue-based segmentation algorithm for refining depth maps in light field camera applications.
GCCE
Yi-Hsiang Chen, Nae-Chyun Chen, Yu-Hsiang Kao, Yu-Cheng Li, Yi-Chang Lu
2016 — conf
Step shift: A fast image segmentation algorithm and its hardware implementation for next-generation sequencing fluorescence data.
APCCAS
Xiao-Xuan Huang, Chun-Hsien Ho, Yu-Cheng Li, Nae-Chyun Chen, Yi-Chang Lu
2015 — conf
Power efficient special processor design for burrows-wheeler-transform-based short read sequence alignment.
BioCAS
Nae-Chyun Chen, Tai-Yin Chiu, Yu-Cheng Li, Yu-Chun Chien, Yi-Chang Lu