Muhammad Shaban

27 papers Journal 16Unranked 10

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	A Foundation Model for Spatial Proteomics. CoRR Muhammad Shaban, Yuzhou Chang, Huaying Qiu, Yao Yu Yeo, Andrew H. Song, Guillaume Jaume, Yuchen Wang, Luca L. Weishaupt, Tong Ding, Anurag Vaidya, Abdallah Lamane, Daniel Shao, Mohammed Zidane, Yunhao Bai, Paige McCallum, Shuli Luo, Wenrui Wu, Yang Wang, Precious Cramer, Chi Ngai Chan, Pierre Stéphan, Johanna Schaffenrath, Jia Le Lee, Hendrik A. Michel, Caiwei Tian, Cristina Almagro-Pérez, Sophia J. Wagner, Sharifa Sahai, Ming Y. Lu, Richard J. Chen, Andrew Zhang, Mark Edward M. Gonzales, Ahmad Makky, Jia-Ying Joey Lee, Hao Cheng, Nourhan El Ahmar, Sayed Matar, Maximilian Haist, Darci Phillips, Yuqi Tan, Garry P. Nolan, W. Richard Burack, Jacob D. Estes, Jonathan T. C. Liu, Toni K. Choueiri, Neeraj Agarwal, Marc Barry, Scott J. Rodig, Long Phi Le, Georg Gerber, Christian M. Schürch, Fabian J. Theis, Youn H. Kim, Joe Yeong, Sabina Signoretti, Brooke E. Howitt, Lit-Hsin Loo, Qin Ma, Sizun Jiang, Faisal Mahmood
2024	J	`jnl`	Multimodal Whole Slide Foundation Model for Pathology. CoRR Tong Ding, Sophia J. Wagner, Andrew H. Song, Richard J. Chen, Ming Y. Lu, Andrew Zhang, Anurag J. Vaidya, Guillaume Jaume, Muhammad Shaban, Ahrong Kim, Drew F. K. Williamson, Bowen Chen, Cristina Almagro-Pérez, Paul Doucet, Sharifa Sahai, Chengkuan Chen, Daisuke Komura, Akihiro Kawabe, Shumpei Ishikawa, Georg Gerber, Tingying Peng, Long Phi Le, Faisal Mahmood
2023	J	`jnl`	A General-Purpose Self-Supervised Model for Computational Pathology. CoRR Richard J. Chen, Tong Ding, Ming Y. Lu, Drew F. K. Williamson, Guillaume Jaume, Bowen Chen, Andrew Zhang, Daniel Shao, Andrew H. Song, Muhammad Shaban, Mane Williams, Anurag Vaidya, Sharifa Sahai, Lukas Oldenburg, Luca L. Weishaupt, Judy J. Wang, Walt Williams, Long Phi Le, Georg Gerber, Faisal Mahmood
2022	—	`conf`	A Novel Framework for Coarse-Grained Semantic Segmentation of Whole-Slide Images. MIUA Raja Muhammad Saad Bashir, Muhammad Shaban, Shan E Ahmed Raza, Syed Ali Khurram, Nasir M. Rajpoot
2021	J	`jnl`	A digital score of tumour-associated stroma infiltrating lymphocytes predicts survival in head and neck squamous cell carcinoma. CoRR Muhammad Shaban, Shan E Ahmed Raza, Mariam Hassan, Arif Jamshed, Sajid Mushtaq, Asif Loya, Nikolaos Batis, Jill Brooks, Paul Nankivell, Neil Sharma, Max Robinson, Hisham Mehanna, Syed Ali Khurram, Nasir M. Rajpoot
2021	J	`jnl`	Pan-Cancer Integrative Histology-Genomic Analysis via Interpretable Multimodal Deep Learning. CoRR Richard J. Chen, Ming Y. Lu, Drew F. K. Williamson, Tiffany Y. Chen, Jana Lipková, Muhammad Shaban, Maha Shady, Mane Williams, Bumjin Joo, Zahra Noor, Faisal Mahmood
2021	—	`conf`	Simple non-iterative clustering and CNNs for coarse segmentation of breast cancer whole-slide images. Digital Pathology Rawan Albusayli, J. Dinny Graham, Nirmala Pathmanathan, Muhammad Shaban, Fayyaz Minhas, Jane E. Armes, Nasir M. Rajpoot
2021	—	`conf`	Whole Slide Images are 2D Point Clouds: Context-Aware Survival Prediction Using Patch-Based Graph Convolutional Networks. MICCAI (8) Richard J. Chen, Ming Y. Lu, Muhammad Shaban, Chengkuan Chen, Tiffany Y. Chen, Drew F. K. Williamson, Faisal Mahmood
2021	J	`jnl`	Whole Slide Images are 2D Point Clouds: Context-Aware Survival Prediction using Patch-based Graph Convolutional Networks. CoRR Richard J. Chen, Ming Y. Lu, Muhammad Shaban, Chengkuan Chen, Tiffany Y. Chen, Drew F. K. Williamson, Faisal Mahmood
2020	—	`conf`	Automated grade classification of oral epithelial dysplasia using morphometric analysis of histology images. Digital Pathology Raja Muhammad Saad Bashir, Hanya Mahmood, Muhammad Shaban, Shan-E-Ahmed Raza, Muhammad Moazam Fraz, Syed Ali Khurram, Nasir M. Rajpoot
2020	J	`jnl`	Context-Aware Convolutional Neural Network for Grading of Colorectal Cancer Histology Images. IEEE Trans. Medical Imaging Muhammad Shaban, Ruqayya Awan, Muhammad Moazam Fraz, Ayesha Azam, Yee-Wah Tsang, David R. J. Snead, Nasir M. Rajpoot
2020	J	`jnl`	FABnet: feature attention-based network for simultaneous segmentation of microvessels and nerves in routine histology images of oral cancer. Neural Comput. Appl. M. M. Fraz, Syed Ali Khurram, Simon Graham, Muhammad Shaban, Mariam Hassan, Asif Loya, Nasir M. Rajpoot
2020	—	`—`	Spatial context in computational pathology. Muhammad Shaban
2019	J	`jnl`	An information fusion framework for person localization via body pose in spectator crowds. Inf. Fusion Muhammad Shaban, Arif Mahmood, Somaya Ali Al-Máadeed, Nasir M. Rajpoot
2019	—	`conf`	CGC-Net: Cell Graph Convolutional Network for Grading of Colorectal Cancer Histology Images. ICCV Workshops Yanning Zhou, Simon Graham, Navid Alemi Koohbanani, Muhammad Shaban, Pheng-Ann Heng, Nasir M. Rajpoot
2019	J	`jnl`	CGC-Net: Cell Graph Convolutional Network for Grading of Colorectal Cancer Histology Images. CoRR Yanning Zhou, Simon Graham, Navid Alemi Koohbanani, Muhammad Shaban, Pheng-Ann Heng, Nasir M. Rajpoot
2019	J	`jnl`	Context-Aware Convolutional Neural Network for Grading of Colorectal Cancer Histology Images. CoRR Muhammad Shaban, Ruqayya Awan, Muhammad Moazam Fraz, Ayesha Azam, David R. J. Snead, Nasir M. Rajpoot
2019	J	`jnl`	Micro-Net: A unified model for segmentation of various objects in microscopy images. Medical Image Anal. Shan E Ahmed Raza, Linda Cheung, Muhammad Shaban, Simon Graham, David B. A. Epstein, Stella Pelengaris, Michael Khan, Nasir M. Rajpoot
2018	—	`conf`	A Multi-resolution Deep Learning Framework for Lung Adenocarcinoma Growth Pattern Classification. MIUA Najah Alsubaie, Muhammad Shaban, David R. J. Snead, Syed Ali Khurram, Nasir M. Rajpoot
2018	—	`conf`	Classification of lung cancer histology images using patch-level summary statistics. Digital Pathology Simon Graham, Muhammad Shaban, Talha Qaiser, Syed Ali Khurram, Nasir M. Rajpoot
2018	—	`conf`	Context-Aware Learning Using Transferable Features for Classification of Breast Cancer Histology Images. ICIAR Ruqayya Awan, Navid Alemi Koohbanani, Muhammad Shaban, Anna Lisowska, Nasir M. Rajpoot
2018	J	`jnl`	Context-Aware Learning using Transferable Features for Classification of Breast Cancer Histology Images. CoRR Ruqayya Awan, Navid Alemi Koohbanani, Muhammad Shaban, Anna Lisowska, Nasir M. Rajpoot
2018	J	`jnl`	Methods for Segmentation and Classification of Digital Microscopy Tissue Images. CoRR Quoc Dang Vu, Simon Graham, Minh Nguyen Nhat To, Muhammad Shaban, Talha Qaiser, Navid Alemi Koohbanani, Syed Ali Khurram, Tahsin M. Kurç, Keyvan Farahani, Tianhao Zhao, Rajarsi R. Gupta, Jin Tae Kwak, Nasir M. Rajpoot, Joel H. Saltz
2018	J	`jnl`	Micro-Net: A unified model for segmentation of various objects in microscopy images. CoRR Shan-E-Ahmed Raza, Linda Cheung, Muhammad Shaban, Simon Graham, David B. A. Epstein, Stella Pelengaris, Michael Khan, Nasir M. Rajpoot
2018	—	`conf`	Significance of Hyperparameter Optimization for Metastasis Detection in Breast Histology Images. COMPAY/OMIA@MICCAI Navid Alemi Koohbanani, Talha Qaiser, Muhammad Shaban, Jevgenij Gamper, Nasir M. Rajpoot
2018	—	`conf`	Uncertainty Driven Pooling Network for Microvessel Segmentation in Routine Histology Images. COMPAY/OMIA@MICCAI M. M. Fraz, Muhammad Shaban, Simon Graham, Syed Ali Khurram, Nasir M. Rajpoot
2017	J	`jnl`	Representation-Aggregation Networks for Segmentation of Multi-Gigapixel Histology Images. CoRR Abhinav Agarwalla, Muhammad Shaban, Nasir M. Rajpoot