Muhammad Arif

16 papers Journal 14Unranked 2
YearRankTypeTitle / Venue / Authors
2026 J jnl
DeepDBPI: DNA-Binding Protein Identifier Using a Deep Learning Model with Transformed Denoised Features.
J. Chem. Inf. Model.
Kamran Arshad, Muhammad Arif, Dong-Jun Yu
2025 J jnl
An artificial intelligence-based approach for identifying the proteins regulating liquid-liquid phase separation.
Briefings Bioinform.
Zahoor Ahmed, Kiran Shahzadi, Rui Li, Yu-Qing Jiang, Yan-Ting Jin, Muhammad Arif, Juan Feng
2025 J jnl
KEM-IoMT: Knowledge graph embedding-enhanced accurate medical service recommendation against diabetes.
Comput. Biol. Medicine
Nasrullah Khan, Muhammad Rafiq Mufti, Muhammad Arif, Amjad Ali, Zubair Shah
2025 J jnl
PCBert-Kla: an efficient prediction method for lysine lactylation sites based on ProtBert and fusion of physicochemical features.
Briefings Bioinform.
Hong-Qi Zhang, Yi-Xuan Qi, Huma Fida, Hao-Jiang Zhang, Muhammad Arif, Pei-Yu Zhao, Tanvir Alam, Ye-Chen Qi, Xiao-Long Yu, Ke-Jun Deng
2024 J jnl
DPI_CDF: druggable protein identifier using cascade deep forest.
BMC Bioinform.
Muhammad Arif, Ge Fang, Ali Ghulam, Saleh Musleh, Tanvir Alam
2024 — conf
Differential Methylation Analysis in Normal Breast Tissue Contralateral to Tumour Reveals PROM1 As a Potential Prognostic Biomarker.
ICMHI
Aya Nour, Rafaa Alalwani, Sara Alresheq, Muhammad Arif, Tanvir Alam
2024 — conf
In Silico Analysis of Pathogenic Missense Mutation in GBA protein for Gaucher Disease.
ICMHI
Hend Ghassan Eldous, Maryiam Jama Ali Osman, Syed Abdullah Basit, Muhammad Arif, Tanvir Alam
2023 J jnl
Augmented Reality and its Applications in Education: A Systematic Survey.
IEEE Access
Fatima Zulfiqar, Rehan Raza, Muhammad Owais Khan, Muhammad Arif, Atif Alvi, Tanvir Alam
2023 J jnl
Improving DNA-Binding Protein Prediction Using Three-Part Sequence-Order Feature Extraction and a Deep Neural Network Algorithm.
J. Chem. Inf. Model.
Jun Hu, Wenwu Zeng, Ning-Xin Jia, Muhammad Arif, Dong-Jun Yu, Gui-Jun Zhang
2023 J jnl
Lung-EffNet: Lung cancer classification using EfficientNet from CT-scan images.
Eng. Appl. Artif. Intell.
Rehan Raza, Fatima Zulfiqar, Muhammad Owais Khan, Muhammad Arif, Atif Alvi, Muhammad Aksam Iftikhar, Tanvir Alam
2023 J jnl
MMPatho: Leveraging Multilevel Consensus and Evolutionary Information for Enhanced Missense Mutation Pathogenic Prediction.
J. Chem. Inf. Model.
Fang Ge, Muhammad Arif, Zihao Yan, Hanin H. Alahmadi, Apilak Worachartcheewan, Dong-Jun Yu, Watshara Shoombuatong
2023 J jnl
VPatho: a deep learning-based two-stage approach for accurate prediction of gain-of-function and loss-of-function variants.
Briefings Bioinform.
Fang Ge, Chen Li, Shahid Iqbal, Muhammad Arif, Fuyi Li, Maha A. Thafar, Zihao Yan, Apilak Worachartcheewan, Xiaofeng Xu, Jiangning Song, Dong-Jun Yu
2022 J jnl
DeepCPPred: A Deep Learning Framework for the Discrimination of Cell-Penetrating Peptides and Their Uptake Efficiencies.
IEEE ACM Trans. Comput. Biol. Bioinform.
Muhammad Arif, Muhammad Kabir, Saeed Ahmed, Abid Khan, Fang Ge, Adel Khelifi, Dong-Jun Yu
2022 J jnl
Prediction of disease-associated nsSNPs by integrating multi-scale ResNet models with deep feature fusion.
Briefings Bioinform.
Fang Ge, Ying Zhang, Jian Xu, Muhammad Arif, Jiangning Song, Dong-Jun Yu
2020 J jnl
TargetCPP: accurate prediction of cell-penetrating peptides from optimized multi-scale features using gradient boost decision tree.
J. Comput. Aided Mol. Des.
Muhammad Arif, Saeed Ahmad, Farman Ali, Ge Fang, Min Li, Dong-Jun Yu
2018 J jnl
Improving secretory proteins prediction in Mycobacterium tuberculosis using the unbiased dipeptide composition with support vector machine.
Int. J. Data Min. Bioinform.
Saeed Ahmed, Muhammad Kabir, Muhammad Arif, Zakir Ali, Farman Ali, Zar Nawab Khan Swati