Motonori Ota

16 papers Journal 14Unranked 2
YearRankTypeTitle / Venue / Authors
2024 — conf
A semantic design for the biological processes associated with intrinsically disordered proteins.
SWAT4HCLS
Atsuko Yamaguchi, Yumiko Kado, Shigetaka Sakamoto, Satoshi Fukuchi, Motonori Ota
2019 — conf
Semantic Integration of Intrinsically Disordered Proteins and Existing DBs.
SWAT4HCLS
Atsuko Yamaguchi, Hideki Hatanaka, Satoshi Fukuchi, Motonori Ota
2018 J jnl
MICAN-SQ: a sequential protein structure alignment program that is applicable to monomers and all types of oligomers.
Bioinform.
Shintaro Minami, Kengo Sawada, Motonori Ota, George Chikenji
2018 J jnl
Workshop on Patient Similitude: Combining Histopathological Images & Multiple-Scale Molecular Phenotypes (NII Shonan Meeting 2018-17).
NII Shonan Meet. Rep.
Raghu Machiraju, Jens Rittscher, Motonori Ota
2016 J jnl
Profile comparison revealed deviation from structural constraint at the positively selected sites.
Biosyst.
Hiroyuki Oda, Motonori Ota, Hiroyuki Toh
2014 J jnl
IDEAL in 2014 illustrates interaction networks composed of intrinsically disordered proteins and their binding partners.
Nucleic Acids Res.
Satoshi Fukuchi, Takayuki Amemiya, Shigetaka Sakamoto, Yukiko Nobe, Kazuo Hosoda, Yumiko Kado, Seiko D. Murakami, Ryotaro Koike, Hidekazu Hiroaki, Motonori Ota
2012 J jnl
IDEAL: Intrinsically Disordered proteins with Extensive Annotations and Literature.
Nucleic Acids Res.
Satoshi Fukuchi, Shigetaka Sakamoto, Yukiko Nobe, Seiko D. Murakami, Takayuki Amemiya, Kazuo Hosoda, Ryotaro Koike, Hidekazu Hiroaki, Motonori Ota
2012 J jnl
PSCDB: a database for protein structural change upon ligand binding.
Nucleic Acids Res.
Takayuki Amemiya, Ryotaro Koike, Akinori Kidera, Motonori Ota
2012 J jnl
SCPC: a method to structurally compare protein complexes.
Bioinform.
Ryotaro Koike, Motonori Ota
2011 J jnl
SAHG, a comprehensive database of predicted structures of all human proteins.
Nucleic Acids Res.
Chie Motono, Junichi Nakata, Ryotaro Koike, Kana Shimizu, Matsuyuki Shirota, Takayuki Amemiya, Kentaro Tomii, Nozomi Nagano, Naofumi Sakaya, Kiyotaka Misoo, Miwa Sato, Akinori Kidera, Hidekazu Hiroaki, Tsuyoshi Shirai, Kengo Kinoshita, Tamotsu Noguchi, Motonori Ota
2009 J jnl
An evaluation of minimal cellular functions to sustain a bacterial cell.
BMC Syst. Biol.
Yusuke Azuma, Motonori Ota
2008 J jnl
An enhanced partial order curve comparison algorithm and its application to analyzing protein folding trajectories.
BMC Bioinform.
Hong Sun, Hakan Ferhatosmanoglu, Motonori Ota, Yusu Wang
2005 J jnl
P-cats: prediction of catalytic residues in proteins from their tertiary structures.
Bioinform.
Kengo Kinoshita, Motonori Ota
2002 J jnl
GTOP: a database of protein structures predicted from genome sequences.
Nucleic Acids Res.
Takeshi Kawabata, Satoshi Fukuchi, Keiichi Homma, Motonori Ota, Jiro Araki, Takehiko Ito, Nobuyuki Ichiyoshi, Ken Nishikawa
2000 J jnl
DNA Data Bank of Japan (DDBJ) in collaboration with mass sequencing teams.
Nucleic Acids Res.
Yoshio Tateno, Satoru Miyazaki, Motonori Ota, Hideaki Sugawara, Takashi Gojobori
1999 J jnl
The Protein Mutant Database.
Nucleic Acids Res.
Takeshi Kawabata, Motonori Ota, Ken Nishikawa