Mostafa Herajy

20 papers B 2Misc 1Journal 11Unranked 4
YearRankTypeTitle / Venue / Authors
2025 J jnl
A workflow for the hybrid modelling and simulation of multi-timescale biological systems.
Biosyst.
Mostafa Herajy, Fei Liu, Monika Heiner
2025 J jnl
Addressing data uncertainty of Caulobacter crescentus cell cycles using hybrid Petri nets with fuzzy kinetics.
Comput. Biol. Medicine
George Assaf, Fei Liu, Monika Heiner, Mostafa Herajy
2025 J jnl
Energy and QoS-aware virtual machine placement approach for IaaS cloud datacenter.
Neural Comput. Appl.
E. I. Elsedimy, Mostafa Herajy, Sara M. M. Abo Hashish
2024 J jnl
DCNN: a novel binary and multi-class network intrusion detection model via deep convolutional neural network.
EURASIP J. Inf. Secur.
Ahmed Shebl, E. I. Elsedimy, Amr Ismail, A. A. Salama, Mostafa Herajy
2024 J jnl
Design patterns for the construction of computational biological models.
Briefings Bioinform.
Mostafa Herajy, Fei Liu, Monika Heiner
2023 J jnl
Formal verification confirms the role of p53 protein in cell fate decision mechanism.
Theory Biosci.
Eman Abdelaziz Mahmoud, Mostafa Herajy, Ibrahim E. Ziedan, Hazem I. Shehata
2019 — ch.
A Graphical Approach for Hybrid Modelling of Intracellular Calcium Dynamics Based on Coloured Hybrid Petri Nets.
Automated Reasoning for Systems Biology and Medicine
Amr Ismail, Mostafa Herajy, Monika Heiner
2018 J jnl
Adaptive and Bio-semantics of Continuous Petri Nets: Choosing the Appropriate Interpretation.
Fundam. Informaticae
Mostafa Herajy, Monika Heiner
2018 Misc conf
An Improved simulation of Hybrid biological Models with Many stochastic Events and quasi-Disjoint Subnets.
WSC
Mostafa Herajy, Monika Heiner
2018 J jnl
Coloured Hybrid Petri Nets: An adaptable modelling approach for multi-scale biological networks.
Comput. Biol. Chem.
Mostafa Herajy, Fei Liu, Christian Rohr, Monika Heiner
2017 J jnl
Snoopy's hybrid simulator: a tool to construct and simulate hybrid biological models.
BMC Syst. Biol.
Mostafa Herajy, Fei Liu, Christian Rohr, Monika Heiner
2016 — conf
Accelerated Simulation of Hybrid Biological Models with Quasi-Disjoint Deterministic and Stochastic Subnets.
HSB
Mostafa Herajy, Monika Heiner
2014 B conf
A Steering Server for Collaborative Simulation of Quantitative Petri Nets.
Petri Nets
Mostafa Herajy, Monika Heiner
2014 — conf
Coloured hybrid Petri nets for systems biology.
BioPPN@Petri Nets
Mostafa Herajy, Fei Liu, Christian Rohr
2014 J jnl
Petri Net-Based Collaborative Simulation and Steering of Biochemical Reaction Networks.
Fundam. Informaticae
Mostafa Herajy, Monika Heiner
2013 — —
Computational steering of multi-scale biochemical networks.
Mostafa Herajy
2013 J jnl
Hybrid Petri Nets for Modelling the Eukaryotic Cell Cycle.
Trans. Petri Nets Other Model. Concurr.
Mostafa Herajy, Martin Schwarick, Monika Heiner
2012 B conf
Snoopy - A Unifying Petri Net Tool.
Petri Nets
Monika Heiner, Mostafa Herajy, Fei Liu, Christian Rohr, Martin Schwarick
2012 — conf
Towards a Computational Steering and Petri Nets Framework for the Modelling of Biochemical Reaction Networks.
CS&P
Mostafa Herajy, Monika Heiner
2010 — conf
Hybrid Petri Nets for Modelling of Hybrid Biochemical Interactions.
AWPN
Mostafa Herajy, Monika Heiner