Mohieddin Jafari

13 papers Journal 13
YearRankTypeTitle / Venue / Authors
2022 J jnl
The ENDS of assumptions: an online tool for the epistemic non-parametric drug-response scoring.
Bioinform.
Ali Amiryousefi, Bernardo Williams, Mohieddin Jafari, Jing Tang
2021 J jnl
IrGO: Iranian traditional medicine General Ontology and knowledge base.
J. Biomed. Semant.
Ayeh Naghizadeh, Mahdi Salamat, Donya Hamzeian, Shaghayegh Akbari, Hossein Rezaeizadeh, Mahdi Alizadeh Vaghasloo, Reza Karbalaei, Mehdi Mirzaie, Mehrdad Karimi, Mohieddin Jafari
2021 J jnl
Network-based modeling of herb combinations in traditional Chinese medicine.
Briefings Bioinform.
Yinyin Wang, Hongbin Yang, Linxiao Chen, Mohieddin Jafari, Jing Tang
2019 J jnl
CINNA: an R/CRAN package to decipher Central Informative Nodes in Network Analysis.
Bioinform.
Minoo Ashtiani, Mehdi Mirzaie, Mohieddin Jafari
2019 J jnl
DrugComb: an integrative cancer drug combination data portal.
Nucleic Acids Res.
Bulat Zagidullin, Jehad Aldahdooh, Shuyu Zheng, Wenyu Wang, Yinyin Wang, Joseph Saad, Alina Malyutina, Mohieddin Jafari, ZiaurRehman Tanoli, Alberto Pessia, Jing Tang
2019 J jnl
IMMAN: an R/Bioconductor package for Interolog protein network reconstruction, mapping and mining analysis.
BMC Bioinform.
Minoo Ashtiani, Payman Nickchi, Soheil Jahangiri-Tazehkand, Abdollah Safari, Mehdi Mirzaie, Mohieddin Jafari
2019 J jnl
Integrated use of bioinformatic resources reveals that co-targeting of histone deacetylases, IKBK and SRC inhibits epithelial-mesenchymal transition in cancer.
Briefings Bioinform.
Farnaz Barneh, Mehdi Mirzaie, Payman Nickchi, Tuan Zea Tan, Jean-Paul Thiery, Mehran Piran, Mona Salimi, Fatemeh Goshadrou, Amir R. Aref, Mohieddin Jafari
2019 J jnl
Predicting Meridian in Chinese traditional medicine using machine learning approaches.
PLoS Comput. Biol.
Yinyin Wang, Mohieddin Jafari, Yun Tang, Jing Tang
2018 J jnl
A systematic survey of centrality measures for protein-protein interaction networks.
BMC Syst. Biol.
Minoo Ashtiani, Ali Salehzadeh-Yazdi, Zahra Razaghi-Moghadam, Holger Hennig, Olaf Wolkenhauer, Mehdi Mirzaie, Mohieddin Jafari
2018 J jnl
Network Centrality Analysis of Tehran Urban and Suburban Railway System.
CoRR
Mohieddin Jafari, Sayed Mohammad Fakhar
2016 J jnl
Updates on drug-target network; facilitating polypharmacology and data integration by growth of DrugBank database.
Briefings Bioinform.
Farnaz Barneh, Mohieddin Jafari, Mehdi Mirzaie
2015 J jnl
Interlog protein network: an evolutionary benchmark of protein interaction networks for the evaluation of clustering algorithms.
BMC Bioinform.
Mohieddin Jafari, Mehdi Mirzaie, Mehdi Sadeghi
2015 J jnl
PEIMAN 1.0: Post-translational modification Enrichment, Integration and Matching ANalysis.
Database J. Biol. Databases Curation
Payman Nickchi, Mohieddin Jafari, Shiva Kalantari