Mohammed J. Zaki

159 papers A* 24A 4B 5C 2Misc 3Journal 79Unranked 31
YearRankTypeTitle / Venue / Authors
2026 J jnl
Decoder-based Sense Knowledge Distillation.
CoRR
Qitong Wang, Mohammed J. Zaki, Georgios Kollias, Vasileios Kalantzis
2026 J jnl
Deep Clustering with Associative Memories.
CoRR
Bishwajit Saha, Dmitry Krotov, Mohammed J. Zaki, Parikshit Ram
2025 — conf
24
KDD (2)
Da Yan, Truong-Son Hy, Jake Y. Chen, Mohammed J. Zaki
2025 — conf
KERL: Knowledge-Enhanced Personalized Recipe Recommendation using Large Language Models.
ACL (1)
Fnu Mohbat, Mohammed J. Zaki
2025 J jnl
KERL: Knowledge-Enhanced Personalized Recipe Recommendation using Large Language Models.
CoRR
Fnu Mohbat, Mohammed J. Zaki
2025 J jnl
Memorization to Generalization: Emergence of Diffusion Models from Associative Memory.
CoRR
Bao Pham, Gabriel Raya, Matteo Negri, Mohammed J. Zaki, Luca Ambrogioni, Dmitry Krotov
2025 — conf
Multi-Sense Embeddings for Language Models and Knowledge Distillation.
ACL (Findings)
Qitong Wang, Mohammed J. Zaki, Georgios Kollias, Vasileios Kalantzis
2025 J jnl
Multi-Sense Embeddings for Language Models and Knowledge Distillation.
CoRR
Qitong Wang, Mohammed J. Zaki, Georgios Kollias, Vasileios Kalantzis
2025 A* conf
Replacing Paths with Connection-Biased Attention for Knowledge Graph Completion.
AAAI
Sharmishtha Dutta, Alex Gittens, Mohammed J. Zaki, Charu C. Aggarwal
2024 A* conf
23
KDD
Da Yan, Ahmed Abdeen Hamed, Jake Y. Chen, Mohammed J. Zaki
2024 J jnl
Directed Graph Transformers.
Trans. Mach. Learn. Res.
Qitong Wang, Georgios Kollias, Vasileios Kalantzis, Naoki Abe, Mohammed J. Zaki
2024 J jnl
FETILDA: Evaluation Framework for Effective Representations of Long Financial Documents.
ACM Trans. Knowl. Discov. Data
Bolun (Namir) Xia, Vipula Rawte, Aparna Gupta, Mohammed J. Zaki
2024 J jnl
FLAG: Financial Long Document Classification via AMR-based GNN.
CoRR
Bolun (Namir) Xia, Aparna Gupta, Mohammed J. Zaki
2024 J jnl
GraphFlow+: Exploiting Conversation Flow in Conversational Machine Comprehension with Graph Neural Networks.
Mach. Intell. Res.
Jing Hu, Lingfei Wu, Yu Chen, Po Hu, Mohammed J. Zaki
2024 A conf
LLaVA-Chef: A Multi-modal Generative Model for Food Recipes.
CIKM
Fnu Mohbat, Mohammed J. Zaki
2024 J jnl
LLaVA-Chef: A Multi-modal Generative Model for Food Recipes.
CoRR
Fnu Mohbat, Mohammed J. Zaki
2024 J jnl
Neural Models for Generating Natural Language Summaries from Temporal Personal Health Data.
J. Heal. Informatics Res.
Jonathan J. Harris, Mohammed J. Zaki
2024 J jnl
Replacing Paths with Connection-Biased Attention for Knowledge Graph Completion.
CoRR
Sharmishtha Dutta, Alex Gittens, Mohammed J. Zaki, Charu C. Aggarwal
2024 — conf
Semantic Graph Learning for Trend Prediction from Long Financial Documents.
CIFEr
Bolun Namir Xia, Aparna Gupta, Mohammed J. Zaki
2024 J jnl
Toward Subgraph-Guided Knowledge Graph Question Generation With Graph Neural Networks.
IEEE Trans. Neural Networks Learn. Syst.
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2024 A* conf
Triplet Interaction Improves Graph Transformers: Accurate Molecular Graph Learning with Triplet Graph Transformers.
ICML
Md. Shamim Hussain, Mohammed J. Zaki, Dharmashankar Subramanian
2024 J jnl
Triplet Interaction Improves Graph Transformers: Accurate Molecular Graph Learning with Triplet Graph Transformers.
CoRR
Md. Shamim Hussain, Mohammed J. Zaki, Dharmashankar Subramanian
2023 A* conf
22nd International Workshop on Data Mining in Bioinformatics (BIOKDD 2023).
KDD
Da Yan, Ariful Azad, Jie Hou, Jake Y. Chen, Mohammed J. Zaki
2023 A* conf
End-to-end Differentiable Clustering with Associative Memories.
ICML
Bishwajit Saha, Dmitry Krotov, Mohammed J. Zaki, Parikshit Ram
2023 J jnl
End-to-end Differentiable Clustering with Associative Memories.
CoRR
Bishwajit Saha, Dmitry Krotov, Mohammed J. Zaki, Parikshit Ram
2023 A* conf
Energy Transformer.
NeurIPS
Benjamin Hoover, Yuchen Liang, Bao Pham, Rameswar Panda, Hendrik Strobelt, Duen Horng Chau, Mohammed J. Zaki, Dmitry Krotov
2023 J jnl
Energy Transformer.
CoRR
Benjamin Hoover, Yuchen Liang, Bao Pham, Rameswar Panda, Hendrik Strobelt, Duen Horng Chau, Mohammed J. Zaki, Dmitry Krotov
2023 — conf
GVdoc - Graph-based Visual DOcument Classification.
ACL (Findings)
Fnu Mohbat, Mohammed J. Zaki, Catherine Finegan-Dollak, Ashish Verma
2023 J jnl
GVdoc: Graph-based Visual Document Classification.
CoRR
Fnu Mohbat, Mohammed J. Zaki, Catherine Finegan-Dollak, Ashish Verma
2023 J jnl
Health-guided recipe recommendation over knowledge graphs.
J. Web Semant.
Diya Li, Mohammed J. Zaki, Ching-Hua Chen
2023 A* conf
The Information Pathways Hypothesis: Transformers are Dynamic Self-Ensembles.
KDD
Md. Shamim Hussain, Mohammed J. Zaki, Dharmashankar Subramanian
2023 J jnl
The Information Pathways Hypothesis: Transformers are Dynamic Self-Ensembles.
CoRR
Md. Shamim Hussain, Mohammed J. Zaki, Dharmashankar Subramanian
2022 A* conf
21th International Workshop on Data Mining in Bioinformatics (BIOKDD 2022).
KDD
Da Yan, Catia Pesquita, Carsten Görg, Jake Y. Chen, Mohammed J. Zaki
2022 J jnl
Associative Learning for Network Embedding.
CoRR
Yuchen Liang, Dmitry Krotov, Mohammed J. Zaki
2022 J jnl
Domain-Specific Keyword Extraction Using Joint Modeling of Local and Global Contextual Semantics.
ACM Trans. Knowl. Discov. Data
Muhammad Abulaish, Mohd Fazil, Mohammed J. Zaki
2022 J jnl
FETILDA: An Effective Framework For Fin-tuned Embeddings For Long Financial Text Documents.
CoRR
Bolun (Namir) Xia, Vipula D. Rawte, Mohammed J. Zaki, Aparna Gupta
2022 — conf
Food Knowledge Representation Learning with Adversarial Substitution.
AACL/IJCNLP (1)
Diya Li, Mohammed J. Zaki
2022 A* conf
Global Self-Attention as a Replacement for Graph Convolution.
KDD
Md. Shamim Hussain, Mohammed J. Zaki, Dharmashankar Subramanian
2022 B conf
HG2Vec: Improved Word Embeddings from Dictionary and Thesaurus Based Heterogeneous Graph.
COLING
Qitong Wang, Mohammed J. Zaki
2022 J jnl
Modern Hopfield Networks for graph embedding.
Frontiers Big Data
Yuchen Liang, Dmitry Krotov, Mohammed J. Zaki
2022 B conf
TINKER: A framework for Open source Cyberthreat Intelligence.
TrustCom
Nidhi Rastogi, Sharmishtha Dutta, Alex Gittens, Mohammed J. Zaki, Charu C. Aggarwal
2022 J jnl
Towards Neural Numeric-To-Text Generation From Temporal Personal Health Data.
CoRR
Jonathan J. Harris, Mohammed J. Zaki
2021 A* conf
20th International Workshop on Data Mining in Bioinformatics (BIOKDD 2021).
KDD
Da Yan, Steve Qin, Debswapna Bhattacharya, Jake Y. Chen, Mohammed J. Zaki
2021 J jnl
A Framework for Generating Summaries from Temporal Personal Health Data.
ACM Trans. Comput. Heal.
Jonathan J. Harris, Ching-Hua Chen, Mohammed J. Zaki
2021 J jnl
An Efficient Heartbeats Classifier Based on Optimizing Convolutional Neural Network Model.
IEEE Access
Eman A. Maghawry, Tarek F. Gharib, Rasha M. Ismail, Mohammed J. Zaki
2021 A* conf
Can a Fruit Fly Learn Word Embeddings?
ICLR
Yuchen Liang, Chaitanya K. Ryali, Benjamin Hoover, Leopold Grinberg, Saket Navlakha, Mohammed J. Zaki, Dmitry Krotov
2021 J jnl
Can a Fruit Fly Learn Word Embeddings?
CoRR
Yuchen Liang, Chaitanya K. Ryali, Benjamin Hoover, Leopold Grinberg, Saket Navlakha, Mohammed J. Zaki, Dmitry Krotov
2021 J jnl
Edge-augmented Graph Transformers: Global Self-attention is Enough for Graphs.
CoRR
Md. Shamim Hussain, Mohammed J. Zaki, Dharmashankar Subramanian
2021 Misc conf
Enhancing Clinical Relevance of Health Behavior Insights via Semantics.
AMIA
Jonathan J. Harris, Deborah L. McGuinness, Marco Monti, Oshani Seneviratne, Mohammed J. Zaki, Ching-Hua Chen
2021 J jnl
Keyphrase Extraction Using Neighborhood Knowledge Based on Word Embeddings.
CoRR
Yuchen Liang, Mohammed J. Zaki
2021 — conf
Nutrition Guided Recipe Search via Pre-trained Recipe Embeddings.
ICDE Workshops
Diya Li, Mohammed J. Zaki, Ching-Hua Chen
2021 A conf
Personalized Food Recommendation as Constrained Question Answering over a Large-scale Food Knowledge Graph.
WSDM
Yu Chen, Ananya Subburathinam, Ching-Hua Chen, Mohammed J. Zaki
2021 J jnl
Personalized Food Recommendation as Constrained Question Answering over a Large-scale Food Knowledge Graph.
CoRR
Yu Chen, Ananya Subburathinam, Ching-Hua Chen, Mohammed J. Zaki
2021 J jnl
TINKER: A framework for Open source Cyberthreat Intelligence.
CoRR
Nidhi Rastogi, Sharmishtha Dutta, Mohammed J. Zaki, Alex Gittens, Charu C. Aggarwal
2020 — conf
A Comparative Analysis of Temporal Long Text Similarity: Application to Financial Documents.
MIDAS@PKDD/ECML
Vipula Rawte, Aparna Gupta, Mohammed J. Zaki
2020 J jnl
A Framework for Generating Explanations from Temporal Personal Health Data.
CoRR
Jonathan J. Harris, Ching-Hua Chen, Mohammed J. Zaki
2020 J jnl
A Survey of Figurative Language and Its Computational Detection in Online Social Networks.
ACM Trans. Web
Muhammad Abulaish, Ashraf Kamal, Mohammed J. Zaki
2020 Misc conf
Combining User Preferences and Health Needs in Personalized Food Recommendation.
AMIA
Yu Chen, Ching-Hua Chen, Mohammed J. Zaki
2020 A* conf
GraphFlow: Exploiting Conversation Flow with Graph Neural Networks for Conversational Machine Comprehension.
IJCAI
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2020 A* conf
Iterative Deep Graph Learning for Graph Neural Networks: Better and Robust Node Embeddings.
NeurIPS
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2020 J jnl
Iterative Deep Graph Learning for Graph Neural Networks: Better and Robust Node Embeddings.
CoRR
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2020 J jnl
MALOnt: An Ontology for Malware Threat Intelligence.
CoRR
Nidhi Rastogi, Sharmishtha Dutta, Mohammed J. Zaki, Alex Gittens, Charu C. Aggarwal
2020 J jnl
Personal Health Knowledge Graphs for Patients.
CoRR
Nidhi Rastogi, Mohammed J. Zaki
2020 A* conf
RECIPTOR: An Effective Pretrained Model for Recipe Representation Learning.
KDD
Diya Li, Mohammed J. Zaki
2020 A* conf
Reinforcement Learning Based Graph-to-Sequence Model for Natural Question Generation.
ICLR
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2020 J jnl
Toward Subgraph Guided Knowledge Graph Question Generation with Graph Neural Networks.
CoRR
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2019 C conf
A Framework for Benchmarking Discrimination-Aware Models in Machine Learning.
AIES
Rodrigo L. Cardoso, Wagner Meira Jr., Virgílio A. F. Almeida, Mohammed J. Zaki
2019 — conf
Bidirectional Attentive Memory Networks for Question Answering over Knowledge Bases.
NAACL-HLT (1)
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2019 J jnl
Bidirectional Attentive Memory Networks for Question Answering over Knowledge Bases.
CoRR
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2019 J jnl
Deep Iterative and Adaptive Learning for Graph Neural Networks.
CoRR
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2019 — conf
FoodKG Enabled Q&A Application.
ISWC (Satellites)
Steven Haussmann, Yu Chen, Oshani Seneviratne, Nidhi Rastogi, James V. Codella, Ching-Hua Chen, Deborah L. McGuinness, Mohammed J. Zaki
2019 — conf
FoodKG: A Semantics-Driven Knowledge Graph for Food Recommendation.
ISWC (2)
Steven Haussmann, Oshani Seneviratne, Yu Chen, Yarden Ne'eman, James V. Codella, Ching-Hua Chen, Deborah L. McGuinness, Mohammed J. Zaki
2019 J jnl
GraphFlow: Exploiting Conversation Flow with Graph Neural Networks for Conversational Machine Comprehension.
CoRR
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2019 J jnl
Natural Question Generation with Reinforcement Learning Based Graph-to-Sequence Model.
CoRR
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2019 J jnl
Reinforcement Learning Based Graph-to-Sequence Model for Natural Question Generation.
CoRR
Yu Chen, Lingfei Wu, Mohammed J. Zaki
2018 — conf
Analysis of year-over-year changes in Risk Factors Disclosure in 10-K filings.
DSMM@SIGMOD
Vipula Rawte, Aparna Gupta, Mohammed J. Zaki
2018 — ch.
Closed Itemset Mining and Nonredundant Association Rule Mining.
Encyclopedia of Database Systems (2nd ed.)
Mohammed J. Zaki
2018 — conf
Embeddings for the Identification of Aircraft Faults (MERIT).
ICPHM
Mohamed Elshrif, Stefano Giovanni Rizzo, Franz D. Betz, Dragos D. Margineantu, Mohammed J. Zaki, Saniav Chawla
2018 — conf
Financial Entity Identification and Information Integration (FEIII) 2018 Challenge: The Report of the Organizing Committee.
DSMM@SIGMOD
Louiqa Raschid, Douglas Burdick, John Grant, Joe Langsam, Jay Pujara, Elizabeth Roman, Ian Soboroff, Mohammed J. Zaki, Elena Zotkina
2018 J jnl
Multiscale and Multimodal Analysis for Computational Biology.
IEEE ACM Trans. Comput. Biol. Bioinform.
Xin Gao, Jake Y. Chen, Mohammed J. Zaki
2018 A ed.
Proceedings of the 27th ACM International Conference on Information and Knowledge Management, CIKM 2018, Torino, Italy, October 22-26, 2018
CIKM
Alfredo Cuzzocrea, James Allan, Norman W. Paton, Divesh Srivastava, Rakesh Agrawal, Andrei Z. Broder, Mohammed J. Zaki, K. Selçuk Candan, Alexandros Labrinidis, Assaf Schuster, Haixun Wang
2018 — conf
Using supervised learning techniques for entity relationships.
DSMM@SIGMOD
Vipula Rawte, Aparna Gupta, Mohammed J. Zaki
2017 — conf
Comparative text analytics via topic modeling in banking.
SSCI
Yu Chen, Rhaad M. Rabbani, Aparna Gupta, Mohammed J. Zaki
2017 — conf
Graph Data Mining with Arabesque.
SIGMOD Conference
Eslam Hussein, Abdurrahman Ghanem, Vinícius Vitor dos Santos Dias, Carlos H. C. Teixeira, Ghadeer Abuoda, Marco Serafini, Georgos Siganos, Gianmarco De Francisci Morales, Ashraf Aboulnaga, Mohammed J. Zaki
2017 A* conf
KATE: K-Competitive Autoencoder for Text.
KDD
Yu Chen, Mohammed J. Zaki
2017 J jnl
KATE: K-Competitive Autoencoder for Text.
CoRR
Yu Chen, Mohammed J. Zaki
2017 J jnl
Preface: Selected Papers from the Workshop Bioinformatics and Artificial Intelligence Joined with the International Joint Conference on Artificial Intelligence.
J. Comput. Biol.
Abdoulaye Baniré Diallo, Engelbert Mephu Nguifo, Mohammed J. Zaki
2016 — conf
A Query-oriented Approach for Relevance in Citation Networks.
WWW (Companion Volume)
Luam C. Totti, Prasenjit Mitra, Mourad Ouzzani, Mohammed J. Zaki
2016 J jnl
A distributed approach for graph mining in massive networks.
Data Min. Knowl. Discov.
Nilothpal Talukder, Mohammed J. Zaki
2016 — conf
Investigating bank failures using text mining.
SSCI
Aparna Gupta, Majeed Simaan, Mohammed J. Zaki
2016 — conf
Parallel graph mining with dynamic load balancing.
IEEE BigData
Nilothpal Talukder, Mohammed J. Zaki
2016 — ed.
Proceedings of the Workshop on Advances in Bioinformatics and Artificial Intelligence: Bridging the Gap co-located with 25th International Joint Conference on Artificial Intelligence (IJCAI 2016), New-York, USA, July 11, 2016.
BAI@IJCAI
Abdoulaye Baniré Diallo, Engelbert Mephu Nguifo, Mohammed J. Zaki
2016 — conf
Rheem: Enabling Multi-Platform Task Execution.
SIGMOD Conference
Divy Agrawal, Mouhamadou Lamine Ba, Laure Berti-Équille, Sanjay Chawla, Ahmed K. Elmagarmid, Hossam Hammady, Yasser Idris, Zoi Kaoudi, Zuhair Khayyat, Sebastian Kruse, Mourad Ouzzani, Paolo Papotti, Jorge-Arnulfo Quiané-Ruiz, Nan Tang, Mohammed J. Zaki
2016 B conf
Road to Freedom in Big Data Analytics.
EDBT
Divy Agrawal, Sanjay Chawla, Ahmed K. Elmagarmid, Zoi Kaoudi, Mourad Ouzzani, Paolo Papotti, Jorge-Arnulfo Quiané-Ruiz, Nan Tang, Mohammed J. Zaki
2016 J jnl
Sampling frequent and minimal boolean patterns: theory and application in classification.
Data Min. Knowl. Discov.
Geng Li, Mohammed J. Zaki
2015 J jnl
Arabesque: A System for Distributed Graph Mining - Extended version.
CoRR
Carlos H. C. Teixeira, Alexandre J. Fonseca, Marco Serafini, Georgos Siganos, Mohammed J. Zaki, Ashraf Aboulnaga
2015 A* conf
Arabesque: a system for distributed graph mining.
SOSP
Carlos H. C. Teixeira, Alexandre J. Fonseca, Marco Serafini, Georgos Siganos, Mohammed J. Zaki, Ashraf Aboulnaga
2015 J jnl
Knowledge Discovery Using Big Data in Biomedical Systems.
IEEE ACM Trans. Comput. Biol. Bioinform.
Sarath Chandra Janga, Dongxiao Zhu, Jake Y. Chen, Mohammed J. Zaki
2015 J jnl
Learning sequential classifiers from long and noisy discrete-event sequences efficiently.
Data Min. Knowl. Discov.
Gessé Dafé, Adriano Veloso, Mohammed J. Zaki, Wagner Meira Jr.
2015 — ed.
Proceedings of the Eighth International C* Conference on Computer Science & Software Engineering, Yokohama, Japan, July 13-15, 2015
C3S2E
Jake Yue Chen, Mohammed J. Zaki, Tamer Kahveci, Saeed Salem, Mehmet Koyutürk
2014 — book
Data Mining and Analysis: Fundamental Concepts and Algorithms.
Mohammed J. Zaki, Wagner Meira Jr.
2014 — conf
Parallel Graph Mining with GPUs.
BigMine
Robert Kessl, Nilothpal Talukder, Pranay Anchuri, Mohammed J. Zaki
2014 B conf
Reachability Queries in Very Large Graphs: A Fast Refined Online Search Approach.
EDBT
Renê Rodrigues Veloso, Loïc Cerf, Wagner Meira Jr., Mohammed J. Zaki
2013 A* conf
Approximate graph mining with label costs.
KDD
Pranay Anchuri, Mohammed J. Zaki, Omer Barkol, Shahar Golan, Moshe Shamy
2013 — ch.
Clustering Biological Data.
Data Clustering: Algorithms and Applications
Chandan K. Reddy, Mohammad Al Hasan, Mohammed J. Zaki
2013 J jnl
DAGGER: A Scalable Index for Reachability Queries in Large Dynamic Graphs
CoRR
Hilmi Yildirim, Vineet Chaoji, Mohammed J. Zaki
2013 — conf
Stochastic subspace search for top-k multi-view clustering.
MultiClust@KDD
Geng Li, Stephan Günnemann, Mohammed J. Zaki
2013 J jnl
Trends in computer science research.
Commun. ACM
Apirak Hoonlor, Boleslaw K. Szymanski, Mohammed J. Zaki
2012 A ed.
21st ACM International Conference on Information and Knowledge Management, CIKM'12, Maui, HI, USA, October 29 - November 02, 2012
CIKM
Xue-wen Chen, Guy Lebanon, Haixun Wang, Mohammed J. Zaki
2012 — ch.
A Journey in Pattern Mining.
Journeys to Data Mining
Mohammed J. Zaki
2012 J jnl
Biological knowledge discovery and data mining.
Sci. Program.
Mohammad Al Hasan, Jun Huan, Jake Yue Chen, Mohammed J. Zaki
2012 J jnl
BitPath -- Label Order Constrained Reachability Queries over Large Graphs
CoRR
Medha Atre, Vineet Chaoji, Mohammed J. Zaki
2012 J jnl
Effective graph classification based on topological and label attributes.
Stat. Anal. Data Min.
Geng Li, Murat Semerci, Bülent Yener, Mohammed J. Zaki
2012 J jnl
GRAIL: a scalable index for reachability queries in very large graphs.
VLDB J.
Hilmi Yildirim, Vineet Chaoji, Mohammed J. Zaki
2012 J jnl
Graph mining for discovering infrastructure patterns in configuration management databases.
Knowl. Inf. Syst.
Pranay Anchuri, Mohammed J. Zaki, Omer Barkol, Ruth Bergman, Yifat Felder, Shahar Golan, Arik Sityon
2012 J jnl
Mining Attribute-structure Correlated Patterns in Large Attributed Graphs
CoRR
Arlei Silva, Wagner Meira Jr., Mohammed J. Zaki
2012 J jnl
Mining Attribute-structure Correlated Patterns in Large Attributed Graphs.
Proc. VLDB Endow.
Arlei Silva, Wagner Meira Jr., Mohammed J. Zaki
2012 — ed.
Proceedings of the 11th International Workshop on Data Mining in Bioinformatics, BIOKDD 2012, Beijing, China, August 12, 2012
BIOKDD
Tamer Kahveci, Saeed Salem, Mehmet Koyutürk, Jake Yue Chen, Mohammed J. Zaki
2012 A* conf
Sampling minimal frequent boolean (DNF) patterns.
KDD
Geng Li, Mohammed J. Zaki
2012 J jnl
Towards a Better Quality Metric for Graph Cluster Evaluation.
J. Inf. Data Manag.
Hélio Marcos Paz de Almeida, Dorgival Olavo Guedes Neto, Wagner Meira Jr., Mohammed J. Zaki
2011 — ch.
A Survey of Link Prediction in Social Networks.
Social Network Data Analytics
Mohammad Al Hasan, Mohammed J. Zaki
2011 A* conf
Infrastructure Pattern Discovery in Configuration Management Databases via Large Sparse Graph Mining.
ICDM
Pranay Anchuri, Mohammed J. Zaki, Omer Barkol, Ruth Bergman, Yifat Felder, Shahar Golan, Arik Sityon
2011 — conf
Is There a Best Quality Metric for Graph Clusters?
ECML/PKDD (1)
Hélio Marcos Paz de Almeida, Dorgival Olavo Guedes Neto, Wagner Meira Jr., Mohammed J. Zaki
2011 — ed.
Proceedings of the Tenth International Workshop on Data Mining in Bioinformatics, BIOKDD '11, San Diego, California, USA, August 21, 2011
BIOKDD
Mohammed J. Zaki, Jake Yue Chen, Mohammad Al Hasan, Jun Huan
2011 J jnl
SimClus: an effective algorithm for clustering with a lower bound on similarity.
Knowl. Inf. Syst.
Mohammad Al Hasan, Saeed Salem, Mohammed J. Zaki
2010 J jnl
FlexSnap: Flexible Non-sequential Protein Structure Alignment.
Algorithms Mol. Biol.
Saeed Salem, Mohammed J. Zaki, Chris Bystroff
2010 — conf
Learning Dissimilarities for Categorical Symbols.
FSDM
Jierui Xie, Boleslaw K. Szymanski, Mohammed J. Zaki
2010 A* conf
Matrix "Bit" loaded: a scalable lightweight join query processor for RDF data.
WWW
Medha Atre, Vineet Chaoji, Mohammed J. Zaki, James A. Hendler
2010 — conf
Mining Complex Boolean Expressions for Sequential Equivalence Checking.
Asian Test Symposium
Neha Goel, Michael S. Hsiao, Naren Ramakrishnan, Mohammed J. Zaki
2010 Misc conf
Practical Graph Mining.
ICCS
Mohammed J. Zaki
2010 J jnl
Prism: An effective approach for frequent sequence mining via prime-block encoding.
J. Comput. Syst. Sci.
Karam Gouda, Mosab Hassaan, Mohammed J. Zaki
2010 — conf
Structural correlation pattern mining for large graphs.
MLG@KDD
Arlei Silva, Wagner Meira Jr., Mohammed J. Zaki
2010 J jnl
VOGUE: A variable order hidden Markov model with duration based on frequent sequence mining.
ACM Trans. Knowl. Discov. Data
Mohammed J. Zaki, Christopher D. Carothers, Boleslaw K. Szymanski
2009 — ch.
Closed Itemset Mining and Non-redundant Association Rule Mining.
Encyclopedia of Database Systems
Mohammed J. Zaki
2009 B conf
Clustering with Lower Bound on Similarity.
PAKDD
Mohammad Al Hasan, Saeed Salem, Benjarath Pupacdi, Mohammed J. Zaki
2009 C conf
FlexSnap: Flexible Non-sequential Protein Structure Alignment.
WABI
Saeed Salem, Mohammed J. Zaki, Chris Bystroff
2009 J jnl
Iterative Non-Sequential protein Structural Alignment.
J. Bioinform. Comput. Biol.
Saeed Salem, Mohammed J. Zaki, Christopher Bystroff
2009 J jnl
Novel tools to streamline the conference review process: experiences from SIGKDD'09.
SIGKDD Explor.
Peter A. Flach, Sebastian Spiegler, Bruno Golénia, Simon Price, John Guiver, Ralf Herbrich, Thore Graepel, Mohammed J. Zaki
2009 J jnl
Output Space Sampling for Graph Patterns.
Proc. VLDB Endow.
Mohammad Al Hasan, Mohammed J. Zaki
2009 J jnl
Robust partitional clustering by outlier and density insensitive seeding.
Pattern Recognit. Lett.
Mohammad Al Hasan, Vineet Chaoji, Saeed Salem, Mohammed J. Zaki
2009 J jnl
SPARCL: an effective and efficient algorithm for mining arbitrary shape-based clusters.
Knowl. Inf. Syst.
Vineet Chaoji, Mohammad Al Hasan, Saeed Salem, Mohammed J. Zaki
2008 J jnl
Introduction to special issue on bioinformatics.
ACM Trans. Knowl. Discov. Data
Mohammed J. Zaki, George Karypis, Jiong Yang, Wei Wang
2008 J jnl
ORIGAMI: A Novel and Effective Approach for Mining Representative Orthogonal Graph Patterns.
Stat. Anal. Data Min.
Vineet Chaoji, Mohammad Al Hasan, Saeed Salem, Jérémy Besson, Mohammed J. Zaki
2008 A* conf
SPARCL: Efficient and Effective Shape-Based Clustering.
ICDM
Vineet Chaoji, Mohammad Al Hasan, Saeed Salem, Mohammed J. Zaki
2008 J jnl
Special Issue on the Best Papers of SDM'08.
Stat. Anal. Data Min.
Mohammed J. Zaki, Ke Wang
2007 J jnl
Clicks: An effective algorithm for mining subspace clusters in categorical datasets.
Data Knowl. Eng.
Mohammed J. Zaki, Markus Peters, Ira Assent, Thomas Seidl
2007 — conf
Data Clustering Paradigms.
SBBD
Wagner Meira Jr., Mohammed J. Zaki
2007 J jnl
Data Mining in Bioinformatics (BIOKDD).
Algorithms Mol. Biol.
Mohammed J. Zaki, George Karypis, Jiong Yang
2007 — conf
Genome-scale disk-based suffix tree indexing.
SIGMOD Conference
Benjarath Phoophakdee, Mohammed J. Zaki
2006 J jnl
BIOKDD06: data mining in Bioinformatics.
SIGKDD Explor.
Mohammed J. Zaki, George Karypis, Jiong Yang
2006 A* conf
BLOSOM: a framework for mining arbitrary boolean expressions.
KDD
Lizhuang Zhao, Mohammed J. Zaki, Naren Ramakrishnan
2006 J jnl
EXMOTIF: efficient structured motif extraction.
Algorithms Mol. Biol.
Yongqiang Zhang, Mohammed J. Zaki
2006 A* conf
Lazy Associative Classification.
ICDM
Adriano Veloso, Wagner Meira Jr., Mohammed J. Zaki
2006 J jnl
SMOTIF: efficient structured pattern and profile motif search.
Algorithms Mol. Biol.
Yongqiang Zhang, Mohammed J. Zaki
2006 J jnl
The Complexity of Finding Top-Toda-Equivalence-Class Members.
Theory Comput. Syst.
Lane A. Hemaspaandra, Mitsunori Ogihara, Mohammed J. Zaki, Marius Zimand
2005 — ed.
Proceedings of the 5th international workshop on Bioinformatics, BIOKDD 2005, Chicago, Illinois, USA, August 21, 2005
BIOKDD
Srinivasan Parthasarathy, Wei Wang, Mohammed J. Zaki
2000 — conf
High performance data mining (tutorial PM-3).
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Vipin Kumar, Mohammed J. Zaki
1999 J jnl
Parallel and distributed association mining: a survey.
IEEE Concurr.
Mohammed J. Zaki
1997 — conf
Arithmetic and logic operations with DNA.
DNA Based Computers
Vineet Gupta, Srinivasan Parthasarathy, Mohammed J. Zaki