Mohammad Shahrokh Esfahani

19 papers Misc 3Journal 11Unranked 5
YearRankTypeTitle / Venue / Authors
2019 J jnl
Constructing Pathway-Based Priors within a Gaussian Mixture Model for Bayesian Regression and Classification.
IEEE ACM Trans. Comput. Biol. Bioinform.
Shahin Boluki, Mohammad Shahrokh Esfahani, Xiaoning Qian, Edward R. Dougherty
2018 J jnl
Optimal Bayesian Kalman Filtering With Prior Update.
IEEE Trans. Signal Process.
Roozbeh Dehghannasiri, Mohammad Shahrokh Esfahani, Xiaoning Qian, Edward R. Dougherty
2017 Misc conf
Bayesian Kalman filtering in the presence of unknown noise statistics using factor graphs.
ACSSC
Roozbeh Dehghannasiri, Mohammad Shahrokh Esfahani, Xiaoning Qian, Edward R. Dougherty
2017 J jnl
Incorporating biological prior knowledge for Bayesian learning via maximal knowledge-driven information priors.
BMC Bioinform.
Shahin Boluki, Mohammad Shahrokh Esfahani, Xiaoning Qian, Edward R. Dougherty
2017 J jnl
Intrinsically Bayesian Robust Kalman Filter: An Innovation Process Approach.
IEEE Trans. Signal Process.
Roozbeh Dehghannasiri, Mohammad Shahrokh Esfahani
2016 Misc conf
A Bayesian framework for robust Kalman filtering under uncertain noise statistics.
ACSSC
Roozbeh Dehghannasiri, Mohammad Shahrokh Esfahani, Edward R. Dougherty
2016 — conf
Inference of Nonlinear ODE-Based Gene Regulatory Networks via Intrinsically Bayesian Robust Kalman Filtering.
BCB
Roozbeh Dehghannasiri, Mohammad Shahrokh Esfahani, Edward R. Dougherty
2016 — conf
Noninvasive Cancer Classification Using Diverse Genomic Features in Circulating Tumor DNA.
BCB
Mohammad Shahrokh Esfahani, Aaron M. Newman, Florian Scherer, Robert Tibshirani, Maximilian Diehn, Ash A. Alizadeh
2015 J jnl
An Optimization-Based Framework for the Transformation of Incomplete Biological Knowledge into a Probabilistic Structure and Its Application to the Utilization of Gene/Protein Signaling Pathways in Discrete Phenotype Classification.
IEEE ACM Trans. Comput. Biol. Bioinform.
Mohammad Shahrokh Esfahani, Edward R. Dougherty
2015 J jnl
Discrete optimal Bayesian classification with error-conditioned sequential sampling.
Pattern Recognit.
Ariana Broumand, Mohammad Shahrokh Esfahani, Byung-Jun Yoon, Edward R. Dougherty
2014 J jnl
Effect of separate sampling on classification accuracy.
Bioinform.
Mohammad Shahrokh Esfahani, Edward R. Dougherty
2014 J jnl
Incorporation of Biological PathwayKnowledge in the Construction of Priorsfor Optimal Bayesian Classification.
IEEE ACM Trans. Comput. Biol. Bioinform.
Mohammad Shahrokh Esfahani, Edward R. Dougherty
2013 J jnl
A Cooperative MARC Scheme Using Analogue Network Coding to Achieve Second-Order Diversity
CoRR
Mohammad Shahrokh Esfahani, Masoumeh Nasiri-Kenari
2013 J jnl
Classifier design given an uncertainty class of feature distributions via regularized maximum likelihood and the incorporation of biological pathway knowledge in steady-state phenotype classification.
Pattern Recognit.
Mohammad Shahrokh Esfahani, Jason M. Knight, Amin Zollanvari, Byung-Jun Yoon, Edward R. Dougherty
2013 — conf
Effect of separate sampling on classification and the minimax criterion.
GENSiPS
Mohammad Shahrokh Esfahani, Edward R. Dougherty
2013 Misc conf
Sample-based prior probability construction using biological pathway knowledge.
ACSSC
Mohammad Shahrokh Esfahani, Edward R. Dougherty
2012 — conf
OBGene: Optimal barcode generator for NGS experiments.
GENSiPS
Esmaeil Atashpaz-Gargari, Mohammad Shahrokh Esfahani, Richard Metz, Charles D. Johnson
2011 — conf
Designing enhanced classifiers using prior process knowledge: Regularized maximum-likelihood.
GENSiPS
Mohammad Shahrokh Esfahani, Amin Zollanvari, Byung-Jun Yoon, Edward R. Dougherty
2011 J jnl
Probabilistic reconstruction of the tumor progression process in gene regulatory networks in the presence of uncertainty.
BMC Bioinform.
Mohammad Shahrokh Esfahani, Byung-Jun Yoon, Edward R. Dougherty