Miroslav Kratochvíl

18 papers A* 1B 1C 1Journal 10Unranked 5

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Algebraic differentiation for fast sensitivity analysis of optimal flux modes in metabolic models. Bioinform. Hester Chapman, Miroslav Kratochvíl, Oliver Ebenhöh, St. Elmo Wilken
2025	J	`jnl`	COBREXA 2: tidy and scalable construction of complex metabolic models. Bioinform. Miroslav Kratochvíl, St. Elmo Wilken, Oliver Ebenhöh, Reinhard Schneider, Venkata P. Satagopam
2024	J	`jnl`	Maboss for HPC environments: implementations of the continuous time Boolean model simulator for large CPU clusters and GPU accelerators. BMC Bioinform. Adam Smelko, Miroslav Kratochvíl, Emmanuel Barillot, Vincent Noël
2022	C	`conf`	Astute Approach to Handling Memory Layouts of Regular Data Structures. ICA3PP Adam Smelko, Martin Krulis, Miroslav Kratochvíl, Jirí Klepl, Jirí Mayer, Petr Simunek
2022	J	`jnl`	COBREXA.jl: constraint-based reconstruction and exascale analysis. Bioinform. Miroslav Kratochvíl, Laurent Heirendt, St. Elmo Wilken, Taneli Pusa, Sylvain Arreckx, Alberto Noronha, Marvin van Aalst, Venkata P. Satagopam, Oliver Ebenhöh, Reinhard Schneider, Christophe Trefois, Wei Gu
2022	J	`jnl`	Scalable semi-supervised dimensionality reduction with GPU-accelerated EmbedSOM. CoRR Adam Smelko, Sona Molnárová, Miroslav Kratochvíl, Abhishek Koladiya, Jan Musil, Martin Krulis, Jirí Vondrásek
2022	—	`conf`	Translational Challenges of Biomedical Machine Learning Solutions in Clinical and Laboratory Settings. IWBBIO (2) Carlos Vega, Miroslav Kratochvíl, Venkata P. Satagopam, Reinhard Schneider
2021	—	`conf`	GPU-Accelerated Mahalanobis-Average Hierarchical Clustering Analysis. Euro-Par Adam Smelko, Miroslav Kratochvíl, Martin Krulis, Tomás Sieger
2021	J	`jnl`	On the User-Centric Comparative Remote Evaluation of Interactive Video Search Systems. IEEE Multim. Luca Rossetto, Ralph Gasser, Silvan Heller, Mahnaz Parian-Scherb, Loris Sauter, Florian Spiess, Heiko Schuldt, Ladislav Peska, Tomás Soucek, Miroslav Kratochvíl, Frantisek Mejzlík, Patrik Veselý, Jakub Lokoc
2020	J	`jnl`	Correction to: Interoperable chemical structure search service. J. Cheminformatics Miroslav Kratochvíl, Jirí Vondrásek, Jakub Galgonek
2020	B	`conf`	Detailed Analysis and Optimization of CUDA K-means Algorithm. ICPP Martin Krulis, Miroslav Kratochvíl
2020	—	`conf`	SOM-Hunter: Video Browsing with Relevance-to-SOM Feedback Loop. MMM (2) Miroslav Kratochvíl, Patrik Veselý, Frantisek Mejzlík, Jakub Lokoc
2020	—	`conf`	SOMHunter for Lifelog Search. LSC@ICMR Frantisek Mejzlík, Patrik Veselý, Miroslav Kratochvíl, Tomás Soucek, Jakub Lokoc
2020	A*	`conf`	SOMHunter: Lightweight Video Search System with SOM-Guided Relevance Feedback. ACM Multimedia Miroslav Kratochvíl, Frantisek Mejzlík, Patrik Veselý, Tomás Soucek, Jakub Lokoc
2020	J	`jnl`	ShinySOM: graphical SOM-based analysis of single-cell cytometry data. Bioinform. Miroslav Kratochvíl, David Bednárek, Tomás Sieger, Karel Fiser, Jirí Vondrásek
2019	J	`jnl`	Interoperable chemical structure search service. J. Cheminformatics Miroslav Kratochvíl, Jirí Vondrásek, Jakub Galgonek
2018	J	`jnl`	Sachem: a chemical cartridge for high-performance substructure search. J. Cheminformatics Miroslav Kratochvíl, Jirí Vondrásek, Jakub Galgonek
2016	—	`conf`	Compiling Functional Code for System-Level Environment. ITAT Miroslav Kratochvíl