Milan Sonka - RankMe

271 papers A* 9A 6B 61Misc 5Journal 104Unranked 79

Year	Rank	Type	Title / Venue / Authors
2026	J	`jnl`	Latent diffusion for medical image segmentation: End-to-end learning for fast sampling and accuracy. Biomed. Signal Process. Control. Fahim Ahmed Zaman, Mathews Jacob, Amanda Chang, Kan Liu, Milan Sonka, Xiaodong Wu
2025	J	`jnl`	Fully automated IVUS image segmentation with efficient deep-learning-assisted annotation. Comput. Biol. Medicine Lichun Zhang, Zhi Chen, Honghai Zhang, Fahim A. Zaman, Andreas Wahle, Xiaodong Wu, Coleen A. McNamara, Angela M. Taylor, Milan Sonka
2025	A	`conf`	Sli2Vol+: Segmenting 3D Medical Images Based on an Object Estimation Guided Correspondence Flow Network. WACV Delin An, Pengfei Gu, Milan Sonka, Chaoli Wang, Danny Z. Chen
2025	—	`conf`	Spectral U-Net: Enhancing Medical Image Segmentation via Spectral Decomposition. ISBI Yaopeng Peng, Danny Z. Chen, Milan Sonka
2025	—	`conf`	U-Net V2: Rethinking the Skip Connections of U-Net for Medical Image Segmentation. ISBI Yaopeng Peng, Danny Z. Chen, Milan Sonka
2024	J	`jnl`	Denoising Diffusions in Latent Space for Medical Image Segmentation. CoRR Fahim Ahmed Zaman, Mathews Jacob, Amanda Chang, Kan Liu, Milan Sonka, Xiaodong Wu
2024	J	`jnl`	FiAt-Net: Detecting Fibroatheroma Plaque Cap in 3D Intravascular OCT Images. CoRR Yaopeng Peng, Zhi Chen, Andreas Wahle, Tomas Kovarnik, Milan Sonka, Danny Z. Chen
2024	A*	`conf`	Group Vision Transformer. ACM Multimedia Yaopeng Peng, Milan Sonka, Danny Z. Chen
2024	A	`conf`	PHG-Net: Persistent Homology Guided Medical Image Classification WACV Yaopeng Peng, Hongxiao Wang, Milan Sonka, Danny Z. Chen
2024	J	`jnl`	Sli2Vol+: Segmenting 3D Medical Images Based on an Object Estimation Guided Correspondence Flow Network. CoRR Delin An, Pengfei Gu, Milan Sonka, Chaoli Wang, Danny Z. Chen
2024	J	`jnl`	Spectral U-Net: Enhancing Medical Image Segmentation via Spectral Decomposition. CoRR Yaopeng Peng, Milan Sonka, Danny Z. Chen
2024	—	`conf`	Surf-CDM: Score-Based Surface Cold-Diffusion Model for Medical Image Segmentation. ISBI Fahim Ahmed Zaman, Mathews Jacob, Amanda Chang, Kan Liu, Milan Sonka, Xiaodong Wu
2023	J	`jnl`	PHG-Net: Persistent Homology Guided Medical Image Classification. CoRR Yaopeng Peng, Hongxiao Wang, Milan Sonka, Danny Z. Chen
2023	A*	`conf`	Provable Multi-instance Deep AUC Maximization with Stochastic Pooling. ICML Dixian Zhu, Bokun Wang, Zhi Chen, Yaxing Wang, Milan Sonka, Xiaodong Wu, Tianbao Yang
2023	J	`jnl`	Provable Multi-instance Deep AUC Maximization with Stochastic Pooling. CoRR Dixian Zhu, Bokun Wang, Zhi Chen, Yaxing Wang, Milan Sonka, Xiaodong Wu, Tianbao Yang
2023	J	`jnl`	Segmentation quality assessment by automated detection of erroneous surface regions in medical images. Comput. Biol. Medicine Fahim A. Zaman, Lichun Zhang, Honghai Zhang, Milan Sonka, Xiaodong Wu
2023	J	`jnl`	Sensitivity of CNN image analysis to multifaceted measurements of neurite growth. BMC Bioinform. Joseph T. Vecchi, Sean Mullan, Josue A. Lopez, Madeline Rhomberg, Annamarie Yamamoto, Annabelle Hallam, Amy Lee, Milan Sonka, Marlan R. Hansen
2023	J	`jnl`	Surf-CDM: Score-Based Surface Cold-Diffusion Model For Medical Image Segmentation. CoRR Fahim Ahmed Zaman, Mathews Jacob, Amanda Chang, Kan Liu, Milan Sonka, Xiaodong Wu
2023	Misc	`conf`	Trust, but Verify: Robust Image Segmentation using Deep Learning. ACSSC Fahim Ahmed Zaman, Xiaodong Wu, Weiyu Xu, Milan Sonka, Raghuraman Mudumbai
2023	J	`jnl`	Trust, but Verify: Robust Image Segmentation using Deep Learning. CoRR Fahim Ahmed Zaman, Xiaodong Wu, Weiyu Xu, Milan Sonka, Raghuraman Mudumbai
2023	J	`jnl`	U-Net v2: Rethinking the Skip Connections of U-Net for Medical Image Segmentation. CoRR Yaopeng Peng, Milan Sonka, Danny Z. Chen
2022	J	`jnl`	CMC-Net: 3D calf muscle compartment segmentation with sparse annotation. Medical Image Anal. Yaopeng Peng, Hao Zheng, Lichun Zhang, Milan Sonka, Danny Z. Chen
2022	J	`jnl`	KCB-Net: A 3D knee cartilage and bone segmentation network via sparse annotation. Medical Image Anal. Yaopeng Peng, Hao Zheng, Peixian Liang, Lichun Zhang, Fahim A. Zaman, Xiaodong Wu, Milan Sonka, Danny Z. Chen
2022	B	`conf`	Semi-automated intracranial aneurysm segmentation and neck detection. Image Processing Nam H. Le, Edgar A. Samaniego, Ashrita Raghuram, Sebastián Sánchez, Honghai Zhang, Milan Sonka
2022	B	`conf`	Visual attribution for deep learning segmentation in medical imaging. Image Processing Sean Mullan, Milan Sonka
2021	J	`jnl`	Fully automated 3D segmentation of MR-imaged calf muscle compartments: Neighborhood relationship enhanced fully convolutional network. Comput. Medical Imaging Graph. Zhihui Guo, Honghai Zhang, Zhi Chen, Ellen van der Plas, Laurie Gutmann, Daniel Thedens, Peggy Nopoulos, Milan Sonka
2021	A*	`conf`	Large-scale Robust Deep AUC Maximization: A New Surrogate Loss and Empirical Studies on Medical Image Classification. ICCV Zhuoning Yuan, Yan Yan, Milan Sonka, Tianbao Yang
2020	J	`jnl`	COVID CT-Net: Predicting Covid-19 From Chest CT Images Using Attentional Convolutional Network. CoRR Shakib Yazdani, Shervin Minaee, Rahele Kafieh, Narges Saeedizadeh, Milan Sonka
2020	J	`jnl`	COVID TV-UNet: Segmenting COVID-19 Chest CT Images Using Connectivity Imposed U-Net. CoRR Narges Saeedizadeh, Shervin Minaee, Rahele Kafieh, Shakib Yazdani, Milan Sonka
2020	J	`jnl`	Deep-COVID: Predicting COVID-19 From Chest X-Ray Images Using Deep Transfer Learning. CoRR Shervin Minaee, Rahele Kafieh, Milan Sonka, Shakib Yazdani, Ghazaleh Jamalipour Soufi
2020	J	`jnl`	Deep-COVID: Predicting COVID-19 from chest X-ray images using deep transfer learning. Medical Image Anal. Shervin Minaee, Rahele Kafieh, Milan Sonka, Shakib Yazdani, Ghazaleh Jamalipour Soufi
2020	J	`jnl`	FilterNet: A Neighborhood Relationship Enhanced Fully Convolutional Network for Calf Muscle Compartment Segmentation. CoRR Zhihui Guo, Honghai Zhang, Zhi Chen, Ellen van der Plas, Laurie Gutmann, Daniel Thedens, Peggy Nopoulos, Milan Sonka
2020	B	`conf`	Multiresolution LOGISMOS graph search for automated choroidal layer segmentation of 3D macular OCT scans. Image Processing Kyungmoo Lee, Elliott H. Sohn, Honghai Zhang, Alexis K. Warren, Andreas Wahle, S. Scott Whitmore, Milan Sonka, Michael D. Abràmoff
2020	J	`jnl`	Robust Deep AUC Maximization: A New Surrogate Loss and Empirical Studies on Medical Image Classification. CoRR Zhuoning Yuan, Yan Yan, Milan Sonka, Tianbao Yang
2019	J	`jnl`	Automated Segmentation of Knee MRI Using Hierarchical Classifiers and Just Enough Interaction Based Learning: Data from Osteoarthritis Initiative. CoRR Satyananda Kashyap, Ipek Oguz, Honghai Zhang, Milan Sonka
2019	—	`conf`	DeepCenterline: A Multi-task Fully Convolutional Network for Centerline Extraction. IPMI Zhihui Guo, Junjie Bai, Yi Lu, Xin Wang, Kunlin Cao, Qi Song, Milan Sonka, Youbing Yin
2019	J	`jnl`	DeepCenterline: a Multi-task Fully Convolutional Network for Centerline Extraction. CoRR Zhihui Guo, Junjie Bai, Yi Lu, Xin Wang, Kunlin Cao, Qi Song, Milan Sonka, Youbing Yin
2019	J	`jnl`	Just-Enough Interaction Approach to Knee MRI Segmentation: Data from the Osteoarthritis Initiative. CoRR Satyananda Kashyap, Honghai Zhang, Milan Sonka
2019	J	`jnl`	Learning-Based Cost Functions for 3D and 4D Multi-Surface Multi-Object Segmentation of Knee MRI: Data from the Osteoarthritis Initiative. CoRR Satyananda Kashyap, Honghai Zhang, Karan Rao, Milan Sonka
2018	J	`jnl`	Deep LOGISMOS: Deep Learning Graph-based 3D Segmentation of Pancreatic Tumors on CT scans. CoRR Zhihui Guo, Ling Zhang, Le Lu, Mohammadhadi Bagheri, Ronald M. Summers, Milan Sonka, Jianhua Yao
2018	—	`conf`	Deep LOGISMOS: Deep learning graph-based 3D segmentation of pancreatic tumors on CT scans. ISBI Zhihui Quo, Ling Zhang, Le Lu, Mohammadhadi Bagheri, Ronald M. Summers, Milan Sonka, Jianhua Yao
2018	J	`jnl`	Learning-Based Cost Functions for 3-D and 4-D Multi-Surface Multi-Object Segmentation of Knee MRI: Data From the Osteoarthritis Initiative. IEEE Trans. Medical Imaging Satyananda Kashyap, Honghai Zhang, Karan Rao, Milan Sonka
2018	J	`jnl`	Predicting Locations of High-Risk Plaques in Coronary Arteries in Patients Receiving Statin Therapy. IEEE Trans. Medical Imaging Ling Zhang, Andreas Wahle, Zhi Chen, John J. Lopez, Tomas Kovarnik, Milan Sonka
2018	J	`jnl`	Quantitative 3D Analysis of Coronary Wall Morphology in Heart Transplant Patients: OCT-Assessed Cardiac Allograft Vasculopathy Progression. Medical Image Anal. Zhi Chen, Michal Pazdernik, Honghai Zhang, Andreas Wahle, Zhihui Guo, Helena Bedanova, Josef Kautzner, Vojtech Melenovsky, Tomas Kovarnik, Milan Sonka
2017	J	`jnl`	A machine-learning graph-based approach for 3D segmentation of Bruch's membrane opening from glaucomatous SD-OCT volumes. Medical Image Anal. Mohammad Saleh Miri, Michael D. Abràmoff, Young H. Kwon, Milan Sonka, Mona Kathryn Garvin
2017	—	`conf`	Combining fully convolutional networks and graph-based approach for automated segmentation of cervical cell nuclei. ISBI Ling Zhang, Milan Sonka, Le Lu, Ronald M. Summers, Jianhua Yao
2017	J	`jnl`	CorteXpert: A model-based method for automatic renal cortex segmentation. Medical Image Anal. Dehui Xiang, Ulas Bagci, Chao Jin, Fei Shi, Weifang Zhu, Jianhua Yao, Milan Sonka, Xinjian Chen
2017	—	`conf`	Development of a radiobiological evaluation tool to assess the expected clinical impacts of contouring accuracy between manual and semi-automated segmentation algorithms. EMBC Yusung Kim, Kaustubh Anil Patwardhan, Reinhard R. Beichel, Brian J. Smith, Christopher Mart, Kristin A. Plichta, Tangel Chang, Milan Sonka, Michael M. Graham, Vince Magnotta, Thomas L. Casavant, Junyi Xia, John M. Buatti
2017	A*	`conf`	Efficient Optimization for Hierarchically-Structured Interacting Segments (HINTS). CVPR Hossam N. Isack, Olga Veksler, Ipek Oguz, Milan Sonka, Yuri Boykov
2017	J	`jnl`	Efficient optimization for Hierarchically-structured Interacting Segments (HINTS). CoRR Hossam N. Isack, Olga Veksler, Ipek Oguz, Milan Sonka, Yuri Boykov
2017	J	`jnl`	Graph-based segmentation of abnormal nuclei in cervical cytology. Comput. Medical Imaging Graph. Ling Zhang, Hui Kong, Shaoxiong Liu, Tianfu Wang, Siping Chen, Milan Sonka
2017	B	`conf`	Machine learning in a graph framework for subcortical segmentation. Image Processing Zhihui Guo, Satyananda Kashyap, Milan Sonka, Ipek Oguz
2016	—	`conf`	Automated Segmentation of Knee MRI Using Hierarchical Classifiers and Just Enough Interaction Based Learning: Data from Osteoarthritis Initiative. MICCAI (2) Satyananda Kashyap, Ipek Oguz, Honghai Zhang, Milan Sonka
2016	—	`conf`	Comparative study of multimodal intra-subject image registration methods on a publicly available database. Biomedical Applications in Molecular, Structural, and Functional Imaging Mohammad Saleh Miri, Ali Ghayoor, Hans J. Johnson, Milan Sonka
2016	—	`conf`	Comprehensive serial study of dynamic remodeling of atherosclerotic coronary arteries using IVUS. Biomedical Applications in Molecular, Structural, and Functional Imaging Zhi Chen, Andreas Wahle, Ling Zhang, Tomas Kovarnik, John J. Lopez, Milan Sonka
2016	—	`conf`	Globally Optimal Label Fusion with Shape Priors. MICCAI (2) Ipek Oguz, Satyananda Kashyap, Hongzhi Wang, Paul A. Yushkevich, Milan Sonka
2016	A*	`conf`	Hedgehog Shape Priors for Multi-Object Segmentation. CVPR Hossam N. Isack, Olga Veksler, Milan Sonka, Yuri Boykov
2016	—	`conf`	Location-specific prediction of vulnerable plaque using IVUS, virtual histology, and spatial context. ISBI Ling Zhang, Andreas Wahle, Zhi Chen, John J. Lopez, Tomas Kovarnik, Milan Sonka
2016	B	`conf`	Optimal retinal cyst segmentation from OCT images. Image Processing Ipek Oguz, Li Zhang, Michael D. Abràmoff, Milan Sonka
2016	J	`jnl`	Quantitative analysis of retinal OCT. Medical Image Anal. Milan Sonka, Michael D. Abràmoff
2016	—	`conf`	Statistical shape analysis of automatically segmented femur bones: Data from the osteoarthritis initiative. ISBI Satyananda Kashyap, Ipek Oguz, Milan Sonka
2015	J	`jnl`	Automated 3-D Retinal Layer Segmentation of Macular Optical Coherence Tomography Images With Serous Pigment Epithelial Detachments. IEEE Trans. Medical Imaging Fei Shi, Xinjian Chen, Heming Zhao, Weifang Zhu, Dehui Xiang, Enting Gao, Milan Sonka, Haoyu Chen
2015	B	`conf`	Fast and memory-efficient LOGISMOS graph search for intraretinal layer segmentation of 3D macular OCT scans. Image Processing Kyungmoo Lee, Li Zhang, Michael D. Abràmoff, Milan Sonka
2015	—	`conf`	Improved segmentation of abnormal cervical nuclei using a graph-search based approach. Digital Pathology Ling Zhang, Shaoxiong Liu, Tianfu Wang, Siping Chen, Milan Sonka
2015	B	`conf`	Joint registration of location and orientation of intravascular ultrasound pullbacks using a 3D graph based method. Image Processing Ling Zhang, Andreas Wahle, Zhi Chen, Li Zhang, Richard W. Downe, Tomas Kovarnik, Milan Sonka
2015	B	`conf`	LOGISMOS-B for primates: primate cortical surface reconstruction and thickness measurement. Image Processing Ipek Oguz, Martin Styner, Mar Sanchez, Yundi Shi, Milan Sonka
2015	—	`conf`	Prospective Prediction of Thin-Cap Fibroatheromas from Baseline Virtual Histology Intravascular Ultrasound Data. MICCAI (2) Ling Zhang, Andreas Wahle, Zhi Chen, John J. Lopez, Tomas Kovarnik, Milan Sonka
2015	J	`jnl`	Simultaneous Registration of Location and Orientation in Intravascular Ultrasound Pullbacks Pairs Via 3D Graph-Based Optimization. IEEE Trans. Medical Imaging Ling Zhang, Andreas Wahle, Zhi Chen, Li Zhang, Richard W. Downe, Tomas Kovarnik, Milan Sonka
2015	J	`jnl`	Stratified Sampling Voxel Classification for Segmentation of Intraretinal and Subretinal Fluid in Longitudinal Clinical OCT Data. IEEE Trans. Medical Imaging Xiayu Xu, Kyungmoo Lee, Li Zhang, Milan Sonka, Michael D. Abràmoff
2014	—	`conf`	Automated surface segmentation of internal limiting membrane in spectral-domain optical coherence tomography volumes with a deep cup using a 3-D range expansion approach. ISBI Abhay Shah, Jui-Kai Wang, Mona Kathryn Garvin, Milan Sonka, Xiaodong Wu
2014	J	`jnl`	LOGISMOS-B: Layered Optimal Graph Image Segmentation of Multiple Objects and Surfaces for the Brain. IEEE Trans. Medical Imaging Ipek Oguz, Milan Sonka
2014	J	`jnl`	Multi-Surface and Multi-Field Co-Segmentation of 3-D Retinal Optical Coherence Tomography. IEEE Trans. Medical Imaging Hrvoje Bogunovic, Milan Sonka, Young H. Kwon, Pavlina Kemp, Michael D. Abràmoff, Xiaodong Wu
2014	—	`conf`	Robust Cortical Thickness Measurement with LOGISMOS-B. MICCAI (1) Ipek Oguz, Milan Sonka
2013	—	`conf`	Automated analysis of cartilage morphology. ISBI Satyananda Kashyap, Yin Yin, Milan Sonka
2013	J	`jnl`	Graph-Based IVUS Segmentation With Efficient Computer-Aided Refinement. IEEE Trans. Medical Imaging Shanhui Sun, Milan Sonka, Reinhard Beichel
2013	—	`conf`	Graph-based 4D lung segmentation in CT images with expert-guided computer-aided refinement. ISBI Shanhui Sun, Milan Sonka, Reinhard Beichel
2013	J	`jnl`	Intra-retinal layer segmentation of 3D optical coherence tomography using coarse grained diffusion map. Medical Image Anal. Rahele Kafieh, Hossein Rabbani, Michael D. Abràmoff, Milan Sonka
2013	Misc	`conf`	Intra-retinal layer segmentation of optical coherence tomography using diffusion map. ICASSP Rahele Kafieh, Hossein Rabbani, Michael Abramoff, Milan Sonka
2013	J	`jnl`	Lung segmentation refinement based on optimal surface finding utilizing a hybrid desktop/virtual reality user interface. Comput. Medical Imaging Graph. Shanhui Sun, Milan Sonka, Reinhard Beichel
2013	J	`jnl`	Optical Coherence Tomography Noise Reduction Using Anisotropic Local Bivariate Gaussian Mixture Prior in 3D Complex Wavelet Domain. Int. J. Biomed. Imaging Hossein Rabbani, Milan Sonka, Michael D. Abràmoff
2013	J	`jnl`	Optimal Graph Search Based Segmentation of Airway Tree Double Surfaces Across Bifurcations. IEEE Trans. Medical Imaging Xiaomin Liu, Danny Z. Chen, Merryn H. Tawhai, Xiaodong Wu, Eric A. Hoffman, Milan Sonka
2013	J	`jnl`	Optimal Multiple Surface Segmentation With Shape and Context Priors. IEEE Trans. Medical Imaging Qi Song, Junjie Bai, Mona Kathryn Garvin, Milan Sonka, John M. Buatti, Xiaodong Wu
2013	J	`jnl`	Thickness Mapping of Eleven Retinal Layers in Normal Eyes Using Spectral Domain Optical Coherence Tomography. CoRR Rahele Kafieh, Hossein Rabbani, Fedra Hajizadeh, Michael D. Abràmoff, Milan Sonka
2013	Misc	`conf`	Vessel segmentation in images of optical coherence tomography using shadow information and thickening of Retinal Nerve Fiber Layer. ICASSP Rahele Kafieh, Hajar Danesh, Hossein Rabbani, Michael Abramoff, Milan Sonka
2012	B	`conf`	Efficient searching of globally optimal and smooth multisurfaces with shape priors. Image Processing Lei Xu, Branislav Stojkovic, Hu Ding, Qi Song, Xiaodong Wu, Milan Sonka, Jinhui Xu
2012	B	`conf`	Incorporation of texture-based features in optimal graph-theoretic approach with application to the 3D segmentation of intraretinal surfaces in SD-OCT volumes. Image Processing Bhavna Josephine Antony, Michael D. Abràmoff, Milan Sonka, Young H. Kwon, Mona Kathryn Garvin
2012	J	`jnl`	Intra-Retinal Layer Segmentation of 3D Optical Coherence Tomography Using Coarse Grained Diffusion Map CoRR Rahele Kafieh, Hossein Rabbani, Michael D. Abràmoff, Milan Sonka
2012	B	`conf`	Parallel graph search: application to intraretinal layer segmentation of 3-D macular OCT scans. Image Processing Kyungmoo Lee, Michael D. Abràmoff, Mona Kathryn Garvin, Milan Sonka
2012	B	`conf`	Registration of 3D spectral OCT volumes combining ICP with a graph-based approach. Image Processing Meindert Niemeijer, Kyungmoo Lee, Mona Kathryn Garvin, Michael D. Abràmoff, Milan Sonka
2012	J	`jnl`	Three-Dimensional Segmentation of Fluid-Associated Abnormalities in Retinal OCT: Probability Constrained Graph-Search-Graph-Cut. IEEE Trans. Medical Imaging Xinjian Chen, Meindert Niemeijer, Li Zhang, Kyungmoo Lee, Michael D. Abràmoff, Milan Sonka
2011	J	`jnl`	A New Osteophyte Segmentation Algorithm Using the Partial Shape Model and Its Applications to Rabbit Femur Anterior Cruciate Ligament Transection via Micro-CT Imaging. IEEE Trans. Biomed. Eng. Punam K. Saha, Guoyuan Liang, Jacob M. Elkins, Alexandre Coimbra, Le Thi Duong, Donald S. Williams, Milan Sonka
2011	—	`conf`	Efficient Algorithms for Segmenting Globally Optimal and Smooth Multi-surfaces. IPMI Lei Xu, Branislav Stojkovic, Yongding Zhu, Qi Song, Xiaodong Wu, Milan Sonka, Jinhui Xu
2011	—	`conf`	Faster Segmentation Algorithm for Optical Coherence Tomography Images with Guaranteed Smoothness. MLMI Lei Xu, Branislav Stojkovic, Hu Ding, Qi Song, Xiaodong Wu, Milan Sonka, Jinhui Xu
2011	A*	`conf`	Feature guided motion artifact reduction with structure-awareness in 4D CT images. CVPR Dongfeng Han, John E. Bayouth, Qi Song, Sudershan Bhatia, Milan Sonka, Xiaodong Wu
2011	—	`conf`	Globally Optimal Tumor Segmentation in PET-CT Images: A Graph-Based Co-segmentation Method. IPMI Dongfeng Han, John E. Bayouth, Qi Song, Aakant Taurani, Milan Sonka, John M. Buatti, Xiaodong Wu
2011	—	`conf`	IVUS-based assessment of 3D morphology and virtual histology: Prediction of atherosclerotic plaque status and changes. EMBC Milan Sonka, Richard W. Downe, Justin W. Garvin, John J. Lopez, Tomas Kovarnik, Andreas Wahle
2011	J	`jnl`	Improved tensor scale computation with application to medical image interpolation. Comput. Medical Imaging Graph. Ziyue Xu, Milan Sonka, Punam K. Saha
2011	B	`conf`	Maximum Weight Digital Regions Decomposable into Digital Star-Shaped Regions. ISAAC Matt Gibson, Dongfeng Han, Milan Sonka, Xiaodong Wu
2011	J	`jnl`	Region Detection by Minimizing Intraclass Variance With Geometric Constraints, Global Optimality, and Efficient Approximation. IEEE Trans. Medical Imaging Xiaodong Wu, Xin Dou, Andreas Wahle, Milan Sonka
2011	—	`conf`	Segmentation of pathological and diseased lung tissue in CT images using a graph-search algorithm. ISBI Panfang Hua, Qi Song, Milan Sonka, Eric A. Hoffman, Joseph M. Reinhardt
2011	Misc	`conf`	Signal processing in medical imaging and image-guided intervention. ICASSP Milan Sonka
2011	—	`conf`	Surface-Region Context in Optimal Multi-object Graph-Based Segmentation: Robust Delineation of Pulmonary Tumors. IPMI Qi Song, Mingqing Chen, Junjie Bai, Milan Sonka, Xiaodong Wu
2011	J	`jnl`	Vessel Boundary Delineation on Fundus Images Using Graph-Based Approach. IEEE Trans. Medical Imaging Xiayu Xu, Meindert Niemeijer, Qi Song, Milan Sonka, Mona Kathryn Garvin, Joseph M. Reinhardt, Michael D. Abràmoff
2010	J	`jnl`	4-D Cardiac MR Image Analysis: Left and Right Ventricular Morphology and Function. IEEE Trans. Medical Imaging Honghai Zhang, Andreas Wahle, Ryan K. Johnson, Thomas D. Scholz, Milan Sonka
2010	B	`conf`	A new osteophyte segmentation method with applications to an anterior cruciate ligament transection rabbit femur model via micro-CT imaging. Image Processing Guoyuan Liang, Jacob M. Elkins, Alexandre Coimbra, Le Thi Duong, Donald S. Williams, Milan Sonka, Punam K. Saha
2010	J	`jnl`	Editorial. IEEE Trans. Medical Imaging Milan Sonka
2010	B	`conf`	Electric field theory based approach to search-direction line definition in image segmentation: application to optimal femur-tibia cartilage segmentation in knee-joint 3-D MR. Image Processing Yin Yin, Milan Sonka
2010	—	`conf`	Graph Search with Appearance and Shape Information for 3-D Prostate and Bladder Segmentation. MICCAI (3) Qi Song, Yinxiao Liu, Yunlong Liu, Punam K. Saha, Milan Sonka, Xiaodong Wu
2010	J	`jnl`	LOGISMOS - Layered Optimal Graph Image Segmentation of Multiple Objects and Surfaces: Cartilage Segmentation in the Knee Joint. IEEE Trans. Medical Imaging Yin Yin, Xiangmin Zhang, Rachel Williams, Xiaodong Wu, Donald D. Anderson, Milan Sonka
2010	—	`ed.`	Medical Biometrics, Second International Conference, ICMB 2010, Hong Kong, China, June 28-30, 2010. Proceedings ICMB David Zhang, Milan Sonka
2010	—	`conf`	Motion Artifact Reduction in 4D Helical CT: Graph-Based Structure Alignment. MCV Dongfeng Han, John E. Bayouth, Sudershan Bhatia, Milan Sonka, Xiaodong Wu
2010	—	`conf`	Multi-scale Topo-morphometric Opening of Arteries and Veins: An Evaluative Study via Pulmonary CT Imaging. ISVC (3) Zhiyun Gao, Colin Holtze, Randall Grout, Milan Sonka, Eric A. Hoffman, Punam K. Saha
2010	B	`conf`	Multiscale topo-morphologic opening of arteries and veins: a validation study on phantoms and CT imaging of pulmonary vessel casting of pigs. Image Processing Zhiyun Gao, Colin Holtze, Milan Sonka, Eric A. Hoffman, Punam K. Saha
2010	J	`jnl`	Optimal multiple-seams search for image resizing with smoothness and shape prior. Vis. Comput. Dongfeng Han, Milan Sonka, John E. Bayouth, Xiaodong Wu
2010	J	`jnl`	Segmentation of the Optic Disc in 3-D OCT Scans of the Optic Nerve Head. IEEE Trans. Medical Imaging Kyungmoo Lee, Meindert Niemeijer, Mona Kathryn Garvin, Young H. Kwon, Milan Sonka, Michael D. Abràmoff
2010	—	`conf`	Shape and motion analysis of left ventricle dyssynchrony from real-time 3D echocardiography. ISBI Honghai Zhang, Ademola K. Abiose, Dwayne N. Campbelz, Milan Sonka, James B. Martins, Andreas Wahle
2010	A*	`conf`	Simultaneous searching of globally optimal interacting surfaces with shape priors. CVPR Qi Song, Xiaodong Wu, Yunlong Liu, Milan Sonka, Mona Kathryn Garvin
2010	J	`jnl`	Three-Dimensional Analysis of Retinal Layer Texture: Identification of Fluid-Filled Regions in SD-OCT of the Macula. IEEE Trans. Medical Imaging Gwenolé Quellec, Kyungmoo Lee, Martin Dolejsi, Mona Kathryn Garvin, Michael D. Abràmoff, Milan Sonka
2010	J	`jnl`	Three-dimensional thrombus segmentation in abdominal aortic aneurysms using graph search based on a triangular mesh. Comput. Biol. Medicine Kyungmoo Lee, Ryan K. Johnson, Yin Yin, Andreas Wahle, Mark E. Olszewski, Thomas D. Scholz, Milan Sonka
2010	J	`jnl`	Topomorphologic Separation of Fused Isointensity Objects via Multiscale Opening: Separating Arteries and Veins in 3-D Pulmonary CT. IEEE Trans. Medical Imaging Punam K. Saha, Zhiyun Gao, Sara K. Alford, Milan Sonka, Eric A. Hoffman
2009	B	`conf`	A novel multiscale topo-morphometric approach for separating arteries and veins via pulmonary CT imaging. Image Processing Punam K. Saha, Zhiyun Gao, Sara K. Alford, Milan Sonka, Eric A. Hoffman
2009	J	`jnl`	Automated 3-D Intraretinal Layer Segmentation of Macular Spectral-Domain Optical Coherence Tomography Images. IEEE Trans. Medical Imaging Mona Kathryn Garvin, Michael D. Abràmoff, Xiaodong Wu, Stephen R. Russell, Trudy L. Burns, Milan Sonka
2009	J	`jnl`	Congenital aortic disease: 4D magnetic resonance segmentation and quantitative analysis. Medical Image Anal. Fei Zhao, Honghai Zhang, Andreas Wahle, Matthew T. Thomas, Alan Stolpen, Thomas D. Scholz, Milan Sonka
2009	J	`jnl`	Editorial. IEEE Trans. Medical Imaging Milan Sonka
2009	—	`conf`	Electric Field Theory Motivated Graph Construction for Optimal Medical Image Segmentation. GbRPR Yin Yin, Qi Song, Milan Sonka
2009	B	`conf`	Globally optimal 3D graph search incorporating both edge and regional information: application to aortic MR image segmentation. Image Processing Qi Song, Xiaodong Wu, Xin Dou, Milan Sonka
2009	—	`conf`	Optimal Graph Search Segmentation Using Arc-Weighted Graph for Simultaneous Surface Detection of Bladder and Prostate. MICCAI (1) Qi Song, Xiaodong Wu, Yunlong Liu, Mark Smith, John M. Buatti, Milan Sonka
2009	B	`conf`	Optimal graph search based image segmentation for objects with complex topologies. Image Processing Xiaomin Liu, Danny Z. Chen, Xiaodong Wu, Milan Sonka
2009	A*	`conf`	Optimal multiple surfaces searching for video/image resizing - a graph-theoretic approach. ICCV Dongfeng Han, Xiaodong Wu, Milan Sonka
2009	B	`conf`	Recent improvements in tensor scale computation and its applications to medical imaging. Image Processing Ziyue Xu, Milan Sonka, Punam K. Saha
2009	B	`conf`	Registration of 3D spectral OCT volumes using 3D SIFT feature point matching. Image Processing Meindert Niemeijer, Mona Kathryn Garvin, Kyungmoo Lee, Bram van Ginneken, Michael D. Abràmoff, Milan Sonka
2009	J	`jnl`	Segmentation of Pulmonary Vascular Trees from Thoracic 3D CT Images. Int. J. Biomed. Imaging Hidenori Shikata, Geoffrey McLennan, Eric A. Hoffman, Milan Sonka
2009	B	`conf`	Simultaneous segmentation of the bone and cartilage surfaces of a knee joint in 3D. Image Processing Y. Yin, X. Zhang, Donald D. Anderson, T. D. Brown, C. Van Hofwegen, Milan Sonka
2008	A*	`conf`	Globally optimal surface segmentation using regional properties of segmented objects. CVPR Xin Dou, Xiaodong Wu, Andreas Wahle, Milan Sonka
2008	—	`book`	Image processing, analysis and and machine vision (3. ed.). Milan Sonka, Václav Hlavác, Roger Boyle
2008	J	`jnl`	Intraretinal Layer Segmentation of Macular Optical Coherence Tomography Images Using Optimal 3-D Graph Search. IEEE Trans. Medical Imaging Mona Kathryn Garvin, Michael D. Abràmoff, Randy Kardon, Stephen R. Russell, Xiaodong Wu, Milan Sonka
2008	Misc	`conf`	Knowledge-Based Approaches to Quantitative Medical Image Analysis and Image-Based Decision Making. FAW Milan Sonka
2008	B	`conf`	Vessel segmentation in 3D spectral OCT scans of the retina. Image Processing Meindert Niemeijer, Mona Kathryn Garvin, Bram van Ginneken, Milan Sonka, Michael D. Abràmoff
2007	—	`conf`	A New Method for Spherical Object Detection and Its Application to Computer Aided Detection of Pulmonary Nodules in CT Images. MICCAI (1) Xiangwei Zhang, Jonathan Stoeckel, Matthias Wolf, Pascal Cathier, Geoffrey McLennan, Eric A. Hoffman, Milan Sonka
2007	B	`conf`	Active index model: a unique approach for regional quantitative morphometry in longitudinal and cross-sectional studies. Image Processing Punam Kumar Saha, H. Zhang, Milan Sonka, Gary E. Christensen, Chamith S. Rajapakse
2007	B	`conf`	Automated segmentation of intraretinal layers from macular optical coherence tomography images. Image Processing Mona Haeker, Milan Sonka, Randy Kardon, Vinay A. Shah, Xiaodong Wu, Michael D. Abràmoff
2007	—	`conf`	Incorporation of Regional Information in Optimal 3-D Graph Search with Application for Intraretinal Layer Segmentation of Optical Coherence Tomography Images. IPMI Mona Haeker, Xiaodong Wu, Michael D. Abràmoff, Randy Kardon, Milan Sonka
2007	—	`conf`	Pulmonary CT Image Analysis and Computer Aided Detection. ISBI Milan Sonka, Juerg Tschirren, Soumik Ukil, X. Zhang, Ye Xu, Joseph M. Reinhardt, Edwin J. R. van Beek, Geoffrey McLennan, Eric A. Hoffman
2007	B	`conf`	Segmentation of the optic nerve head combining pixel classification and graph search. Image Processing Michael B. Merickel, Michael D. Abràmoff, Milan Sonka, Xiaodong Wu
2007	J	`jnl`	The Layered Net Surface Problems in Discrete Geometry and Medical Image Segmentation. Int. J. Comput. Geom. Appl. Xiaodong Wu, Danny Z. Chen, Kang Li, Milan Sonka
2007	—	`conf`	Use of Varying Constraints in Optimal 3-D Graph Search for Segmentation of Macular Optical Coherence Tomography Images. MICCAI (1) Mona Haeker, Michael D. Abràmoff, Xiaodong Wu, Randy Kardon, Milan Sonka
2006	—	`ch.`	3D Active Shape and Appearance Models in Cardiac Image Analysis. Handbook of Mathematical Models in Computer Vision B. Legeveldt, Alejandro F. Frangi, Steven C. Mitchell, Hans C. van Assen, Sebastián Ordas, Johan H. C. Reiber, Milan Sonka
2006	A	`conf`	Automated 4D Segmentation of Aortic Magnetic Resonance Images. BMVC Fei Zhao, Honghai Zhang, Andreas Wahle, Thomas D. Scholz, Milan Sonka
2006	J	`jnl`	Automated contour detection in X-ray left ventricular angiograms using multiview active appearance models and dynamic programming. IEEE Trans. Medical Imaging Elco Oost, Gerhard Koning, Milan Sonka, Pranobe V. Oemrawsingh, Johan H. C. Reiber, Boudewijn P. F. Lelieveldt
2006	B	`conf`	Automatic segmentation of pulmonary fissures in x-ray CT images using anatomic guidance. Image Processing Soumik Ukil, Milan Sonka, Joseph M. Reinhardt
2006	—	`ed.`	Computer Vision Approaches to Medical Image Analysis, Second International ECCV Workshop, CVAMIA 2006, Graz, Austria, May 12, 2006 Revised Papers CVAMIA Reinhard Beichel, Milan Sonka
2006	B	`conf`	Computerized detection of pulmonary nodules using a combination of 3D global and local shape information based on helical CT images. Image Processing Xiangwei Zhang, Jonathan Stoeckel, Matthias Wolf, Pascal Cathier, Geoffrey McLennan, Eric A. Hoffman, Milan Sonka
2006	—	`conf`	Detection of Connective Tissue Disorders from 3D Aortic MR Images Using Independent Component Analysis. CVAMIA Michael Sass Hansen, Fei Zhao, Honghai Zhang, Nicholas E. Walker, Andreas Wahle, Thomas D. Scholz, Milan Sonka
2006	J	`jnl`	MDCT-based 3-D texture classification of emphysema and early smoking related lung pathologies. IEEE Trans. Medical Imaging Ye Xu, Milan Sonka, Geoffrey McLennan, Junfeng Guo, Eric A. Hoffman
2006	J	`jnl`	Optimal Surface Segmentation in Volumetric Images-A Graph-Theoretic Approach. IEEE Trans. Pattern Anal. Mach. Intell. Kang Li, Xiaodong Wu, Danny Z. Chen, Milan Sonka
2006	J	`jnl`	Plaque development, vessel curvature, and wall shear stress in coronary arteries assessed by X-ray angiography and intravascular ultrasound. Medical Image Anal. Andreas Wahle, John J. Lopez, Mark E. Olszewski, Sarah C. Vigmostad, Krishnan B. Chandran, James D. Rossen, Milan Sonka
2006	J	`jnl`	Quantitative analysis of pulmonary airway tree structures. Comput. Biol. Medicine Kálmán Palágyi, Juerg Tschirren, Eric A. Hoffman, Milan Sonka
2006	B	`conf`	Quantitative analysis of two-phase 3D+time aortic MR images. Image Processing Fei Zhao, Honghai Zhang, Nicholas E. Walker, Fuxing Yang, Mark E. Olszewski, Andreas Wahle, Thomas D. Scholz, Milan Sonka
2006	—	`conf`	Segmentation of the Surfaces of the Retinal Layer from OCT Images. MICCAI (1) Mona Haeker, Michael D. Abràmoff, Randy Kardon, Milan Sonka
2005	B	`conf`	3D segmentation of non-isolated pulmonary nodules in high resolution CT images. Image Processing Xiangwei Zhang, Geoffrey McLennan, Eric A. Hoffman, Milan Sonka
2005	—	`conf`	A Robust Matching Algorithm for Active Appearance Models. Bildverarbeitung für die Medizin Reinhard Beichel, Horst Bischof, Georg Langs, Milan Sonka
2005	B	`conf`	A complete CAD system for pulmonary nodule detection in high resolution CT images. Image Processing Xiangwei Zhang, Geoffrey McLennan, Eric A. Hoffman, Milan Sonka
2005	—	`conf`	Analysis of the Interdependencies Among Plaque Development, Vessel Curvature, and Wall Shear Stress in Coronary Arteries. FIMH Andreas Wahle, John J. Lopez, Mark E. Olszewski, Sarah C. Vigmostad, Krishnan B. Chandran, James D. Rossen, Milan Sonka
2005	—	`conf`	Automated Detection of Small-Size Pulmonary Nodules Based on Helical CT Images. IPMI Xiangwei Zhang, Geoffrey McLennan, Eric A. Hoffman, Milan Sonka
2005	—	`conf`	Automated Segmentation of X-ray Left Ventricular Angiograms Using Multi-View Active Appearance Models and Dynamic Programming. FIMH Elco Oost, Gerhard Koning, Milan Sonka, Johan H. C. Reiber, Boudewijn P. F. Lelieveldt
2005	A	`conf`	Cell Segmentation, Tracking, and Mitosis Detection Using Temporal Context. MICCAI Fuxing Yang, Michael A. Mackey, Fiorenza Ianzini, Greg Gallardo, Milan Sonka
2005	—	`ed.`	Information Processing in Medical Imaging, 19th International Conference, IPMI 2005, Glenwood Springs, CO, USA, July 10-15, 2005, Proceedings IPMI Gary E. Christensen, Milan Sonka
2005	J	`jnl`	Intrathoracic airway trees: segmentation and airway morphology analysis from low-dose CT scans. IEEE Trans. Medical Imaging Juerg Tschirren, Eric A. Hoffman, Geoffrey McLennan, Milan Sonka
2005	J	`jnl`	Matching and anatomical labeling of human airway tree. IEEE Trans. Medical Imaging Juerg Tschirren, Geoffrey McLennan, Kálmán Palágyi, Eric A. Hoffman, Milan Sonka
2005	B	`conf`	Multidimensional segmentation of coronary intravascular ultrasound images using knowledge-based methods. Image Processing Mark Eric Olszewski, Andreas Wahle, Sarah C. Vigmostad, Milan Sonka
2005	B	`conf`	Neural network and principal component analyses of highly variable myocardial mechanical waveforms derived from echocardiographic ultrasound images. IJCNN Eileen McMahon, Josef Korinek, Honghai Zhang, Milan Sonka, Armando Manduca, Marek Belohlavek
2005	—	`conf`	Robust Active Appearance Model Matching. IPMI Reinhard Beichel, Horst Bischof, Franz Leberl, Milan Sonka
2005	J	`jnl`	Robust active appearance models and their application to medical image analysis. IEEE Trans. Medical Imaging Reinhard Beichel, Horst Bischof, Franz Leberl, Milan Sonka
2005	—	`conf`	Simultaneous Segmentation of Multiple Closed Surfaces Using Optimal Graph Searching. IPMI Kang Li, Steven Millington, Xiaodong Wu, Danny Z. Chen, Milan Sonka
2005	B	`conf`	The Layered Net Surface Problems in Discrete Geometry and Medical Image Segmentation. ISAAC Xiaodong Wu, Danny Z. Chen, Kang Li, Milan Sonka
2004	—	`conf`	Assessment of Intrathoracic Airway Trees: Methods and In Vivo Validation. ECCV Workshops CVAMIA and MMBIA Kálmán Palágyi, Juerg Tschirren, Eric A. Hoffman, Milan Sonka
2004	—	`ed.`	Computer Vision and Mathematical Methods in Medical and Biomedical Image Analysis, ECCV 2004 Workshops CVAMIA and MMBIA, Prague, Czech Republic, May 15, 2004, Revised Selected Papers ECCV Workshops CVAMIA and MMBIA Milan Sonka, Ioannis A. Kakadiaris, Jan Kybic
2004	B	`conf`	Computerized detection of pulmonary nodules using cellular neural networks in CT images. Image Processing Xiangwei Zhang, Geoffrey McLennan, Eric A. Hoffman, Milan Sonka
2004	B	`conf`	Curvature estimation of arbitrary discrete 3D surfaces using partial derivatives based on distance maps. Image Processing Xiangwei Zhang, Milan Sonka
2004	B	`conf`	Efficient optimal surface detection: theory, implementation, and experimental validation. Image Processing Kang Li, Xiaodong Wu, Zhixiang Chen, Milan Sonka
2004	—	`conf`	Globally Optimal Segmentation of Interacting Surfaces with Geometric Constraints. CVPR (1) Kang Li, Xiaodong Wu, Danny Z. Chen, Milan Sonka
2004	J	`jnl`	Interactive virtual endoscopy in coronary arteries based on multimodality fusion. IEEE Trans. Medical Imaging Andreas Wahle, Mark E. Olszewski, Milan Sonka
2004	B	`conf`	Liver segment approximation in CT data for surgical resection planning. Image Processing Reinhard Beichel, Thomas Pock, Christian Janko, Roman B. Zotter, Bernhard Reitinger, Alexander Bornik, Kálmán Palágyi, Erich Sorantin, Georg Werkgartner, Horst Bischof, Milan Sonka
2004	B	`ed.`	Medical Imaging 2004: Image Processing, San Diego, California, United States, 14-19 February 2004 Image Processing J. Michael Fitzpatrick, Milan Sonka
2004	—	`conf`	Mitotic cell recognition with hidden Markov models. Image-Guided Procedures Greg M. Gallardo, Fuxing Yang, Fiorenza Ianzini, Michael A. Mackey, Milan Sonka
2004	—	`conf`	Quantitative Analysis of Circumferential Plaque Distribution in Human Coronary Arteries in Relation to Local Vessel Curvature. ISBI Andreas Wahle, Mark E. Olszewski, Sarah C. Vigmostad, Rubén Medina, A. Ümit Coskun, Charles L. Feldman, Peter H. Stone, Kathleen Braddy, Theresa Brennan, James D. Rossen, Krishnan B. Chandran, Milan Sonka
2004	—	`conf`	Real-time three-dimensional digital Doppler method based on Gaussian control surface for measurement of flow volumes. CARS Honghai Zhang, Liping Bu, Alan Stolpen, Milan Sonka, Shuping Ge
2004	B	`conf`	Segmentation and quantitative analysis of the living tumor cells using large-scale digital cell analysis system. Image Processing Fuxing Yang, Michael A. Mackey, Fiorenza Ianzini, Greg M. Gallardo, Milan Sonka
2004	—	`conf`	Segmentation of intravascular ultrasound images: a machine learning approach mimicking human vision. CARS Mark E. Olszewski, Andreas Wahle, Steven C. Mitchell, Milan Sonka
2003	B	`conf`	Automated classification of wall motion abnormalities by principal component analysis of endocardial shape motion patterns in echocardiograms. Image Processing Johan G. Bosch, Francisca Nijland, Steven C. Mitchell, Boudewijn P. F. Lelieveldt, Otto Kamp, Milan Sonka, Johan H. C. Reiber
2003	—	`conf`	Computer Aided Liver Surgery Planning Based on Augmented Reality Techniques. Bildverarbeitung für die Medizin Alexander Bornik, Reinhard Beichel, Bernhard Reitinger, Georg Gotschuli, Erich Sorantin, Franz Leberl, Milan Sonka
2003	—	`conf`	Computer-aided diagnosis via model-based shape analysis: cardiac. CARS Milan Sonka, Johan G. Bosch, Boudewijn P. F. Lelieveldt, Steven C. Mitchell, Johan H. C. Reiber
2003	—	`conf`	Computer-aided liver surgery planning: an augmented reality approach. Image-Guided Procedures Alexander Bornik, Reinhard Beichel, Bernhard Reitinger, Georg Gotschuli, Erich Sorantin, Franz Leberl, Milan Sonka
2003	B	`conf`	Disease characterization of active appearance model coefficients. Image Processing Steven C. Mitchell, Boudewijn P. F. Lelieveldt, Hans G. Bosch, Johan H. C. Reiber, Milan Sonka
2003	J	`jnl`	Editorial. EURASIP J. Adv. Signal Process. Jirí Jan, Milan Sonka, Ivo Provazník
2003	J	`jnl`	Effects of vessel geometry and catheter position on dose delivery in intracoronary brachytherapy. IEEE Trans. Biomed. Eng. Andreas Wahle, John J. Lopez, Edward C. Pennington, Sanford L. Meeks, Kathleen Braddy, James M. Fox, Theresa Brennan, John M. Buatti, James D. Rossen, Milan Sonka
2003	—	`conf`	Estimating the actual dose delivered by intravascular coronary brachytherapy using geometrically correct 3D modeling. Image-Guided Procedures Andreas Wahle, John J. Lopez, Edward C. Pennington, Sanford L. Meeks, Kathleen C. Braddy, James M. Fox, Theresa M. H. Brennan, John M. Buatti, James D. Rossen, Milan Sonka
2003	—	`conf`	ICA vs. PCA Active Appearance Models: Application to Cardiac MR Segmentation. MICCAI (1) Mehmet Üzümcü, Alejandro F. Frangi, Milan Sonka, Johan H. C. Reiber, Boudewijn P. F. Lelieveldt
2003	—	`conf`	Integrated system for quantitative analysis of coronary plaque via data fusion of biplane angiography and intravascular ultrasound. CARS Mark E. Olszewski, Andreas Wahle, Rubén Medina, Steven C. Mitchell, Milan Sonka
2003	B	`conf`	Left ventricle contour detection in x-ray angiograms using multi-view active appearance models. Image Processing Elco Oost, Boudewijn P. F. Lelieveldt, Gerhard Koning, Milan Sonka, Johan H. C. Reiber
2003	B	`ed.`	Medical Imaging 2003: Image Processing, San Diego, California, United States, 15-20 February 2003 Image Processing Milan Sonka, J. Michael Fitzpatrick
2003	—	`conf`	Multi-view Active Appearance Models: Application to X-Ray LV Angiography and Cardiac MRI. IPMI C. R. Oost, Boudewijn P. F. Lelieveldt, Mehmet Üzümcü, Hildo J. Lamb, Johan H. C. Reiber, Milan Sonka
2003	—	`conf`	Multi-view active appearance models for consistent segmentation of multiple standard views: application to long and short-axis cardiac MR images. CARS Boudewijn P. F. Lelieveldt, Mehmet Üzümcü, Rob J. van der Geest, Johan H. C. Reiber, Milan Sonka
2003	—	`conf`	Quantitative Analysis of Intrathoracic Airway Trees: Methods and Validation. IPMI Kálmán Palágyi, Juerg Tschirren, Milan Sonka
2003	B	`conf`	Quantitative analysis of three-dimensional tubular tree structures. Image Processing Kálmán Palágyi, Juerg Tschirren, Milan Sonka
2003	B	`conf`	Vascular MR segmentation: wall and plaque. Image Processing Fuxing Yang, Gerhard A. Holzapfel, Christian Schulze-Bauer, Rudolf Stollberger, Daniel Thedens, Lizann Bolinger, Alan Stolpen, Milan Sonka
2002	J	`jnl`	3-D Active Appearance Models: Segmentation of Cardiac MR and Ultrasound Images. IEEE Trans. Medical Imaging Steven C. Mitchell, Johan G. Bosch, Boudewijn P. F. Lelieveldt, Rob J. van der Geest, Johan H. C. Reiber, Milan Sonka
2002	—	`conf`	Assessment of plaque stability by means of high-resolution MRI and finite element analyses of local stresses and strains. ISBI Christian Schulze-Bauer, M. Auer, Rudolf Stollberger, Peter Regitnig, Milan Sonka, Gerhard A. Holzapfel
2002	J	`jnl`	Automated Analysis of Brachial Ultrasound Image Sequences: Early Detection of Cardiovascular Disease via Surrogates of Endothelial Function. IEEE Trans. Medical Imaging Milan Sonka, Weidong Liang, Ronald M. Lauer
2002	—	`conf`	Automated Nomenclature Labeling of the Bronchial Tree in 3D-CT Lung Images. MICCAI (2) Hiroko Kitaoka, Yongsup Park, Juerg Tschirren, Joseph M. Reinhardt, Milan Sonka, Geoffrey McLennan, Eric A. Hoffman
2002	J	`jnl`	Automatic Segmentation of Echocardiographic Sequences by Active Appearance Motion Models. IEEE Trans. Medical Imaging Johan G. Bosch, Steven C. Mitchell, Boudewijn P. F. Lelieveldt, Francisca Nijland, Otto Kamp, Milan Sonka, Johan H. C. Reiber
2002	B	`conf`	Diaphragm dome surface segmentation in CT data sets: a 3D active appearance model approach. Image Processing Reinhard Beichel, Georg Gotschuli, Erich Sorantin, Franz W. Leberl, Milan Sonka
2002	B	`conf`	Fully automated endocardial contour detection in time sequences of echocardiograms by three-dimensional active appearance models. Image Processing Johan G. Bosch, Steven C. Mitchell, Boudewijn P. F. Lelieveldt, Francisca Nijland, Otto Kamp, Milan Sonka, Johan H. C. Reiber
2002	J	`jnl`	Image Processing and Analysis in Drug Discovery and Clinical Trials. IEEE Trans. Medical Imaging Milan Sonka, Michael Grunkin
2002	—	`conf`	Integrated system for CT-based assessment of parenchymal lung disease. ISBI Junfeng Guo, Joseph M. Reinhardt, Hiroko Kitaoka, Li Zhang, Milan Sonka, Geoffrey McLennan, Eric A. Hoffman
2002	B	`ed.`	Medical Imaging 2002: Image Processing, San Diego, California, United States, 23-28 February 2002 Image Processing Milan Sonka, J. Michael Fitzpatrick
2002	B	`conf`	Segmentation of cardiac MR volume data using 3D active appearance models. Image Processing Steven C. Mitchell, Boudewijn P. F. Lelieveldt, Johan G. Bosch, Rob J. van der Geest, Johan H. C. Reiber, Milan Sonka
2002	—	`conf`	Segmentation, Skeletonization, and Branchpoint Matching - A Fully Automated Quantitative Evaluation of Human Intrathoracic Airway Trees. MICCAI (2) Juerg Tschirren, Kálmán Palágyi, Joseph M. Reinhardt, Eric A. Hoffman, Milan Sonka
2002	—	`conf`	Volumetric quantification of coronary arteries reconstructed by fusion between intravascular ultrasound and biplane angiography. ISBI Rubén Medina, Andreas Wahle, Mark E. Olszewski, Milan Sonka
2001	—	`conf`	Active Appearance - Motion Models for fully automated endocardial contour detection in time sequences of echocardiograms. CARS Hans G. Bosch, Steven C. Mitchell, Boudewijn P. F. Lelieveldt, Francisca Nijland, Otto Kamp, Milan Sonka, Johan H. C. Reiber
2001	—	`conf`	Active Appearance Motion Model Segmentation. Workshop on Digital and Computational Video Milan Sonka, Steven C. Mitchell, Boudewijn P. F. Lelieveldt, Johan G. Bosch, Rob J. van der Geest, Johan H. C. Reiber
2001	B	`conf`	Active appearance motion models for endocardial contour detection in time sequences of echocardiograms. Image Processing Hans G. Bosch, Steven C. Mitchell, Boudewijn P. F. Lelieveldt, Francisca Nijland, Otto Kamp, Milan Sonka, Johan H. C. Reiber
2001	J	`jnl`	Automated Analysis of Doppler Ultrasound Velocity Flow Diagrams. IEEE Trans. Medical Imaging Juerg Tschirren, Ronald M. Lauer, Milan Sonka
2001	—	`conf`	Cardiovascular image analysis: past, present and future. CARS Milan Sonka
2001	B	`conf`	Four-dimensional coronary morphology and computational hemodynamics. Image Processing Andreas Wahle, Steven C. Mitchell, Sharan D. Ramaswamy, Krishnan B. Chandran, Milan Sonka
2001	J	`jnl`	Handbook of Medical Imaging - Processing and Analysis I.N.. IEEE Trans. Medical Imaging Milan Sonka, J. Michael Fitzpatrick
2001	A	`conf`	Integrated System for Objective Assessment of Global and Regional Lung Structure. MICCAI Joseph M. Reinhardt, Junfeng Guo, Li Zhang, D. Bilgen, Shiying Hu, R. Uppaluri, Ryan M. Long, O. I. Saba, Geoffrey McLennan, Milan Sonka, Eric A. Hoffman
2001	B	`ed.`	Medical Imaging 2001: Image Processing, San Diego, CA, United States, 17-22 February 2001 Image Processing Milan Sonka, Kenneth M. Hanson
2001	J	`jnl`	Multistage Hybrid Active Appearance Model Matching: Segmentation of Left and Right Ventricles in Cardiac MR Images. IEEE Trans. Medical Imaging Steven C. Mitchell, Boudewijn P. F. Lelieveldt, Rob J. van der Geest, Johan G. Bosch, Johan H. C. Reiber, Milan Sonka
2001	—	`conf`	Shape- and appearance-based segmentation of volumetric medical images. ICIP (2) Reinhard Beichel, Steven C. Mitchell, Erich Sorantin, Franz Leberl, A. Ardeshir Goshtasby, Milan Sonka
2001	—	`conf`	Time continuous segmentation of cardiac MR images using Active Appearance Motion Models. CARS Boudewijn P. F. Lelieveldt, Steven C. Mitchell, Rob J. van der Geest, Hans G. Bosch, Milan Sonka, Johan H. C. Reiber
2001	—	`conf`	Time-Continuous Segmentation of Cardiac Image Sequences Using Active Appearance Motion Models. IPMI Boudewijn P. F. Lelieveldt, Steven C. Mitchell, Johan G. Bosch, Rob J. van der Geest, Milan Sonka, Johan H. C. Reiber
2001	B	`conf`	Time-continuous segmentation of cardiac MR image sequences using active appearance motion models. Image Processing Steven C. Mitchell, Boudewijn P. F. Lelieveldt, Rob J. van der Geest, Hans G. Bosch, Johan H. C. Reiber, Milan Sonka
2001	—	`conf`	Visualization of human coronary arteries with quantification results from 3-D and 4-D computational hemodynamics based upon virtual endoscopy. CARS Andreas Wahle, Steven C. Mitchell, Sharan D. Ramaswamy, Krishnan B. Chandran, Milan Sonka
2000	J	`jnl`	Analysis of Volumetric Images. Comput. Vis. Image Underst. A. Ardeshir Goshtasby, Milan Sonka, Jayaram K. Udupa
2000	J	`jnl`	Anatomical Modeling with Fuzzy Implicit Surface Templates: Application to Automated Localization of the Heart and Lungs in Thoracic MR Volumes. Comput. Vis. Image Underst. Boudewijn P. F. Lelieveldt, Milan Sonka, Lizann Bolinger, Thomas D. Scholz, Hein W. M. Kayser, Rob J. van der Geest, Johan H. C. Reiber
2000	—	`conf`	Automated Initialization and Automated Design of Border Detection Criteria in Edge-Based Image Segmentation. SSIAI Marek Brejl, Milan Sonka
2000	B	`conf`	Determination of the envelope function (maximum velocity curve) in Doppler ultrasound flow velocity diagrams. Image Processing Juerg Tschirren, Ronald M. Lauer, Milan Sonka
2000	J	`jnl`	Directional 3D Edge Detection in Anisotropic Data: Detector Design and Performance Assessment. Comput. Vis. Image Underst. Marek Brejl, Milan Sonka
2000	J	`jnl`	Object Localization and Border Detection Criteria Design in Edge-Based Image Segmentation: Automated Learning from Examples. IEEE Trans. Medical Imaging Marek Brejl, Milan Sonka
2000	—	`conf`	Quantitative Measurements in Geometrically Correct Representations of Coronary Vessels in 3-D and 4-D. SSIAI Mark E. Olszewski, Ryan M. Long, Steven C. Mitchell, Andreas Wahle, Milan Sonka
2000	B	`conf`	Segmentation of cardiac MR images: an active appearance model approach. Image Processing Steven C. Mitchell, Boudewijn P. F. Lelieveldt, Rob J. van der Geest, Jorrit A. Schaap, Johan H. C. Reiber, Milan Sonka
1999	—	`conf`	Anatomical Modeling with Fuzzy Implicit Surfaces: Application to Automated Localization of the Heart and Lungs in Thoracic MR Images. IPMI Boudewijn P. F. Lelieveldt, Milan Sonka, Lizann Bolinger, Thomas D. Scholz, Hein W. M. Kayser, Rob J. van der Geest, Johan H. C. Reiber
1999	B	`conf`	Automated calculation of the axial orientation of intravascular ultrasound images by fusion with biplane angiography. Image Processing Andreas Wahle, Guido P. M. Prause, Clemens von Birgelen, Raimund Erbel, Milan Sonka
1999	J	`jnl`	Fusion of angiography and intravascular ultrasound in vivo: establishing the absolute 3-D frame orientation. IEEE Trans. Biomed. Eng. Andreas Wahle, Guido P. M. Prause, Clemens von Birgelen, Raimund Erbel, Milan Sonka
1999	J	`jnl`	Geometrically Correct 3-D Reconstruction of Intravascular Ultrasound Images by Fusion with Biplane Angiography - Methods and Validation. IEEE Trans. Medical Imaging Andreas Wahle, Guido P. M. Prause, Steven C. DeJong, Milan Sonka
1999	—	`conf`	Learning Shape Models from Examples Using Automatic Shape Clustering and Procrustes Analysis. IPMI Nicolae Duta, Milan Sonka, Anil K. Jain
1999	J	`jnl`	Medical image segmentation: Automated design of border detection criteria from examples. J. Electronic Imaging Marek Brejl, Milan Sonka
1998	A	`conf`	3-D Fusion of Biplane Angiography and Intravascular Ultrasound for Accurate Visualization and Volumetry. MICCAI Andreas Wahle, Guido P. M. Prause, Steven C. DeJong, Milan Sonka
1998	B	`conf`	3D catheter path reconstruction from biplane angiograms. Image Processing M. Carmen Molina, Guido P. M. Prause, Petia Radeva, Milan Sonka
1998	B	`conf`	Automated follicle analysis in ovarian ultrasound. Image Processing Anthony Krivanek, Weidong Liang, Gordon E. Sarty, Roger A. Pierson, Milan Sonka
1998	J	`jnl`	Ovarian Ultrasound Image Analysis: Follicle Segmentation . IEEE Trans. Medical Imaging Anthony Krivanek, Milan Sonka
1998	J	`jnl`	Segmentation and Interpretation of MR Brain Images: An Improved Active Shape Model. IEEE Trans. Medical Imaging Nicolae Duta, Milan Sonka
1998	J	`jnl`	Segmentation of Intrathoracic Airway Trees: A Fuzzy Logic Approach. IEEE Trans. Medical Imaging Wonkyu Park, Eric A. Hoffman, Milan Sonka
1998	B	`conf`	Teaching digital image processing and computer vision in a quantitative imaging electronic classroom. Image Processing Milan Sonka
1998	J	`jnl`	Tissue Characterization in Intravascular Ultrasound Images. IEEE Trans. Medical Imaging Xiangmin Zhang, Charles R. McKay, Milan Sonka
1997	J	`jnl`	Adaptive Approach to Accurate Analysis of Small-Diameter Vessels in Cineangiograms. IEEE Trans. Medical Imaging Milan Sonka, G. K. Reddy, Michael D. Winniford, Steve M. Collins
1997	—	`conf`	An Improved Active Shape Model: Handling Occlusion and Outliers. ICIAP (1) Nicolae Duta, Milan Sonka
1997	—	`conf`	Local Three-Dimensional Shape-Preserving Smoothing without Shrinkage. ICIP (1) Chaohuang Zeng, Milan Sonka
1997	—	`conf`	Segmentation and Interpretation of MR Brain Images Using an Improved Knowledge-Based Active Shape Model. IPMI Nicolae Duta, Milan Sonka
1996	J	`jnl`	A Fully Parallel 3D Thinning Algorithm and Its Applications. Comput. Vis. Image Underst. C. Min Ma, Milan Sonka
1996	B	`conf`	Fuzzy logic approach to extraction of intrathoracic airway trees from three-dimensional CT images. Image Processing Wonkyu Park, Eric A. Hoffman, Milan Sonka
1996	J	`jnl`	Knowledge-based interpretation of MR brain images. IEEE Trans. Medical Imaging Milan Sonka, Satish K. Tadikonda, Steve M. Collins
1996	J	`jnl`	Rule-based detection of intrathoracic airway trees. IEEE Trans. Medical Imaging Milan Sonka, Wonkyu Park, Eric A. Hoffman
1995	—	`book`	Image processing, analysis and machine vision. Milan Sonka, Václav Hlavác, Roger Boyle
1995	J	`jnl`	Robust simultaneous detection of coronary borders in complex images. IEEE Trans. Medical Imaging Milan Sonka, Michael D. Winniford, Steve M. Collins
1995	J	`jnl`	Segmentation of intravascular ultrasound images: a knowledge-based approach. IEEE Trans. Medical Imaging Milan Sonka, Xiangmin Zhang, Maria Siebes, Mark S. Bissing, Steven C. DeJong, Steve M. Collins, Charles R. McKay
1995	—	`conf`	Tree pruning strategy in automated detection of coronary trees in cineangiograms. ICIP (3) Xiangmin Zhang, Steve M. Collins, Milan Sonka
1994	J	`jnl`	Lumen centerline detection in complex coronary angiograms. IEEE Trans. Biomed. Eng. Milan Sonka, Michael D. Winniford, Xiangmin Zhang, Steve M. Collins
1993	J	`jnl`	Simultaneous detection of both coronary borders. IEEE Trans. Medical Imaging Milan Sonka, Christopher J. Wilbricht, Steven R. Fleagle, Satish K. Tadikonda, Michael D. Winniford, Steve M. Collins
1989	—	`conf`	Cognitive Robot Education and Image Processing Research at the Czech Technical University of Prague. Artificial Intelligence in Higher Education Milan Sonka