Michal Marczyk

38 papers C 1Misc 4Journal 18Unranked 14
YearRankTypeTitle / Venue / Authors
2026 — conf
HistoKit: Fast and Accurate Tissue and Artifact Detection and Data Processing for Whole Slide Histopathological Imaging.
BIOSTEC (2)
Julia Merta, Michal Marczyk
2026 — conf
Kit-Specific and Other Non-Biological-Based Biases in Germline Whole-Exome Analysis at the Gene Level.
BIOSTEC (2)
Laura Jarosz, Jiawei Dai, Marcel Ochocki, Julia Merta, Lajos Pusztai, Michal Marczyk
2026 J jnl
dpGMM: A new R package for efficient and robust Gaussian mixture modeling of 1D and 2D data.
J. Comput. Sci.
Joanna Zyla, Kamila Szumala, Andrzej Polanski, Joanna Polanska, Michal Marczyk
2025 — conf
Assessing the Influence of scRNA-Seq Data Normalization on Dimensionality Reduction Outcomes.
BIOSTEC (1)
Marcel Ochocki, Michal Marczyk, Joanna Zyla
2025 J jnl
GRAP-MOT: Unsupervised Graph-based Position Weighted Person Multi-camera Multi-object Tracking in a Highly Congested Space.
CoRR
Marek Socha, Michal Marczyk, Aleksander Kempski, Michal Cogiel, Pawel Foszner, Radoslaw Zawiski, Michal Staniszewski
2025 — conf
Post-Processing of Thresholding or Deep Learning Methods for Enhanced Tissue Segmentation of Whole-Slide Histopathological Images.
BIOSTEC (1)
Michal Marczyk, Agata Wróbel, Julia Merta, Joanna Polanska
2025 — conf
Towards Development of Natural Language Processing Model to Support Infertility Treatment Planning in Poland.
IWBBIO (1)
Dawid Zamojski, Adam Pudelko, Alicja Gajewska-Kucharek, Michal Marczyk
2024 J jnl
EpidermaQuant: Unsupervised detection and quantification of epidermal differentiation markers on H-DAB-stained images of reconstructed human epidermis.
CoRR
Dawid Zamojski, Agnieszka Gogler, Dorota Scieglinska, Michal Marczyk
2024 J jnl
Passenger Location Estimation in Public Transport: Evaluating Methods and Camera Placement Impact.
IEEE Trans. Intell. Transp. Syst.
Michal Marczyk, Aleksander Kempski, Marek Socha, Michal Cogiel, Pawel Foszner, Michal Staniszewski
2023 J jnl
BRONCO: Automated modelling of the bronchovascular bundle using the Computed Tomography Images.
CoRR
Wojciech Prazuch, Marek Socha, Anna Mrukwa, Aleksandra Suwalska, Agata Durawa, Malgorzata Jelitto-Górska, Katarzyna Dziadziuszko, Edyta Szurowska, Pawel Bozek, Michal Marczyk, Witold Rzyman, Joanna Polanska
2023 J jnl
Combining low-dose CT-based radiomics and metabolomics for early lung cancer screening support.
CoRR
Joanna Zyla, Michal Marczyk, Wojciech Prazuch, Marek Socha, Aleksandra Suwalska, Agata Durawa, Malgorzata Jelitto-Górska, Katarzyna Dziadziuszko, Edyta Szurowska, Witold Rzyman, Piotr Widlak, Joanna Polanska
2023 J jnl
Pathological changes or technical artefacts? The problem of the heterogenous databases in COVID-19 CXR image analysis.
Comput. Methods Programs Biomed.
Marek Socha, Wojciech Prazuch, Aleksandra Suwalska, Pawel Foszner, Joanna Tobiasz, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Mateusz Nowak, Barbara Gizycka, Gabriela Zapolska, Tadeusz Popiela, Grzegorz Przybylski, Piotr Fiedor, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Jerzy Walecki, Andrzej Cieszanowski, Edyta Szurowska, Michal Marczyk, Joanna Polanska
2022 J jnl
CIRCA: comprehensible online system in support of chest X-rays-based COVID-19 diagnosis.
CoRR
Wojciech Prazuch, Aleksandra Suwalska, Marek Socha, Joanna Tobiasz, Pawel Foszner, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Jerzy Walecki, Tadeusz Popiela, Grzegorz Przybylski, Andrzej Cieszanowski, Mateusz Nowak, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Gabriela Zapolska, Barbara Gizycka, Edyta Szurowska, Michal Marczyk, Joanna Polanska
2022 — conf
Finding Significantly Enriched Cells in Single-Cell RNA Sequencing by Single-Sample Approaches.
IWBBIO (2)
Anna Mrukwa, Michal Marczyk, Joanna Zyla
2022 — conf
Investigating Sources of Zeros in 10× Single-Cell RNAseq Data.
IWBBIO (2)
Hanna Slowik, Joanna Zyla, Michal Marczyk
2022 J jnl
POLCOVID: a multicenter multiclass chest X-ray database (Poland, 2020-2021).
CoRR
Aleksandra Suwalska, Joanna Tobiasz, Wojciech Prazuch, Marek Socha, Pawel Foszner, Jerzy Jaroszewicz, Katarzyna Gruszczynska, Magdalena Sliwinska, Jerzy Walecki, Tadeusz Popiela, Grzegorz Przybylski, Mateusz Nowak, Piotr Fiedor, Malgorzata Pawlowska, Robert Flisiak, Krzysztof Simon, Gabriela Zapolska, Barbara Gizycka, Edyta Szurowska, Michal Marczyk, Andrzej Cieszanowski, Joanna Polanska
2021 C conf
Autoencoder-based bone removal algorithm from x-ray images of the lung.
BIBE
Seweryn Kalisz, Michal Marczyk
2020 J jnl
GaMRed - Adaptive Filtering of High-Throughput Biological Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Michal Marczyk, Roman Jaksik, Andrzej Polanski, Joanna Polanska
2019 J jnl
BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm.
Bioinform.
Anna Papiez, Michal Marczyk, Joanna Polanska, Andrzej Polanski
2019 J jnl
Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms.
Bioinform.
Joanna Zyla, Michal Marczyk, Teresa Domaszewska, Stefan H. E. Kaufmann, Joanna Polanska, January 3rd Weiner
2017 — conf
Improving peak detection by Gaussian mixture modeling of mass spectral signal.
ICFSP
Michal Marczyk, Joanna Polanska, Andrzej Polanski
2017 Misc conf
Processing 2D Gel Electrophoresis Images for Efficient Gaussian Mixture Modeling.
PACBB
Michal Marczyk
2017 J jnl
Ranking metrics in gene set enrichment analysis: do they matter?
BMC Bioinform.
Joanna Zyla, Michal Marczyk, January 3rd Weiner, Joanna Polanska
2017 Misc conf
Reproducibility of Finding Enriched Gene Sets in Biological Data Analysis.
PACBB
Joanna Zyla, Michal Marczyk, Joanna Polanska
2016 — conf
Improved Detection of 2D Gel Electrophoresis Spots by Using Gaussian Mixture Model.
ISBRA
Michal Marczyk
2016 Misc conf
Sensitivity, Specificity and Prioritization of Gene Set Analysis When Applying Different Ranking Metrics.
PACBB
Joanna Zyla, Michal Marczyk, Joanna Polanska
2015 — conf
Mixture Model Based Efficient Method for Magnetic Resonance Spectra Quantification.
IWBBIO (2)
Franciszek Binczyk, Michal Marczyk, Joanna Polanska
2015 Misc conf
Modeling of Imaging Mass Spectrometry Data and Testing by Permutation for Biomarkers Discovery in Tissues.
ICCS
Michal Marczyk, Grzegorz Drazek, Monika Pietrowska, Piotr Widlak, Joanna Polanska, Andrzej Polanski
2014 — ch.
A Note on Strong Causal Closedness and Completability of Classical Probability Spaces.
New Directions in the Philosophy of Science
Michal Marczyk, Leszek Wronski
2014 J jnl
An Efficient Algorithm for Microarray Probes Re-annotation.
Trans. Comput. Collect. Intell.
Pawel Foszner, Aleksandra Gruca, Andrzej Polanski, Michal Marczyk, Roman Jaksik, Joanna Polanska
2014 — conf
Automatic detection of outlying microarrays using multi-array quality metrics.
IWBBIO
Michal Marczyk, Lukasz Krol, Joanna Polanska
2014 — conf
Methods for Quality Control of Low-resolution MALDI-ToF Spectra.
BIOINFORMATICS
Michal Marczyk, Joanna Polanska
2014 J jnl
Sources of High Variance between Probe Signals in Affymetrix Short Oligonucleotide Microarrays.
Sensors
Roman Jaksik, Michal Marczyk, Joanna Polanska, Joanna Rzeszowska-Wolny
2013 J jnl
Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition.
BMC Bioinform.
Michal Marczyk, Roman Jaksik, Andrzej Polanski, Joanna Polanska
2013 — conf
Comparison of Algorithms for Profile-Based Alignment of Low Resolution MALDI-ToF Spectra.
ICMMI
Michal Marczyk, Joanna Polanska, Andrzej Polanski
2011 — conf
Efficient Algorithm for Microarray Probes Re-annotation.
ICCCI (2)
Pawel Foszner, Aleksandra Gruca, Andrzej Polanski, Michal Marczyk, Roman Jaksik, Joanna Polanska
2011 J jnl
Evaluation of available protein mass spectra pre-processing algorithms.
Bio Algorithms Med Syst.
Michal Marczyk
2010 J jnl
Evaluation of available protein mass spectra pre-processing algorithms.
Bio Algorithms Med Syst.
Michal Marczyk