Michael Schroeder

150 papers A* 1A 3B 6C 6Misc 2Journal 71Unranked 51

Year	Rank	Type	Title / Venue / Authors
2023	J	`jnl`	Netrank: network-based approach for biomarker discovery. BMC Bioinform. Ali H. Al-Fatlawi, Eka Rusadze, Alexander Shmelkin, Negin Malekian, Cigdem Ozen, Christian Pilarsky, Michael Schroeder
2022	J	`jnl`	Decomposing compounds enables reconstruction of interaction fingerprints for structure-based drug screening. J. Cheminformatics Melissa F. Adasme, Sarah Naomi Bolz, Ali H. Al-Fatlawi, Michael Schroeder
2022	J	`jnl`	Emati: a recommender system for biomedical literature based on supervised learning. Database J. Biol. Databases Curation Özge Kart, Alexandre Mestiashvili, Kurt Lachmann, Richard Kwasnicki, Michael Schroeder
2022	J	`jnl`	Measuring Group Separability in Geometrical Space for Evaluation of Pattern Recognition and Dimension Reduction Algorithms. IEEE Access Aldo Acevedo, Claudio Durán, Ming-Ju Kuo, Sara Ciucci, Michael Schroeder, Carlo Vittorio Cannistraci
2022	J	`jnl`	NetRank Recovers Known Cancer Hallmark Genes as Universal Biomarker Signature for Cancer Outcome Prediction. Frontiers Bioinform. Ali H. Al-Fatlawi, Nazia Afrin, Cigdem Ozen, Negin Malekian, Michael Schroeder
2021	J	`jnl`	PLIP 2021: expanding the scope of the protein-ligand interaction profiler to DNA and RNA. Nucleic Acids Res. Melissa F. Adasme, Katja L. Linnemann, Sarah Naomi Bolz, Florian Kaiser, Sebastian Salentin, V. Joachim Haupt, Michael Schroeder
2021	J	`jnl`	Toward an Understanding of Pan-Assay Interference Compounds and Promiscuity: A Structural Perspective on Binding Modes. J. Chem. Inf. Model. Sarah Naomi Bolz, Melissa F. Adasme, Michael Schroeder
2019	J	`jnl`	UniLectin3D, a database of carbohydrate binding proteins with curated information on 3D structures and interacting ligands. Nucleic Acids Res. François Bonnardel, Julien Mariethoz, Sebastian Salentin, Xavier Robin, Michael Schroeder, Serge Pérez, Frédérique Lisacek, Anne Imberty
2018	J	`jnl`	Backbone Brackets and Arginine Tweezers delineate Class I and Class II aminoacyl tRNA synthetases. PLoS Comput. Biol. Florian Kaiser, Sebastian Bittrich, Sebastian Salentin, Christoph Leberecht, V. Joachim Haupt, Sarah Krautwurst, Michael Schroeder, Dirk Labudde
2018	J	`jnl`	Pioneering topological methods for network-based drug-target prediction by exploiting a brain-network self-organization theory. Briefings Bioinform. Claudio Durán, Simone Daminelli, Josephine Maria Thomas, V. Joachim Haupt, Michael Schroeder, Carlo Vittorio Cannistraci
2017	J	`jnl`	MAGPIE: Simplifying access and execution of computational models in the life sciences. PLoS Comput. Biol. Christoph Baldow, Sebastian Salentin, Michael Schroeder, Ingo Roeder, Ingmar Glauche
2015	J	`jnl`	An overview of the BIOASQ large-scale biomedical semantic indexing and question answering competition. BMC Bioinform. George Tsatsaronis, Georgios Balikas, Prodromos Malakasiotis, Ioannis Partalas, Matthias Zschunke, Michael R. Alvers, Dirk Weissenborn, Anastasia Krithara, Sergios Petridis, Dimitris Polychronopoulos, Yannis Almirantis, John Pavlopoulos, Nicolas Baskiotis, Patrick Gallinari, Thierry Artières, Axel-Cyrille Ngonga Ngomo, Norman Heino, Éric Gaussier, Liliana Barrio-Alvers, Michael Schroeder, Ion Androutsopoulos, Georgios Paliouras
2015	J	`jnl`	Discovering relations between indirectly connected biomedical concepts. J. Biomed. Semant. Dirk Weissenborn, Michael Schroeder, George Tsatsaronis
2015	J	`jnl`	Formalizing biomedical concepts from textual definitions. J. Biomed. Semant. Alina Petrova, Yue Ma, George Tsatsaronis, Maria Kissa, Felix Distel, Franz Baader, Michael Schroeder
2015	J	`jnl`	PLIP: fully automated protein-ligand interaction profiler. Nucleic Acids Res. Sebastian Salentin, Sven Schreiber, V. Joachim Haupt, Melissa F. Adasme, Michael Schroeder
2014	—	`conf`	Developing Semantic Search for the Patent Domain. IPaMin@KONVENS Daniel Eisinger, Jan Mönnich, Michael Schroeder
2014	—	`conf`	Discovering Relations between Indirectly Connected Biomedical Concepts. DILS Dirk Weissenborn, Michael Schroeder, George Tsatsaronis
2014	—	`ch.`	GeneCloud: Secure Cloud Computing for Biomedical Research. Trusted Cloud Computing Martin Beck, V. Joachim Haupt, Janine Roy, Jan Mönnich, René Jäkel, Michael Schroeder, Zerrin Isik
2014	J	`jnl`	Network information improves cancer outcome prediction. Briefings Bioinform. Janine Roy, Christof Winter, Zerrin Isik, Michael Schroeder
2014	—	`ch.`	Privacy-Preserving Cloud Computing for Biomedical Research. Trusted Cloud Computing Martin Beck, V. Joachim Haupt, Janine Roy, Jan Mönnich, René Jäkel, Michael Schroeder, Zerrin Isik
2013	—	`conf`	Answering Factoid Questions in the Biomedical Domain. BioASQ@CLEF Dirk Weissenborn, George Tsatsaronis, Michael Schroeder
2013	J	`jnl`	Automated Patent Categorization and Guided Patent Search using IPC as Inspired by MeSH and PubMed. J. Biomed. Semant. Daniel Eisinger, George Tsatsaronis, Markus Bundschus, Ulrich Wieneke, Michael Schroeder
2013	—	`conf`	Learning Formal Definitions for Biomedical Concepts. OWLED George Tsatsaronis, Alina Petrova, Maria Kissa, Yue Ma, Felix Distel, Franz Baader, Michael Schroeder
2012	J	`jnl`	A Maximum-Entropy approach for accurate document annotation in the biomedical domain. J. Biomed. Semant. George Tsatsaronis, Natalia Macari, Sunna Torge, Heiko Dietze, Michael Schroeder
2012	—	`conf`	BioASQ: A Challenge on Large-Scale Biomedical Semantic Indexing and Question Answering. AAAI Fall Symposium: Information Retrieval and Knowledge Discovery in Biomedical Text George Tsatsaronis, Michael Schroeder, Georgios Paliouras, Yannis Almirantis, Ion Androutsopoulos, Éric Gaussier, Patrick Gallinari, Thierry Artières, Michael R. Alvers, Matthias Zschunke, Axel-Cyrille Ngonga Ngomo
2012	J	`jnl`	Extending ontologies by finding siblings using set expansion techniques. Bioinform. Götz Fabian, Thomas Wächter, Michael Schroeder
2012	J	`jnl`	Google Goes Cancer: Improving Outcome Prediction for Cancer Patients by Network-Based Ranking of Marker Genes. PLoS Comput. Biol. Christof Winter, Glen Kristiansen, Stephan Kersting, Janine Roy, Daniela Aust, Thomas Knösel, Petra Rümmele, Beatrix Jahnke, Vera Hentrich, Felix Rückert, Marco Niedergethmann, Wilko Weichert, Marcus Bahra, Hans J. Schlitt, Utz Settmacher, Helmut Friess, Markus W. Büchler, Hans-Detlev Saeger, Michael Schroeder, Christian Pilarsky, Robert Grützmann
2012	—	`conf`	Semantic Interoperability Between Clinical Research and Healthcare: The PONTE Approach. ESWC (Satellite Events) Anastasios Tagaris, Efthymios Chondrogiannis, Vassiliki Andronikou, George Tsatsaronis, Konstantinos Mourtzoukos, Joseph Roumier, Nikolaos Matskanis, Michael Schroeder, Philippe Massonet, Dimitrios D. Koutsouris, Theodora A. Varvarigou
2011	—	`conf`	DOG4DAG: semi-automated ontology generation in OBO-Edit and Protégé. SWAT4LS Thomas Wächter, Götz Fabian, Michael Schroeder
2011	B	`conf`	How to Become a Group Leader? or Modeling Author Types Based on Graph Mining. TPDL George Tsatsaronis, Iraklis Varlamis, Sunna Torge, Matthias Reimann, Kjetil Nørvåg, Michael Schroeder, Matthias Zschunke
2011	J	`jnl`	Identification of cavities on protein surface using multiple computational approaches for drug binding site prediction. Bioinform. Zengming Zhang, Yu Li, Biaoyang Lin, Michael Schroeder, Bingding Huang
2011	J	`jnl`	MetaDBSite: a meta approach to improve protein DNA-binding sites prediction. BMC Syst. Biol. Jing-Na Si, Zengming Zhang, Biaoyang Lin, Michael Schroeder, Bingding Huang
2011	J	`jnl`	Old friends in new guise: repositioning of known drugs with structural bioinformatics. Briefings Bioinform. V. Joachim Haupt, Michael Schroeder
2011	C	`conf`	Semantic search for the life sciences. ISI Michael Schroeder
2011	J	`jnl`	The GNAT library for local and remote gene mention normalization. Bioinform. Jörg Hakenberg, Martin Gerner, Maximilian Haeussler, Illés Solt, Conrad Plake, Michael Schroeder, Graciela Gonzalez, Goran Nenadic, Casey M. Bergman
2010	J	`jnl`	MeMotif: a database of linear motifs in α-helical transmembrane proteins. Nucleic Acids Res. Annalisa Marsico, Kerstin Scheubert, Anne Tuukkanen, Andreas Henschel, Christof Winter, Rainer Winnenburg, Michael Schroeder
2010	J	`jnl`	Semi-automated ontology generation within OBO-Edit. Bioinform. Thomas Wächter, Michael Schroeder
2010	J	`jnl`	Structural fragment clustering reveals novel structural and functional motifs in BMC Bioinform. Annalisa Marsico, Andreas Henschel, Christof Winter, Anne Tuukkanen, Boris Vassilev, Kerstin Scheubert, Michael Schroeder
2010	J	`jnl`	SuperCYP: a comprehensive database on Cytochrome P450 enzymes including a tool for analysis of CYP-drug interactions. Nucleic Acids Res. Saskia Preissner, Katharina Kroll, Mathias Dunkel, Christian Senger, Gady Goldsobel, Daniel Kuzman, Stefan Günther, Rainer Winnenburg, Michael Schroeder, Robert Preissner
2009	J	`jnl`	A roadmap of clustering algorithms: finding a match for a biomedical application. Briefings Bioinform. Bill Andreopoulos, Aijun An, Xiaogang Wang, Michael Schroeder
2009	J	`jnl`	A user-centred evaluation framework for the Sealife semantic web browsers. BMC Bioinform. Helen Oliver, Gayo Diallo, Ed de Quincey, Dimitra Alexopoulou, Bianca Habermann, Patty Kostkova, Michael Schroeder, Simon Jupp, Khaled Khelif, Robert Stevens, Gawesh Jawaheer, Gemma Madle
2009	J	`jnl`	Biomedical word sense disambiguation with ontologies and metadata: automation meets accuracy. BMC Bioinform. Dimitra Alexopoulou, Bill Andreopoulos, Heiko Dietze, Andreas Doms, Fabien Gandon, Jörg Hakenberg, Khaled Khelif, Michael Schroeder, Thomas Wächter
2009	J	`jnl`	GoGene: gene annotation in the fast lane. Nucleic Acids Res. Conrad Plake, Loïc Royer, Rainer Winnenburg, Jörg Hakenberg, Michael Schroeder
2009	J	`jnl`	GoWeb: a semantic search engine for the life science web. BMC Bioinform. Heiko Dietze, Michael Schroeder
2009	—	`conf`	Identifying Hot Cancer and Novel Novel Cell-cycle Genes from Literature. GCB Loïc Royer, Conrad Plake, Michael Schroeder
2009	J	`jnl`	Improved mutation tagging with gene identifiers applied to membrane protein stability prediction. BMC Bioinform. Rainer Winnenburg, Conrad Plake, Michael Schroeder
2009	—	`conf`	Mining for Patterns of Semantic Link Usage: Do Domain Users Actually Like Semantic Browsing? Web Intelligence/IAT Workshops Ed de Quincey, Helen Oliver, Patty Kostkova, Gawesh Jawaheer, Gemma Madle, Gayo Diallo, Dimitra Alexopoulou, Michael Schroeder, Bianca Habermann, Khaled Khelif, Simon Jupp, Robert Stevens
2009	—	`ch.`	Semantic Search with GoPubMed. REWERSE Andreas Doms, Michael Schroeder
2009	J	`jnl`	Triangle network motifs predict complexes by complementing high-error interactomes with structural information. BMC Bioinform. Bill Andreopoulos, Christof Winter, Dirk Labudde, Michael Schroeder
2008	J	`jnl`	A Semantic Web for bioinformatics: goals, tools, systems, applications. BMC Bioinform. Nicola Cannata, Michael Schroeder, Roberto Marangoni, Paolo Romano
2008	J	`jnl`	Facts from text: can text mining help to scale-up high-quality manual curation of gene products with ontologies? Briefings Bioinform. Rainer Winnenburg, Thomas Wächter, Conrad Plake, Andreas Doms, Michael Schroeder
2008	—	`conf`	GoPubMed: Exploring Pubmed with Ontological Background Knowledge. Ontologies and Text Mining for Life Sciences Heiko Dietze, Dimitra Alexopoulou, Michael R. Alvers, Bill Barrio-Alvers, Andreas Doms, Jörg Hakenberg, Jan Mönnich, Conrad Plake, Andreas Reischuck, Loïc Royer, Thomas Wächter, Matthias Zschunke, Michael Schroeder
2008	—	`conf`	GoWeb: A Semantic Search Engine for the Life Science Web. SWAT4LS Heiko Dietze, Michael Schroeder
2008	C	`conf`	Inter-species normalization of gene mentions with GNAT. ECCB Jörg Hakenberg, Conrad Plake, Robert Leaman, Michael Schroeder, Graciela Gonzalez
2008	—	`conf`	Mutation tagging with gene identifiers applied to membrane protein stability prediction. AIMM Rainer Winnenburg, Conrad Plake, Michael Schroeder
2008	—	`conf`	Ontology learning with text mining: Two use cases in lipoprotein metabolism and toxicology. Ontologies and Text Mining for Life Sciences Dimitra Alexopoulou, Thomas Wächter, Laura Pickersgill, Cecilia Eyre, Michael Schroeder
2008	—	`ed.`	Proceedings of the German Conference on Bioinformatics, GCB 2008, September 9-12, 2008, Dresden, Germany. German Conference on Bioinformatics Andreas Beyer, Michael Schroeder
2008	—	`ch.`	Searching Biomedical Literature with Anatomy Ontologies. Anatomy Ontologies for Bioinformatics Thomas Wächter, Dimitra Alexopoulou, Heiko Dietze, Jörg Hakenberg, Michael Schroeder
2008	J	`jnl`	Terminologies for text-mining; an experiment in the lipoprotein metabolism domain. BMC Bioinform. Dimitra Alexopoulou, Thomas Wächter, Laura Pickersgill, Cecilia Eyre, Michael Schroeder
2008	J	`jnl`	Unraveling Protein Networks with Power Graph Analysis. PLoS Comput. Biol. Loïc Royer, Matthias Reimann, Bill Andreopoulos, Michael Schroeder
2008	J	`jnl`	Word Sense Disambiguation in biomedical ontologies with term co-occurrence analysis and document clustering. Int. J. Data Min. Bioinform. Bill Andreopoulos, Dimitra Alexopoulou, Michael Schroeder
2007	—	`conf`	07132 Report - Towards Interoperability of Biomedical Ontologies. Towards Interoperability of Biomedical Ontologies Mark A. Musen, Michael Schroeder, Barry Smith
2007	J	`jnl`	A novel pattern recognition algorithm to classify membrane protein unfolding pathways with high-throughput single-molecule force spectroscopy. Bioinform. Annalisa Marsico, Dirk Labudde, K. Tanuj Sapra, Daniel J. Muller, Michael Schroeder
2007	J	`jnl`	Agents in bioinformatics, computational and systems biology. Briefings Bioinform. Emanuela Merelli, Giuliano Armano, Nicola Cannata, Flavio Corradini, Mark d'Inverno, Andreas Doms, Phillip W. Lord, Andrew C. R. Martin, Luciano Milanesi, Steffen Möller, Michael Schroeder, Michael Luck
2007	J	`jnl`	Clustering by common friends finds locally significant proteins mediating modules. Bioinform. Bill Andreopoulos, Aijun An, Xiaogang Wang, Michalis Faloutsos, Michael Schroeder
2007	—	`ed.`	Distributed, High-Performance and Grid Computing in Computational Biology , International Workshop, GCCB 2006, Eilat, Israel, January 21, 2007, Proceeding GCCB Werner Dubitzky, Assaf Schuster, Peter M. A. Sloot, Michael Schroeder, Mathilde Romberg
2007	—	`conf`	Pattern Recognition of Single-Molecule Force Spectroscopy Data. ER Workshops Dirk Labudde, Annalisa Marsico, K. Tanuj Sapra, Michael Schroeder
2007	—	`conf`	Structural templates predict novel protein interactions and targets from pancreas tumour gene expression data. ISMB/ECCB (Supplement of Bioinformatics) Gihan Dawelbait, Christof Winter, Yanju Zhang, Christian Pilarsky, Robert Grützmann, Jörg-Christian Heinrich, Michael Schroeder
2007	—	`ed.`	Towards Interoperability of Biomedical Ontologies, 27.03. - 30.03.2007 Towards Interoperability of Biomedical Ontologies Mark A. Musen, Michael Schroeder, Barry Smith
2007	—	`conf`	Understanding of SMFS Barriers by Means of Energy Profiles. German Conference on Bioinformatics Frank Dressel, Annalisa Marsico, Anne Tuukkanen, Michael Schroeder, Dirk Labudde
2007	J	`jnl`	Using structural motif descriptors for sequence-based binding site prediction. BMC Bioinform. Andreas Henschel, Christof Winter, Wan Kyu Kim, Michael Schroeder
2007	J	`jnl`	Visualising protein interaction networks with power graphs. BMC Syst. Biol. Loïc Royer, Matthias Reimann, Bill Andreopoulos, Michael Schroeder
2006	—	`conf`	A Novel, Comprehensive Method to Detect and Predict Proteinprotein Interactions Applied to the Study of Vesicular Trafficking. German Conference on Bioinformatics Christof Winter, Thorsten Baust, Bernard Hoflack, Michael Schroeder
2006	—	`conf`	A Structure-Based Analysis of Single Molecule Force Spectroscopy (SMFS) Data for Bacteriorhodopsin and Four Mutants. CompLife Annalisa Marsico, K. Tanuj Sapra, Daniel J. Muller, Michael Schroeder, Dirk Labudde
2006	Misc	`conf`	A corpus-driven approach for design, evolution and alignment of ontologies. WSC Thomas Wächter, André Wobst, Michael Schroeder, He Tan, Patrick Lambrix
2006	—	`conf`	Classifying Permanent and Transient Protein Interactions. German Conference on Bioinformatics Samatha Kottha, Michael Schroeder
2006	J	`jnl`	Editorial - Semantic Web for Life Sciences. J. Web Semant. Michael Schroeder, Eric Neumann
2006	J	`jnl`	Equivalent binding sites reveal convergently evolved interaction motifs. Bioinform. Andreas Henschel, Wan Kyu Kim, Michael Schroeder
2006	—	`conf`	Improving Text Mining with Controlled Natural Language: A Case Study for Protein Interactions. DILS Tobias Kuhn, Loïc Royer, Norbert E. Fuchs, Michael Schroeder
2006	—	`conf`	Ontologies and Text Mining as a Basis for a Semantic Web for the Life Sciences. Reasoning Web Andreas Doms, Vaida Jakoniene, Patrick Lambrix, Michael Schroeder, Thomas Wächter
2006	—	`conf`	Prova: Rule-Based Java Scripting for Distributed Web Applications: A Case Study in Bioinformatics. EDBT Workshops Alexander Kozlenkov, Rafael Peñaloza, Vivek Nigam, Loïc Royer, Gihan Dawelbait, Michael Schroeder
2006	J	`jnl`	SCOPPI: a structural classification of protein-protein interfaces. Nucleic Acids Res. Christof Winter, Andreas Henschel, Wan Kyu Kim, Michael Schroeder
2006	J	`jnl`	SCOWLP: a web-based database for detailed characterization and visualization of protein interfaces. BMC Bioinform. Joan Teyra, Andreas Doms, Michael Schroeder, M. Teresa Pisabarro
2006	—	`conf`	Sealife: A Semantic Grid Browser for the Life Sciences Applied to the Study of Infectious Diseases. HealthGrid Michael Schroeder, Albert Burger, Patty Kostkova, Robert Stevens, Bianca Habermann, Rose Dieng-Kuntz
2006	J	`jnl`	The Many Faces of Protein-Protein Interactions: A Compendium of Interface Geometry. PLoS Comput. Biol. Wan Kyu Kim, Andreas Henschel, Christof Winter, Michael Schroeder
2006	—	`conf`	Topic 17: High-Performance Bioinformatics. Euro-Par Craig A. Stewart, Michael Schroeder, Concettina Guerra, Akihiko Konagaya
2005	J	`jnl`	A Parameterised Hierarchy of Argumentation Semantics for Extended Logic Programming and its Application to the Well-founded Semantics. Theory Pract. Log. Program. Ralf Schweimeier, Michael Schroeder
2005	J	`jnl`	Comparative interactomics analysis of protein family interaction networks using PSIMAP (protein structural interactome map). Bioinform. Daeui Park, Semin Lee, Dan M. Bolser, Michael Schroeder, Michael Lappe, Donghoon Oh, Jong Bhak
2005	J	`jnl`	GoPubMed: exploring PubMed with the Gene Ontology. Nucleic Acids Res. Andreas Doms, Michael Schroeder
2005	J	`jnl`	PSIbase: a database of Protein Structural Interactome map (PSIMAP). Bioinform. Sungsam Gong, Giseok Yoon, Insoo Jang, Dan M. Bolser, Panos Dafas, Michael Schroeder, Hansol Choi, Yoobok Cho, Kyungsook Han, Sunghoon Lee, Hwanho Choi, Michael Lappe, Liisa Holm, Sangsoo Kim, Donghoon Oh, Jonghwa Bhak
2005	—	`conf`	Structural Protein Interactions Predict Kinase-Inhibitor Interactions in Upregulated Pancreas Tumour Genes Expression Data. CompLife Gihan Dawelbait, Christian Pilarsky, Yanju Zhang, Robert Grützmann, Michael Schroeder
2005	—	`conf`	Using residue propensities and tightness of fit to improve rigid-body protein-docking. German Conference on Bioinformatics Bingding Huang, Michael Schroeder
2004	B	`conf`	Fuzzy Unification and Argumentation for Well-Founded Semantics. SOFSEM Ralf Schweimeier, Michael Schroeder
2004	—	`conf`	GoPubMed: ontology-based literature search applied to Gene Ontology and PubMed. German Conference on Bioinformatics Ralph Delfs, Andreas Doms, Alexander Kozlenkov, Michael Schroeder
2004	J	`jnl`	Grid-Computing. Inform. Spektrum François Bry, Wolfgang E. Nagel, Michael Schroeder
2004	—	`ch.`	Integrating Gene Expression Data, Protein Interaction Data, and Ontology-Based Literature Searches. Artificial Intelligence Methods And Tools For Systems Biology Panos Dafas, Alexander Kozlenkov, Alan Robinson, Michael Schroeder
2004	—	`conf`	PROVA: Rule-Based Java-Scripting for a Bioinformatics Semantic Web. DILS Alexander Kozlenkov, Michael Schroeder
2004	J	`jnl`	Performance evaluation of market-based resource allocation for Grid computing. Concurr. Pract. Exp. Jacek Gomoluch, Michael Schroeder
2004	J	`jnl`	Using convex hulls to extract interaction interfaces from known structures. Bioinform. Panos Dafas, Dan M. Bolser, Jacek Gomoluch, Jong-Chan Park, Michael Schroeder
2003	J	`jnl`	A Parameterised Hierarchy of Argumentation Semantics for Extended Logic Programming and its Application to the Well-founded Semantics CoRR Ralf Schweimeier, Michael Schroeder
2003	—	`conf`	Advancing Profile Use in Agent Societies. ESAW Penny Noy, Michael Schroeder
2003	—	`conf`	Fast and efficient computation of domain-domaininteractions from known protein structures in the PDB. German Conference on Bioinformatics Panos Dafas, Dan M. Bolser, Jacek Gomoluch, Jong-Chan Park, Michael Schroeder
2003	—	`conf`	Interaction Monitoring and Termination Detection for Agent Societies: Preliminary Results. ESAW Tshiamo Motshegwa, Michael Schroeder
2003	—	`conf`	Market-based Resource Allocation for Grid Computing: A Model and Simulation. Middleware Workshops Jacek Gomoluch, Michael Schroeder
2003	J	`jnl`	Rule-based agents for the semantic web. Electron. Commer. Res. Appl. Jens Dietrich, Alexander Kozlenkov, Michael Schroeder, Gerd Wagner
2003	—	`ed.`	Rules and Rule Markup Languages for the Semantic Web, Second International Workshop, RuleML 2003, Sanibel Island, FL, USA, October 20, 2003, Proceedings RuleML Michael Schroeder, Gerd Wagner
2003	—	`conf`	Structural Protein Interactions: From Months to Minutes. PARCO Panos Dafas, Jacek Gomoluch, Alexander Kozlenkov, Michael Schroeder
2003	J	`jnl`	Visualisation and graph-theoretic analysis of a large-scale protein structural interactome. BMC Bioinform. Dan M. Bolser, Panos Dafas, Richard Harrington, Jong-Chan Park, Michael Schroeder
2002	—	`conf`	Arguments and Misunderstandings: Fuzzy Unification for Negotiating Agents. CLIMA Michael Schroeder, Ralf Schweimeier
2002	J	`jnl`	Consistent Integration of Non-reliable Heterogeneous Information Resources Applied to the Annotation of Transmembrane Proteins. Comput. Chem. Steffen Möller, Michael Schroeder, Rolf Apweiler
2002	A	`conf`	Defining like-minded agents with the aid of visualization. AAMAS Penny Noy, Michael Schroeder
2002	A	`conf`	Fuzzy argumentation for negotiating agents. AAMAS Michael Schroeder, Ralf Schweimeier
2002	A	`conf`	Notions of Attack and Justified Arguments for Extended Logic Programs. ECAI Ralf Schweimeier, Michael Schroeder
2002	—	`ed.`	RuleML 2002, Proceedings of the International Workshop on Rule Markup Languages for Business Rules on the Semantic Web, 14 June 2002, Sardinia, Italy (In conjunction with the First International Semantic Web Conference ISWC2002 and hosted by SIG2 of the OntoWeb Network RuleML Michael Schroeder, Gerd Wagner
2002	J	`jnl`	Using Extended Logic Programming for Alarm-Correlation in Cellular Phone Networks. Appl. Intell. Carlos Viegas Damásio, Peter Fröhlich, Wolfgang Nejdl, Luís Moniz Pereira, Michael Schroeder
2002	J	`jnl`	Well-Founded Argumentation Semantics for Extended Logic Programming CoRR Ralf Schweimeier, Michael Schroeder
2002	—	`conf`	Well-founded argumentation semantics for extended logic programming. NMR Ralf Schweimeier, Michael Schroeder
2001	J	`jnl`	A Quantitative and Qualitative Comparison of Distributed Information Processing Using Mobile Agents Realised in RMI and Voyager. Int. J. Softw. Eng. Knowl. Eng. Patrick Cogan, Jacek Gomoluch, Michael Schroeder
2001	J	`jnl`	Approaches to visualisation in bioinformatics: from dendrograms to Space Explorer. Inf. Sci. Michael Schroeder, David R. Gilbert, Jacques van Helden, Penny Noy
2001	—	`conf`	Efficiency improvements for interactions of web-agents. Agents Michael Schroeder, Luke Boro, Julie A. McCann
2001	—	`conf`	Flexible Load Balancing in Distributed Information Agent Systems. Multi-Agent-Systems and Applications Jacek Gomoluch, Michael Schroeder
2001	J	`jnl`	Information agents on the move. Softw. Focus Michael Schroeder, Jacek Gomoluch
2001	—	`conf`	Multi-agent visualisation based on multivariate data. Agents Michael Schroeder, Penny Noy
2000	—	`conf`	Application of Regulatory Sequence Analysis and Metabolic Network Analysis to the Interpretation of Gene Expression Data. JOBIM Jacques van Helden, David R. Gilbert, Lorenz Wernisch, Michael Schroeder, Shoshana J. Wodak
2000	C	`conf`	FURY: Fuzzy Unification and Resolution Based on Edit Distance. BIBE David R. Gilbert, Michael Schroeder
2000	—	`conf`	Mobile Agents for Distributed Processing. Agents Workshop on Infrastructure for Multi-Agent Systems Penny Noy, Michael Schroeder
2000	—	`conf`	Rough traders and intelligent clients. Agents Michael Schroeder, Julie A. McCann, Dan Haynes
2000	J	`jnl`	Towards a visualization of arguing agents. Future Gener. Comput. Syst. Michael Schroeder
2000	—	`conf`	Trading without Explicit Ontologies. AMEC Michael Schroeder, Julie A. McCann, Dan Haynes
2000	J	`jnl`	Vivid Agents: Theory, Architecture, and Applications. Appl. Artif. Intell. Michael Schroeder, Gerd Wagner
1999	—	`conf`	An Efficient Argumentation Framework for Negtiating Autonomous Agents. MAAMAW Michael Schroeder
1999	B	`conf`	An In-Service Agent Monitoring and Analysis System. ICTAI Zhan Cui, Brian Odgers, Michael Schroeder
1999	—	`conf`	Facilitating context-sensitive queries: A tool to rephrase SWISS-PROT. German Conference on Bioinformatics Steffen Möller, Michael J. Wise, David P. Kreil, Michael Schroeder, D. Gilbest, Rolf Apweiler
1999	J	`jnl`	Negotiation in multi-agent systems. Knowl. Eng. Rev. Martin Beer, Mark d'Inverno, Michael Luck, Nick R. Jennings, Chris Preist, Michael Schroeder
1999	C	`conf`	ULTIMA RATIO - A Visual Language for Argumentation. IV Michael Schroeder, Daniela Alina Plewe, Andreas Raab
1999	C	`conf`	Using Extended Logic Programming for Alarm-Correlation in Cellular Phone Networks. IEA/AIE Peter Fröhlich, Wolfgang Nejdl, Michael Schroeder, Carlos Viegas Damásio, Luís Moniz Pereira
1999	—	`conf`	Using Singular Value Decomposition to Visualise Relations Within Multi-Agent Systems. Agents Michael Schroeder
1999	—	`conf`	Verification of Business Processes for a Correspondence Handling Center Using CCS. EUROVAV Michael Schroeder
1998	J	`jnl`	Strategies in Model-Based Diagnosis. J. Autom. Reason. Peter Fröhlich, Wolfgang Nejdl, Michael Schroeder
1998	—	`conf`	Ultima Ratio: Should Hamlet kill Claudius? Agents Michael Schroeder, Daniela Alina Plewe, Andreas Raab
1997	—	`conf`	Diagnostic Agents for Distributed Systems. ModelAge Workshop Peter Fröhlich, Iara de Almeida Móra, Wolfgang Nejdl, Michael Schroeder
1997	—	`conf`	Distributed Diagnosis by Vivid Agents. Agents Michael Schroeder, Gerd Wagner
1997	J	`jnl`	Methodological foundations for agent-based systems. Knowl. Eng. Rev. Michael Fisher, Jörg P. Müller, Michael Schroeder, Geof Staniford, Gerd Wagner
1997	B	`conf`	REVISE: Logic Programming and Diagnosis. LPNMR Carlos Viegas Damásio, Luís Moniz Pereira, Michael Schroeder
1997	Misc	`conf`	Vivid Agents Arguing about Distributed Extended Logic Programs. EPIA Michael Schroeder, Iara de Almeida Móra, José Júlio Alferes
1997	C	`conf`	Working Group Report on Collaborative Agents in Distributed Web Applications. WETICE Robert Tolksdorf, Ted Goddard, Muralidharan Srinivasan, Stefan Fünfrocken, Michael Schroeder
1996	—	`conf`	A Deliberative and Reactive Diagnosis Agent Based on Logic Programming. ATAL Michael Schroeder, Iara de Almeida Móra, Luís Moniz Pereira
1996	B	`conf`	A Deliberative and Reactive Diagnosis Agent Based on Logic Programming. ICTAI Michael Schroeder, Iara de Almeida Móra, Luís Moniz Pereira
1996	B	`conf`	Design and Implementation of Diagnostic Strategies Using Modal Logic. JELIA Peter Fröhlich, Wolfgang Nejdl, Michael Schroeder
1995	A*	`conf`	A Formal Framework for Representing Diagnosis Strategies in Model-Based Diagnosis Systems. IJCAI Wolfgang Nejdl, Peter Fröhlich, Michael Schroeder