Michael I. Miller

165 papers A* 1A 1B 4Misc 5Journal 115Unranked 38

Year	Rank	Type	Title / Venue / Authors
2024	J	`jnl`	Preserving Derivative Information while Transforming Neuronal Curves. Neuroinformatics Thomas L. Athey, Daniel Jacob Tward, Ulrich Mueller, Laurent Younes, Joshua T. Vogelstein, Michael I. Miller
2024	J	`jnl`	Space-feature measures on meshes for mapping spatial transcriptomics. Medical Image Anal. Michael I. Miller, Alain Trouvé, Laurent Younes
2023	J	`jnl`	BrainLine: An Open Pipeline for Connectivity Analysis of Heterogeneous Whole-Brain Fluorescence Volumes. Neuroinformatics Thomas L. Athey, Matthew A. Wright, Marija Pavlovic, Vikram Chandrashekhar, Karl Deisseroth, Michael I. Miller, Joshua T. Vogelstein
2023	J	`jnl`	Preserving Derivative Information while Transforming Neuronal Curves. CoRR Thomas L. Athey, Daniel Jacob Tward, Ulrich Mueller, Laurent Younes, Joshua T. Vogelstein, Michael I. Miller
2023	—	`conf`	Prospective Learning: Principled Extrapolation to the Future. CoLLAs Ashwin De Silva, Rahul Ramesh, Lyle H. Ungar, Marshall G. Hussain Shuler, Noah J. Cowan, Michael L. Platt, Chen Li, Leyla Isik, Seung-Eon Roh, Adam S. Charles, Archana Venkataraman, Brian Caffo, Javier J. How, Justus M. Kebschull, John W. Krakauer, Maxim Bichuch, Kaleab Alemayehu Kinfu, Eva Yezerets, Dinesh Jayaraman, Jong M. Shin, Soledad Villar, Ian Phillips, Carey E. Priebe, Thomas Hartung, Michael I. Miller, Jayanta Dey, Ningyuan Huang, Eric Eaton, Ralph Etienne-Cummings, Elizabeth L. Ogburn, Randal C. Burns, Onyema Osuagwu, Brett Mensh, Alysson R. Muotri, Julia Brown, Chris White, Weiwei Yang, Andrei A. Rusu, Timothy D. Verstynen, Konrad P. Kording, Pratik Chaudhari, Joshua T. Vogelstein
2022	J	`jnl`	Image Varifolds on Meshes for Mapping Spatial Transcriptomics. CoRR Michael I. Miller, Alain Trouvé, Laurent Younes
2022	J	`jnl`	Prospective Learning: Back to the Future. CoRR Joshua T. Vogelstein, Timothy D. Verstynen, Konrad P. Kording, Leyla Isik, John W. Krakauer, Ralph Etienne-Cummings, Elizabeth L. Ogburn, Carey E. Priebe, Randal C. Burns, Kwame S. Kutten, James J. Knierim, James B. Potash, Thomas Hartung, Lena Smirnova, Paul Worley, Alena V. Savonenko, Ian Phillips, Michael I. Miller, René Vidal, Jeremias Sulam, Adam S. Charles, Noah J. Cowan, Maxim Bichuch, Archana Venkataraman, Chen Li, Nitish V. Thakor, Justus M. Kebschull, Marilyn S. Albert, Jinchong Xu, Marshall G. Hussain Shuler, Brian Caffo, J. Tilak Ratnanather, Ali Geisa, Seung-Eon Roh, Eva Yezerets, Meghana Madhyastha, Javier J. How, Tyler M. Tomita, Jayanta Dey, Ningyuan Huang, Jong M. Shin, Kaleab Alemayehu Kinfu, Pratik Chaudhari, Ben Baker, Anna Schapiro, Dinesh Jayaraman, Eric Eaton, Michael L. Platt, Lyle H. Ungar, Leila Wehbe, Ádám Kepecs, Amy Christensen, Onyema Osuagwu, Bing Brunton, Brett Mensh, Alysson R. Muotri, Gabriel A. Silva, Francesca Puppo, Florian Engert, Elizabeth Hillman, Julia Brown, Chris White, Weiwei Yang
2021	J	`jnl`	Corrigendum to "Robust Diffeomorphic Mapping via Geodesically Controlled Active Shapes". Int. J. Biomed. Imaging Daniel Jacob Tward, Jun Ma, Michael I. Miller, Laurent Younes
2021	J	`jnl`	Fitting Splines to Axonal Arbors Quantifies Relationship Between Branch Order and Geometry. Frontiers Neuroinformatics Thomas L. Athey, Jacopo Teneggi, Joshua T. Vogelstein, Daniel Jacob Tward, Ulrich Mueller, Michael I. Miller
2021	J	`jnl`	Fitting Splines to Axonal Arbors Quantifies Relationship between Branch Order and Geometry. CoRR Thomas L. Athey, Jacopo Teneggi, Joshua T. Vogelstein, Daniel Tward, Ulrich Mueller, Michael I. Miller
2021	—	`conf`	From Picoscale Pathology to Decascale Disease: Image Registration with a Scattering Transform and Varifolds for Manipulating Multiscale Data. ML-CDS@MICCAI Kaitlin M. Stouffer, Zhenzhen Wang, Eileen Xu, Karl Lee, Paige Lee, Michael I. Miller, Daniel Jacob Tward
2021	J	`jnl`	Hidden Markov Modeling for Maximum Likelihood Neuron Reconstruction. CoRR Thomas L. Athey, Daniel Tward, Ulrich Mueller, Michael I. Miller
2021	—	`conf`	Multi Scale Diffeomorphic Metric Mapping of Spatial Transcriptomics Datasets. CVPR Workshops Michael I. Miller, Jean Fan, Daniel Jacob Tward
2020	—	`conf`	Coarse-to-Fine Hamiltonian Dynamics of Hierarchical Flows in Computational Anatomy. CVPR Workshops Michael I. Miller, Daniel Jacob Tward, Alain Trouvé
2020	—	`conf`	Infinitesimal Drift Diffeomorphometry Models for Population Shape Analysis. CVPR Workshops Brian C. Lee, Daniel Jacob Tward, Zhiyi Hu, Alain Trouvé, Michael I. Miller
2019	—	`conf`	3D Mapping of Serial Histology Sections with Anomalies Using a Novel Robust Deformable Registration Algorithm. MBIA/MFCA@MICCAI Daniel Tward, Xu Li, Bing-Xing Huo, Brian C. Lee, Partha P. Mitra, Michael I. Miller
2019	—	`conf`	A Model for Elastic Evolution on Foliated Shapes. IPMI Dai-Ni Hsieh, Sylvain Arguillère, Nicolas Charon, Michael I. Miller, Laurent Younes
2019	—	`conf`	Diffeomorphic Upsampling of Serially Acquired Sparse 2D Cross-Sections in Cardiac MRI. EMBC Brian C. Lee, Daniel Jacob Tward, Jinchi Wei, Dnyanesh Tipre, Robert G. Weiss, Michael I. Miller, Siamak Ardekani
2019	—	`conf`	Expanding the Computational Anatomy Gateway from clinical imaging to basic neuroscience research. PEARC Daniel Tward, Anthony Kolasny, Fatima Khan, Juan Troncoso, Michael I. Miller
2019	J	`jnl`	Multi-atlas tool for automated segmentation of brain gray matter nuclei and quantification of their magnetic susceptibility. NeuroImage Xu Li, Lin Chen, Kwame S. Kutten, Can Ceritoglu, Yue Li, Ningdong Kang, John T. Hsu, Ye Qiao, Hongjiang Wei, Chunlei Liu, Michael I. Miller, Susumu Mori, David M. Yousem, Peter C. M. van Zijl, Andreia V. Faria
2018	—	`conf`	Changepoint analysis of putamen and thalamus subregions in premanifest huntington's disease. ISBI Xiaoqing Tan, Christopher A. Ross, Michael I. Miller, Xiaoying Tang
2018	J	`jnl`	Characterizing the human hippocampus in aging and Alzheimer's disease using a computational atlas derived from ex vivo MRI and histology. Proc. Natl. Acad. Sci. USA Daniel H. Adler, Laura E. M. Wisse, Ranjit Ittyerah, John Pluta, Song-Lin Ding, Long Xie, Jiancong Wang, Salmon Kadivar, John L. Robinson, Theresa Schuck, John Q. Trojanowski, Murray Grossman, John A. Detre, Mark A. Elliott, Jon B. Toledo, Weixia Liu, Stephen Pickup, Michael I. Miller, Sandhitsu R. Das, David A. Wolk, Paul A. Yushkevich
2018	J	`jnl`	On variational solutions for whole brain serial-section histology using a Sobolev prior in the computational anatomy random orbit model. PLoS Comput. Biol. Brian C. Lee, Daniel Jacob Tward, Partha P. Mitra, Michael I. Miller
2017	—	`conf`	A Large Deformation Diffeomorphic Approach to Registration of CLARITY Images via Mutual Information. MICCAI (1) Kwame S. Kutten, Nicolas Charon, Michael I. Miller, J. Tilak Ratnanather, Jordan Matelsky, Alexander D. Baden, Kunal Lillaney, Karl Deisseroth, Li Ye, Joshua T. Vogelstein
2017	J	`jnl`	Parametric Surface Diffeomorphometry for Low Dimensional Embeddings of Dense Segmentations and Imagery. IEEE Trans. Pattern Anal. Mach. Intell. Daniel Jacob Tward, Michael I. Miller, Alain Trouvé, Laurent Younes
2017	—	`conf`	Performance of Image Matching in the Computational Anatomy Gateway: CPU and GPU Implementations in OpenCL. PEARC Daniel Jacob Tward, Brian C. Lee, Partha P. Mitra, Michael I. Miller
2017	—	`conf`	Unbiased Diffeomorphic Mapping of Longitudinal Data with Simultaneous Subject Specific Template Estimation. GRAIL/MFCA/MICGen@MICCAI Daniel Tward, Michael I. Miller
2016	J	`jnl`	A Diffeomorphic Approach to Multimodal Registration with Mutual Information: Applications to CLARITY Mouse Brain Images. CoRR Kwame S. Kutten, Nicolas Charon, Michael I. Miller, J. Tilak Ratnanather, Karl Deisseroth, Li Ye, Joshua T. Vogelstein
2016	—	`conf`	An image registration pipeline for analysis of transsynaptic tracing in mice. Biomedical Applications in Molecular, Structural, and Functional Imaging Kwame S. Kutten, Stephen M. Eacker, Valina L. Dawson, Ted M. Dawson, J. Tilak Ratnanather, Michael I. Miller
2016	—	`conf`	Change Point Estimation of the Hippocampal Volumes in Alzheimer's Disease. CRV Xiaoying Tang, Marilyn S. Albert, Michael I. Miller, Laurent Younes
2016	J	`jnl`	Deformably Registering and Annotating Whole CLARITY Brains to an Atlas via Masked LDDMM. CoRR Kwame S. Kutten, Joshua T. Vogelstein, Nicolas Charon, Li Ye, Karl Deisseroth, Michael I. Miller
2016	J	`jnl`	Diffeomorphic Surface Registration with Atrophy Constraints. SIAM J. Imaging Sci. Sylvain Arguillère, Michael I. Miller, Laurent Younes
2016	J	`jnl`	MRICloud: Delivering High-Throughput MRI Neuroinformatics as Cloud-Based Software as a Service. Comput. Sci. Eng. Susumu Mori, Dan Wu, Can Ceritoglu, Yue Li, Anthony Kolasny, Marc Vaillant, Andreia V. Faria, Kenichi Oishi, Michael I. Miller
2016	—	`conf`	Reducing Variability in Anatomical Definitions Over Time Using Longitudinal Diffeomorphic Mapping. SeSAMI@MICCAI Daniel Jacob Tward, Chelsea S. Sicat, Timothy Brown, Arnold Bakker, Michael I. Miller
2016	J	`jnl`	Resource atlases for multi-atlas brain segmentations with multiple ontology levels based on T1-weighted MRI. NeuroImage Dan Wu, Ting Ma, Can Ceritoglu, Yue Li, Jill Chotiyanonta, Zhipeng Hou, John T. Hsu, Xin Xu, Timothy Brown, Michael I. Miller, Susumu Mori
2016	J	`jnl`	Shape analysis of hypertrophic and hypertensive heart disease using MRI-based 3D surface models of left ventricular geometry. Medical Image Anal. Siamak Ardekani, Saurabh Jain, Alianna Sanzi, Celia P. Corona-Villalobos, Theodore P. Abraham, M. Roselle Abraham, Stefan L. Zimmerman, Katherine C. Wu, Raimond L. Winslow, Michael I. Miller, Laurent Younes
2016	—	`conf`	Tools for studying populations and timeseries of neuroanatomy enabled through GPU acceleration in the Computational Anatomy Gateway. XSEDE Daniel Jacob Tward, Anthony Kolasny, Chelsea S. Sicat, Timothy Brown, Michael I. Miller
2015	—	`conf`	A fast atlas pre-selection procedure for multi-atlas based brain segmentation. EMBC Jingbo Ma, Heather T. Ma, Hengtong Li, Chenfei Ye, Dan Wu, Xiaoying Tang, Michael I. Miller, Susumu Mori
2015	B	`conf`	Simultaneous skull-stripping and lateral ventricle segmentation via fast multi-atlas likelihood fusion. Image Processing Xiaoying Tang, Kwame S. Kutten, Can Ceritoglu, Susumu Mori, Michael I. Miller
2014	J	`jnl`	A Bayesian approach to the creation of a study-customized neonatal brain atlas. NeuroImage Yajing Zhang, Linda Chang, Can Ceritoglu, Jon Skranes, Thomas Ernst, Susumu Mori, Michael I. Miller, Kenichi Oishi
2014	—	`conf`	Computational Anatomy Gateway: Leveraging XSEDE Computational Resources for Shape Analysis. XSEDE Saurabh Jain, Daniel Jacob Tward, David S. Lee, Anthony Kolasny, Timothy Brown, J. Tilak Ratnanather, Michael I. Miller, Laurent Younes
2014	—	`conf`	Estimating dense cardiac 3D motion using sparse 2D tagged MRI cross-sections. EMBC Siamak Ardekani, Geoffrey Gunter, Saurabh Jain, Robert G. Weiss, Michael I. Miller, Laurent Younes
2014	J	`jnl`	Evaluation of group-specific, whole-brain atlas generation using Volume-based Template Estimation (VTE): Application to normal and Alzheimer's populations. NeuroImage Yajing Zhang, Jiangyang Zhang, Johnny T. C. Hsu, Kenichi Oishi, Andreia Faria, Marilyn S. Albert, Michael I. Miller, Susumu Mori
2014	—	`conf`	Improved Reproducibility of Neuroanatomical Definitions through Diffeomorphometry and Complexity Reduction. MLMI Daniel Jacob Tward, Jorge Jovicich, Andrea Soricelli, Giovanni B. Frisoni, Alain Trouvé, Laurent Younes, Michael I. Miller
2014	J	`jnl`	Knowledge-based automated reconstruction of human brain white matter tracts using a path-finding approach with dynamic programming. NeuroImage Muwei Li, J. Tilak Ratnanather, Michael I. Miller, Susumu Mori
2014	J	`jnl`	Tools for multiple granularity analysis of brain MRI data for individualized image analysis. NeuroImage Aigerim Djamanakova, Xiaoying Tang, Xin Li, Andreia V. Faria, Can Ceritoglu, Kenichi Oishi, Argye E. Hillis, Marilyn S. Albert, Constantine G. Lyketsos, Michael I. Miller, Susumu Mori
2013	J	`jnl`	Cortico-Cortical, Cortico-Striatal, and Cortico-Thalamic White Matter Fiber Tracts Generated in the Macaque Brain via Dynamic Programming. Brain Connect. J. Tilak Ratnanather, Rakesh M. Lal, Michael An, Clare B. Poynton, Muwei Li, Hangyi Jiang, Kenichi Oishi, Lynn D. Selemon, Susumu Mori, Michael I. Miller
2013	J	`jnl`	High-throughput neuro-imaging informatics. Frontiers Neuroinformatics Michael I. Miller, Andreia V. Faria, Kenichi Oishi, Susumu Mori
2013	—	`conf`	Metric Space Structures for Computational Anatomy. MLMI Jianqiao Feng, Xiaoying Tang, Minh Tang, Carey E. Priebe, Michael I. Miller
2013	J	`jnl`	Northwestern University Schizophrenia Data and Software Tool (NUSDAST). Frontiers Neuroinformatics Lei Wang, Alexander Kogan, Derin J. Cobia, Kathryn I. Alpert, Anthony Kolasny, Michael I. Miller, Daniel S. Marcus
2013	J	`jnl`	Robust Diffeomorphic Mapping via Geodesically Controlled Active Shapes. Int. J. Biomed. Imaging Daniel Jacob Tward, Jun Ma, Michael I. Miller, Laurent Younes
2012	J	`jnl`	Atlas-based analysis of resting-state functional connectivity: Evaluation for reproducibility and multi-modal anatomy-function correlation studies. NeuroImage Andreia Faria, Suresh Joel, Yajing Zhang, Kenichi Oishi, Peter C. M. van Zijl, Michael I. Miller, James J. Pekar, Susumu Mori
2012	J	`jnl`	Image-Based Estimation of Ventricular Fiber Orientations for Personalized Modeling of Cardiac Electrophysiology. IEEE Trans. Medical Imaging Fijoy Vadakkumpadan, Hermenegild Arevalo, Can Ceritoglu, Michael I. Miller, Natalia A. Trayanova
2012	J	`jnl`	Ontological labels for automated location of anatomical shape differences. J. Biomed. Informatics Shane Steinert-Threlkeld, Siamak Ardekani, José L. V. Mejino Jr., Landon Detwiler, James F. Brinkley, Michael Halle, Ron Kikinis, Raimond L. Winslow, Michael I. Miller, J. Tilak Ratnanather
2012	J	`jnl`	Principal Component Based Diffeomorphic Surface Mapping. IEEE Trans. Medical Imaging Anqi Qiu, Laurent Younes, Michael I. Miller
2012	J	`jnl`	Spatiotemporal mapping of brain atrophy in mouse models of Huntington's disease using longitudinal in vivo magnetic resonance imaging. NeuroImage Manisha Aggarwal, Wenzhen Duan, Zhipeng Hou, Neal Rakesh, Qi Peng, Christopher A. Ross, Michael I. Miller, Susumu Mori, Jiangyang Zhang
2011	J	`jnl`	An MRI-based atlas and database of the developing mouse brain. NeuroImage Nelson Chuang, Susumu Mori, Akira Yamamoto, Hangyi Jiang, Xin Ye, Xin Xu, Linda J. Richards, Jeremy Nathans, Michael I. Miller, Arthur W. Toga, Richard L. Sidman, Jiangyang Zhang
2011	J	`jnl`	Diffuse Abnormality of Low to Moderately Organized White Matter in Schizophrenia. Brain Connect. Sarah A. J. Reading, Kenichi Oishi, Graham W. Redgrave, Julie McEntee, Megan Shanahan, Nadine Yoritomo, Laurent Younes, Susumu Mori, Michael I. Miller, Peter C. M. van Zijl, Russell L. Margolis, Christopher A. Ross
2011	J	`jnl`	Erratum to "Quantitative analysis of brain pathology based on MRI and brain atlases - Applications for cerebral palsy" [NeuroImage 54/3 (2011) 1854-1861]. NeuroImage Andreia Faria, Alexander Hoon, Elaine Stashinko, Xin Li, Hangyi Jiang, Ameneh Mashayekh, Kazi Akhter, John T. Hsu, Kenichi Oishi, Jiangyang Zhang, Michael I. Miller, Peter C. M. van Zijl, Susumu Mori
2011	—	`conf`	Image-based estimation of ventricular fiber orientations for patient-specific simulations. EMBC Fijoy Vadakkumpadan, Hermenegild Arevalo, Can Ceritoglu, Michael I. Miller, Natalia A. Trayanova
2011	—	`conf`	Matching Sparse Sets of Cardiac Image Cross-Sections Using Large Deformation Diffeomorphic Metric Mapping Algorithm. STACOM Siamak Ardekani, Aastha Jain, Saurabh Jain, Theodore P. Abraham, Maria Roselle Abraham, Stefan L. Zimmerman, Raimond L. Winslow, Michael I. Miller, Laurent Younes
2011	J	`jnl`	Multi-contrast human neonatal brain atlas: Application to normal neonate development analysis. NeuroImage Kenichi Oishi, Susumu Mori, Pamela K. Donohue, Thomas Ernst, Lynn Anderson, Steven Buchthal, Andreia Faria, Hangyi Jiang, Xin Li, Michael I. Miller, Peter C. M. van Zijl, Linda Chang
2011	—	`conf`	Ontological Labels for Automated Location of Left Ventricular Remodeling. ICSC Shane Steinert-Threlkeld, Siamak Ardekani, José L. V. Mejino Jr., Landon Detwiler, James F. Brinkley, Michael Halle, Ron Kikinis, Raimond L. Winslow, Michael I. Miller, J. Tilak Ratnanather
2011	J	`jnl`	Patient Specific Dosimetry Phantoms Using Multichannel LDDMM of the Whole Body. Int. J. Biomed. Imaging Daniel Jacob Tward, Can Ceritoglu, Anthony Kolasny, Gregory M. Sturgeon, William Paul Segars, Michael I. Miller, J. Tilak Ratnanather
2011	J	`jnl`	Quantitative analysis of brain pathology based on MRI and brain atlases - Applications for cerebral palsy. NeuroImage Andreia Faria, Alexander Hoon, Elaine Stashinko, Xin Li, Hangyi Jiang, Ameneh Mashayekh, Kazi Akhter, John T. Hsu, Kenichi Oishi, Jiangyang Zhang, Michael I. Miller, Peter C. M. van Zijl, Susumu Mori
2011	J	`jnl`	Quantization and analysis of hippocampal morphometric changes due to dementia of Alzheimer type using metric distances based on large deformation diffeomorphic metric mapping. Comput. Medical Imaging Graph. Elvan Ceyhan, Mirza Faisal Beg, Can Ceritoglu, Lei Wang, John C. Morris, John G. Csernansky, Michael I. Miller, J. Tilak Ratnanather
2011	J	`jnl`	Statistical Analysis of Cortical Morphometrics Using Pooled Distances Based on Labeled Cortical Distance Maps. J. Math. Imaging Vis. Elvan Ceyhan, M. Hosakere, T. Nishino, J. Alexopoulos, R. D. Todd, Kelly N. Botteron, Michael I. Miller, J. Tilak Ratnanather
2010	J	`jnl`	A Bayesian Generative Model for Surface Template Estimation. Int. J. Biomed. Imaging Jun Ma, Michael I. Miller, Laurent Younes
2010	J	`jnl`	Atlas Generation for Subcortical and Ventricular Structures With Its Applications in Shape Analysis. IEEE Trans. Image Process. Anqi Qiu, Timothy Brown, Bruce Fischl, Jun Ma, Michael I. Miller
2010	J	`jnl`	Atlas-based analysis of neurodevelopment from infancy to adulthood using diffusion tensor imaging and applications for automated abnormality detection. NeuroImage Andreia Faria, Jiangyang Zhang, Kenichi Oishi, Xin Li, Hangyi Jiang, Kazi Akhter, Laurent Hermoye, Seung-Koo Lee, Alexander Hoon, Elaine Stashinko, Michael I. Miller, Peter C. M. van Zijl, Susumu Mori
2010	J	`jnl`	Atlas-guided tract reconstruction for automated and comprehensive examination of the white matter anatomy. NeuroImage Yajing Zhang, Jiangyang Zhang, Kenichi Oishi, Andreia Faria, Hangyi Jiang, Xin Li, Kazi Akhter, Pedro Rosa-Neto, G. Bruce Pike, Alan C. Evans, Arthur W. Toga, Roger P. Woods, John C. Mazziotta, Michael I. Miller, Peter C. M. van Zijl, Susumu Mori
2010	J	`jnl`	Longitudinal characterization of brain atrophy of a Huntington's disease mouse model by automated morphological analyses of magnetic resonance images. NeuroImage Jiangyang Zhang, Qi Peng, Qing Li, Neda Jahanshad, Zhipeng Hou, Mali Jiang, Naoki Masuda, Douglas R. Langbehn, Michael I. Miller, Susumu Mori, Christopher A. Ross, Wenzhen Duan
2009	J	`jnl`	APOE related hippocampal shape alteration in geriatric depression. NeuroImage Anqi Qiu, Warren D. Taylor, Zheen Zhao, James R. MacFall, Michael I. Miller, Cynthia R. Key, Martha E. Payne, David C. Steffens, K. Ranga R. Krishnan
2009	J	`jnl`	Atlas-based whole brain white matter analysis using large deformation diffeomorphic metric mapping: Application to normal elderly and Alzheimer's disease participants. NeuroImage Kenichi Oishi, Andreia Faria, Hangyi Jiang, Xin Li, Kazi Akhter, Jiangyang Zhang, John T. Hsu, Michael I. Miller, Peter C. M. van Zijl, Marilyn S. Albert, Constantine G. Lyketsos, Roger P. Woods, Arthur W. Toga, G. Bruce Pike, Pedro Rosa-Neto, Alan C. Evans, John C. Mazziotta, Susumu Mori
2009	—	`conf`	Cardiac Motion Analysis in Ischemic and Non-Ischemic Cardiomyopathy Using Parallel Transport. ISBI Siamak Ardekani, Robert G. Weiss, Albert C. Lardo, Richard T. George, Joao A. C. Lima, Katherine C. Wu, Michael I. Miller, Raimond L. Winslow, Laurent Younes
2009	J	`jnl`	Evolutions equations in computational anatomy. NeuroImage Laurent Younes, Felipe Arrate, Michael I. Miller
2009	J	`jnl`	Landmark-referenced voxel-based analysis of diffusion tensor images of the brainstem white matter tracts: Application in patients with middle cerebral artery stroke. NeuroImage Weihong Zhang, Xin Li, Jiangyang Zhang, Andreas R. Luft, Daniel F. Hanley, Peter C. M. van Zijl, Michael I. Miller, Laurent Younes, Susumu Mori
2009	J	`jnl`	Multi-contrast large deformation diffeomorphic metric mapping for diffusion tensor imaging. NeuroImage Can Ceritoglu, Kenichi Oishi, Xin Li, Ming-Chung Chou, Laurent Younes, Marilyn S. Albert, Constantine G. Lyketsos, Peter C. M. van Zijl, Michael I. Miller, Susumu Mori
2009	J	`jnl`	Neuroanatomical asymmetry patterns in individuals with schizophrenia and their non-psychotic siblings. NeuroImage Anqi Qiu, Lei Wang, Laurent Younes, Michael P. Harms, J. Tilak Ratnanather, Michael I. Miller, John G. Csernansky
2009	J	`jnl`	Regional shape abnormalities in mild cognitive impairment and Alzheimer's disease. NeuroImage Anqi Qiu, Christine Fennema-Notestine, Anders M. Dale, Michael I. Miller
2009	J	`jnl`	Special Issue on Mathematics in Brain Imaging. NeuroImage Paul M. Thompson, Michael I. Miller, Russell A. Poldrack, Thomas E. Nichols, Jonathan E. Taylor, Keith J. Worsley, J. Tilak Ratnanather
2009	J	`jnl`	The emerging discipline of Computational Functional Anatomy. NeuroImage Michael I. Miller, Anqi Qiu
2009	J	`jnl`	Time sequence diffeomorphic metric mapping and parallel transport track time-dependent shape changes. NeuroImage Anqi Qiu, Marilyn S. Albert, Laurent Younes, Michael I. Miller
2008	J	`jnl`	Bayesian template estimation in computational anatomy. NeuroImage Jun Ma, Michael I. Miller, Alain Trouvé, Laurent Younes
2008	J	`jnl`	Human brain white matter atlas: Identification and assignment of common anatomical structures in superficial white matter. NeuroImage Kenichi Oishi, Karl Zilles, Katrin Amunts, Andreia Faria, Hangyi Jiang, Xin Li, Kazi Akhter, Kegang Hua, Roger P. Woods, Arthur W. Toga, G. Bruce Pike, Pedro Rosa-Neto, Alan C. Evans, Jiangyang Zhang, Hao Huang, Michael I. Miller, Peter C. M. van Zijl, John C. Mazziotta, Susumu Mori
2008	J	`jnl`	Intrinsic and extrinsic analysis in computational anatomy. NeuroImage Anqi Qiu, Laurent Younes, Michael I. Miller
2008	J	`jnl`	Large Deformation Diffeomorphic Metric Curve Mapping. Int. J. Comput. Vis. Joan Alexis Glaunès, Anqi Qiu, Michael I. Miller, Laurent Younes
2008	J	`jnl`	Multi-structure network shape analysis via normal surface momentum maps. NeuroImage Anqi Qiu, Michael I. Miller
2008	J	`jnl`	Parallel transport in diffeomorphisms distinguishes the time-dependent pattern of hippocampal surface deformation due to healthy aging and the dementia of the Alzheimer's type. NeuroImage Anqi Qiu, Laurent Younes, Michael I. Miller, John G. Csernansky
2008	J	`jnl`	Semisupervised learning from dissimilarity data. Comput. Stat. Data Anal. Michael W. Trosset, Carey E. Priebe, Youngser Park, Michael I. Miller
2008	J	`jnl`	Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM template. NeuroImage Susumu Mori, Kenichi Oishi, Hangyi Jiang, Li Jiang, Xin Li, Kazi Akhter, Kegang Hua, Andreia V. Faria, Asif Mahmood, Roger P. Woods, Arthur W. Toga, G. Bruce Pike, Pedro Rosa-Neto, Alan C. Evans, Jiangyang Zhang, Hao Huang, Michael I. Miller, Peter C. M. van Zijl, John C. Mazziotta
2008	J	`jnl`	Transport of Relational Structures in Groups of Diffeomorphisms. J. Math. Imaging Vis. Laurent Younes, Anqi Qiu, Raimond L. Winslow, Michael I. Miller
2007	J	`jnl`	Combining anatomical manifold information via diffeomorphic metric mappings for studying cortical thinning of the cingulate gyrus in schizophrenia. NeuroImage Anqi Qiu, Laurent Younes, Lei Wang, J. Tilak Ratnanather, Sarah K. Gillepsie, Gillian Kaplan, John G. Csernansky, Michael I. Miller
2007	—	`conf`	Cortical Hemisphere Registration Via Large Deformation Diffeomorphic Metric Curve Mapping. MICCAI (1) Anqi Qiu, Michael I. Miller
2007	J	`jnl`	Diffeomorphic metric surface mapping in subregion of the superior temporal gyrus. NeuroImage Marc Vaillant, Anqi Qiu, Joan Alexis Glaunès, Michael I. Miller
2007	J	`jnl`	Evidence of slow maturation of the superior longitudinal fasciculus in early childhood by diffusion tensor imaging. NeuroImage Jiangyang Zhang, Alan C. Evans, Laurent Hermoye, Seung-Koo Lee, Setsu Wakana, Weihong Zhang, Pamela K. Donohue, Michael I. Miller, Hao Huang, Xiaoqing Wang, Peter C. M. van Zijl, Susumu Mori
2007	—	`conf`	Hippocampus Shape-Space Analysis of Clinically Depressed, High Risk, and Control Populations. FBIT Youngser Park, Carey E. Priebe, Kelly N. Botteron, Michael I. Miller, Nikhil R. Mohan
2007	J	`jnl`	Large Deformation Diffeomorphism and Momentum Based Hippocampal Shape Discrimination in Dementia of the Alzheimer type. IEEE Trans. Medical Imaging Lei Wang, Mirza Faisal Beg, J. Tilak Ratnanather, Can Ceritoglu, Laurent Younes, John C. Morris, John G. Csernansky, Michael I. Miller
2007	—	`conf`	Validation of Alternating Kernel Mixture Method Based Segmentation of the Human Brain. FBIT Nayoung A. Lee, Carey E. Priebe, J. Tilak Ratnanather, Michael I. Miller
2006	J	`jnl`	Abnormalities of hippocampal surface structure in very mild dementia of the Alzheimer type. NeuroImage Lei Wang, J. Philip Miller, Mokhtar H. Gado, Daniel W. McKeel, Marcus Rothermich, Michael I. Miller, John C. Morris, John G. Csernansky
2006	—	`conf`	Characterization of Mouse Brain and Its Development using Diffusion Tensor Imaging and Computational Techniques. EMBC Jiangyang Zhang, Linda J. Richards, Michael I. Miller, Paul Yarowsky, Peter C. M. van Zijl, Susumu Mori
2006	—	`conf`	Diffeomorphic Matching of Diffusion Tensor Images. CVPR Workshops Yan Cao, Michael I. Miller, Susumu Mori, Raimond L. Winslow, Laurent Younes
2006	J	`jnl`	Estimating linear cortical magnification in human primary visual cortex via dynamic programming. NeuroImage Anqi Qiu, Benjamin J. Tamber-Rosenau, Adam S. Greenberg, Monica K. Hurdal, Patrick Barta, Steven Yantis, Michael I. Miller
2006	J	`jnl`	Geodesic Shooting for Computational Anatomy. J. Math. Imaging Vis. Michael I. Miller, Alain Trouvé, Laurent Younes
2006	J	`jnl`	Segmenting magnetic resonance images via hierarchical mixture modelling. Comput. Stat. Data Anal. Carey E. Priebe, Michael I. Miller, J. Tilak Ratnanather
2006	J	`jnl`	Smooth functional and structural maps on the neocortex via orthonormal bases of the Laplace-Beltrami operator. IEEE Trans. Medical Imaging Anqi Qiu, Dmitri Bitouk, Michael I. Miller
2005	J	`jnl`	A stochastic model for studying the laminar structure of cortex from MRI. IEEE Trans. Medical Imaging Patrick Barta, Michael I. Miller, Anqi Qiu
2005	B	`conf`	Biomedical Informatics Research Network: Integrating Multi-Site Neuroimaging Data Acquisition, Data Sharing and Brain Morphometric Processing. CBMS Jorge Jovicich, Mirza Faisal Beg, Steve Pieper, Carey E. Priebe, Michael I. Miller, Randy L. Buckner, Bruce R. Rosen
2005	J	`jnl`	Clutter Invariant ATR. IEEE Trans. Pattern Anal. Mach. Intell. Dmitri Bitouk, Michael I. Miller, Laurent Younes
2005	—	`conf`	Computational Anatomy for Generating 3D Avatars and Boosting Face Recognition Systems. CVPR Workshops Marc Vaillant, G. Zang, J. Aliperti, N. Santhanam, S. Doucette, B. Hoffman, Michael I. Miller
2005	J	`jnl`	Computing Large Deformation Metric Mappings via Geodesic Flows of Diffeomorphisms. Int. J. Comput. Vis. Mirza Faisal Beg, Michael I. Miller, Alain Trouvé, Laurent Younes
2005	J	`jnl`	DTI tractography based parcellation of white matter: Application to the mid-sagittal morphology of corpus callosum. NeuroImage Hao Huang, Jiangyang Zhang, Hangyi Jiang, Setsu Wakana, Lidia Poetscher, Michael I. Miller, Peter C. M. van Zijl, Argye E. Hillis, Robert Wytik, Susumu Mori
2005	A*	`conf`	Large Deformation Diffeomorphic Metric Mapping of Fiber Orientations. ICCV Yan Cao, Michael I. Miller, Raimond L. Winslow, Laurent Younes
2005	J	`jnl`	Large deformation diffeomorphic metric mapping of vector fields. IEEE Trans. Medical Imaging Yan Cao, Michael I. Miller, Raimond L. Winslow, Laurent Younes
2005	J	`jnl`	Mapping postnatal mouse brain development with diffusion tensor microimaging. NeuroImage Jiangyang Zhang, Michael I. Miller, Celine Plachez, Linda J. Richards, Paul Yarowsky, Peter C. M. van Zijl, Susumu Mori
2005	J	`jnl`	Preclinical detection of Alzheimer's disease: hippocampal shape and volume predict dementia onset in the elderly. NeuroImage John G. Csernansky, Lei Wang, Jeffrey S. Swank, J. Philip Miller, Mokhtar H. Gado, Daniel W. McKeel, Michael I. Miller, John C. Morris
2005	A	`conf`	Semi-automated Basal Ganglia Segmentation Using Large Deformation Diffeomorphic Metric Mapping. MICCAI Ali R. Khan, Elizabeth H. Aylward, Patrick Barta, Michael I. Miller, Mirza Faisal Beg
2004	J	`jnl`	Landmark Matching via Large Deformation Diffeomorphisms on the Sphere. J. Math. Imaging Vis. Joan Alexis Glaunès, Marc Vaillant, Michael I. Miller
2003	J	`jnl`	Changes in hippocampal volume and shape across time distinguish dementia of the Alzheimer type from healthy aging☆. NeuroImage Lei Wang, Jeffrey S. Swank, Irena E. Glick, Mokhtar H. Gado, Michael I. Miller, John C. Morris, John G. Csernansky
2003	J	`jnl`	Dynamic programming generation of boundaries of local coordinatized submanifolds in the neocortex: application to the planum temporale. NeuroImage J. Tilak Ratnanather, Patrick Barta, N. A. Honeycutt, Nayoung A. Lee, H. M. Morris, A. C. Dziorny, Monica K. Hurdal, Godfrey D. Pearlson, Michael I. Miller
2003	B	`conf`	Semi-automated segmentation of cortical subvolumes via hierarchical mixture modeling. Image Processing J. Tilak Ratnanather, Carey E. Priebe, Michael I. Miller
2003	—	`conf`	The Euler-Lagrange Equation for Interpolating Sequence of Landmark Datasets. MICCAI (2) Mirza Faisal Beg, Michael I. Miller, Alain Trouvé, Laurent Younes
2003	—	`conf`	The metric spaces, Euler equations, and normal geodesic image motions of computational anatomy. ICIP (2) Michael I. Miller, Alain Trouvé, Laurent Younes
2002	—	`conf`	Computational anatomy: computing metrics on anatomical shapes. ISBI Mirza Faisal Beg, Michael I. Miller, Alain Trouvé, Laurent Younes
2002	J	`jnl`	Information-Theoretic Bounds on Target Recognition Performance Based on Degraded Image Data. IEEE Trans. Pattern Anal. Mach. Intell. Avinash Jain, Pierre Moulin, Michael I. Miller, Kannan Ramchandran
2001	J	`jnl`	Group Actions, Homeomorphisms, and Matching: A General Framework. Int. J. Comput. Vis. Michael I. Miller, Laurent Younes
2001	—	`ch.`	Monte Carlo Techniques for Automated Target Recognition. Sequential Monte Carlo Methods in Practice Anuj Srivastava, Aaron D. Lanterman, Ulf Grenander, Marc Loizeaux, Michael I. Miller
2001	J	`jnl`	Statistical Analysis of Hippocampal Asymmetry in Schizophrenia. NeuroImage Lei Wang, Sarang C. Joshi, Michael I. Miller, John G. Csernansky
2001	J	`jnl`	Validating Cortical Surface Analysis of Medial Prefrontal Cortex. NeuroImage J. Tilak Ratnanather, Kelly N. Botteron, T. Nishino, Allan B. Massie, Rakesh M. Lal, S. G. Patel, S. Peddi, R. D. Todd, Michael I. Miller
2000	J	`jnl`	Asymptotic performance analysis of Bayesian target recognition. IEEE Trans. Inf. Theory Ulf Grenander, Anuj Srivastava, Michael I. Miller
2000	J	`jnl`	Bayesian Segmentation via Asymptotic Partition Functions. IEEE Trans. Pattern Anal. Mach. Intell. Aaron D. Lanterman, Ulf Grenander, Michael I. Miller
2000	J	`jnl`	Information measures for object recognition accommodating signature variability. IEEE Trans. Inf. Theory H. L. Cooper, Michael I. Miller
2000	J	`jnl`	Landmark matching via large deformation diffeomorphisms. IEEE Trans. Image Process. Sarang C. Joshi, Michael I. Miller
2000	J	`jnl`	Rate-distortion theory applied to automatic object recognition. IEEE Trans. Inf. Theory Eli Shusterman, Michael I. Miller, Bixio Rimoldi
1999	B	`conf`	Landmark matching on brain surfaces via large deformation diffeomorphisms on the sphere. Image Processing Muge M. Bakircioglu, Sarang C. Joshi, Michael I. Miller
1998	J	`jnl`	Dynamic Programming Generation of Curves on Brain Surfaces. IEEE Trans. Pattern Anal. Mach. Intell. Navin Khaneja, Michael I. Miller, Ulf Grenander
1998	J	`jnl`	Hilbert-Schmidt Lower Bounds for Estimators on Matrix Lie Groups for ATR. IEEE Trans. Pattern Anal. Mach. Intell. Ulf Grenander, Michael I. Miller, Anuj Srivastava
1997	J	`jnl`	Automatic target recognition organized via jump-diffusion algorithms. IEEE Trans. Image Process. Michael I. Miller, Ulf Grenander, Joseph A. O'Sullivan, Donald L. Snyder
1997	—	`conf`	Gaussian Random Fields on Sub-Manifolds for Characterizing Brain Surfaces. IPMI Sarang C. Joshi, Ayananshu Banerjee, Gary E. Christensen, John G. Csernansky, John W. Haller, Michael I. Miller, Lei E. Wang
1997	J	`jnl`	On The Geometry and Shape of Brain Sub-Manifolds. Int. J. Pattern Recognit. Artif. Intell. Sarang C. Joshi, Michael I. Miller, Ulf Grenander
1997	J	`jnl`	Volumetric Transformation of Brain Anatomy. IEEE Trans. Medical Imaging Gary E. Christensen, Sarang C. Joshi, Michael I. Miller
1996	J	`jnl`	Deformable templates using large deformation kinematics. IEEE Trans. Image Process. Gary E. Christensen, Richard D. Rabbitt, Michael I. Miller
1996	—	`conf`	Individualizing Anatomical Atlases of the Head. VBC Gary E. Christensen, Sarang C. Joshi, Michael I. Miller
1996	J	`jnl`	Individualizing Neuroanatomic Atlases Using a Massively Parallel Computer. Computer Gary E. Christensen, Michael I. Miller, Michael W. Vannier, Ulf Grenander
1995	J	`jnl`	Conditional-mean estimation via jump-diffusion processes in multiple target tracking/recognition. IEEE Trans. Signal Process. Michael I. Miller, Anuj Srivastava, Ulf Grenander
1995	J	`jnl`	Multiple target direction of arrival tracking. IEEE Trans. Signal Process. Anuj Srivastava, Michael I. Miller, Ulf Grenander
1995	J	`jnl`	Parallel algorithms for maximum a posteriori estimation of spin density and spin-spin decay in magnetic resonance imaging. IEEE Trans. Medical Imaging Timothy J. Schaewe, Michael I. Miller
1994	J	`jnl`	Maximum-likelihood estimation of complex sinusoids and Toeplitz covariances. IEEE Trans. Signal Process. Michael J. Turmon, Michael I. Miller
1993	J	`jnl`	3-D maximum a posteriori estimation for single photon emission computed tomography on massively-parallel computers. IEEE Trans. Medical Imaging Michael I. Miller, Christopher S. Butler
1993	J	`jnl`	Large deviations for coding Markov chains and Gibbs random fields. IEEE Trans. Inf. Theory Yali Amit, Michael I. Miller
1993	J	`jnl`	Maximum a posteriori estimation for SPECT using regularization techniques on massively parallel computers. IEEE Trans. Medical Imaging Christopher S. Butler, Michael I. Miller
1992	J	`jnl`	Combining stochastic and syntactic processing with analog computation methods. Digit. Signal Process. Badrinath Roysam, Michael I. Miller
1992	J	`jnl`	Entropies and combinatorics of random branching processes and context-free languages. IEEE Trans. Inf. Theory Michael I. Miller, Joseph A. O'Sullivan
1992	J	`jnl`	Large deviations for the asymptotics of Ziv-Lempel codes for 2-D Gibbs fields. IEEE Trans. Inf. Theory Yali Amit, Michael I. Miller
1991	J	`jnl`	Representing and computing regular languages on massively parallel networks. IEEE Trans. Neural Networks Michael I. Miller, Badrinath Roysam, Kurt R. Smith, Joseph A. O'Sullivan
1990	Misc	`conf`	A Bayesian approach incorporating Rissanen complexity for learning Markov random field texture models. ICASSP Kurt R. Smith, Michael I. Miller
1990	J	`jnl`	Maximum-likelihood narrow-band direction finding and the EM algorithm. IEEE Trans. Acoust. Speech Signal Process. Michael I. Miller, Daniel R. Fuhrmann
1990	Misc	`conf`	Stochastic representation of memoryless Boolean functions: application to boundary estimation at low contrast. ICASSP Badrinath Roysam, Michael I. Miller
1989	Misc	`conf`	A unified approach for hierarchical imaging based on joint hypothesis testing and parameter estimation. ICASSP Badrinath Roysam, Michael I. Miller
1989	—	`conf`	Bayesian Inference of Regular Grammar and Markov Source Models. NIPS Kurt R. Smith, Michael I. Miller
1989	Misc	`conf`	Learning regular grammars on connection architectures. ICASSP Kurt R. Smith, Michael I. Miller
1989	J	`jnl`	The use of maximum likelihood estimation for forming images of diffuse radar targets from delay-Doppler data. IEEE Trans. Inf. Theory Donald L. Snyder, Joseph A. O'Sullivan, Michael I. Miller
1988	Misc	`conf`	Bayesian imaging using Good's roughness measure-implementation on a massively parallel processor. ICASSP Badrinath Roysam, Jay A. Shrauner, Michael I. Miller
1988	J	`jnl`	On the existence of positive-definite maximum-likelihood estimates of structured covariance matrices. IEEE Trans. Inf. Theory Daniel R. Fuhrmann, Michael I. Miller
1987	J	`jnl`	The role of likelihood and entropy in incomplete-data problems: Applications to estimating point-process intensities and toeplitz constrained covariances. Proc. IEEE Michael I. Miller, Donald L. Snyder