Michael G. Katze

14 papers B 1Journal 13
YearRankTypeTitle / Venue / Authors
2016 J jnl
The effect of inhibition of PP1 and TNFα signaling on pathogenesis of SARS coronavirus.
BMC Syst. Biol.
Jason E. McDermott, Hugh D. Mitchell, Lisa E. Gralinski, Amie J. Eisfeld, Laurence Josset, Armand Bankhead III, Gabriele Neumann, Susan C. Tilton, Alexandra Schäfer, Chengjun Li, Shufang Fan, Shannon K. McWeeney, Ralph S. Baric, Michael G. Katze, Katrina M. Waters
2015 J jnl
Tissue-specific transcriptome sequencing analysis expands the non-human primate reference transcriptome resource (NHPRTR).
Nucleic Acids Res.
Xinxia Peng, Jean Thierry-Mieg, Danielle Thierry-Mieg, Andrew Nishida, Lenore Pipes, Marjan Bozinoski, Matthew J. Thomas, Sara Kelly, Jeffrey M. Weiss, Muthuswamy Raveendran, Donna M. Muzny, Richard A. Gibbs, Jeffrey Rogers, Gary P. Schroth, Michael G. Katze, Christopher E. Mason
2014 J jnl
Enabling large-scale next-generation sequence assembly with Blacklight.
Concurr. Comput. Pract. Exp.
M. Brian Couger, Lenore Pipes, Fabio Squina, Rolf Prade, Adam C. Siepel, Robert Palermo, Michael G. Katze, Christopher E. Mason, Philip D. Blood
2013 J jnl
Protein co-expression network analysis (ProCoNA).
J. Clin. Bioinform.
David L. Gibbs, Arie Baratt, Ralph S. Baric, Yoshihiro Kawaoka, Richard D. Smith, Eric S. Orwoll, Michael G. Katze, Shannon K. McWeeney
2013 J jnl
Specific mutations in H5N1 mainly impact the magnitude and velocity of the host response in mice.
BMC Syst. Biol.
Nicolas Tchitchek, Amie J. Eisfeld, Jennifer Tisoncik-Go, Laurence Josset, Lisa E. Gralinski, Christophe Bécavin, Susan C. Tilton, Bobbie-Jo M. Webb-Robertson, Martin T. Ferris, Allison L. Totura, Chengjun Li, Gabriele Neumann, Thomas O. Metz, Richard D. Smith, Katrina M. Waters, Ralph S. Baric, Yoshihiro Kawaoka, Michael G. Katze
2013 J jnl
The non-human primate reference transcriptome resource (NHPRTR) for comparative functional genomics.
Nucleic Acids Res.
Lenore Pipes, Sheng Li, Marjan Bozinoski, Robert Palermo, Xinxia Peng, Philip D. Blood, Sara Kelly, Jeffrey M. Weiss, Jean Thierry-Mieg, Danielle Thierry-Mieg, Paul Zumbo, Ronghua Chen, Gary P. Schroth, Christopher E. Mason, Michael G. Katze
2012 J jnl
A new approach to bias correction in RNA-Seq.
Bioinform.
Daniel C. Jones, Walter L. Ruzzo, Xinxia Peng, Michael G. Katze
2012 J jnl
Compression of next-generation sequencing reads aided by highly efficient de novo assembly
CoRR
Daniel C. Jones, Walter L. Ruzzo, Xinxia Peng, Michael G. Katze
2012 B conf
Network-Based Prediction and Analysis of HIV Dependency Factors.
RECOMB
T. M. Murali, Matthew D. Dyer, David Badger, Brett M. Tyler, Michael G. Katze
2012 J jnl
Topological analysis of protein co-abundance networks identifies novel host targets important for HCV infection and pathogenesis.
BMC Syst. Biol.
Jason E. McDermott, Deborah L. Diamond, Courtney D. Corley, Angela L. Rasmussen, Michael G. Katze, Katrina M. Waters
2011 J jnl
A chemokine gene expression signature derived from meta-analysis predicts the pathogenicity of viral respiratory infections.
BMC Syst. Biol.
Stewart T. Chang, Nicolas Tchitchek, Debashis Ghosh, Arndt Benecke, Michael G. Katze
2011 J jnl
Conserved host response to highly pathogenic avian influenza virus infection in human cell culture, mouse and macaque model systems.
BMC Syst. Biol.
Jason E. McDermott, Harish Shankaran, Amie J. Eisfeld, Sarah E. Belisle, Gabriele Neumann, Chengjun Li, Shannon K. McWeeney, Carol Sabourin, Yoshihiro Kawaoka, Michael G. Katze, Katrina M. Waters
2011 J jnl
Network-Based Prediction and Analysis of HIV Dependency Factors.
PLoS Comput. Biol.
T. M. Murali, Matthew D. Dyer, David Badger, Brett M. Tyler, Michael G. Katze
2008 J jnl
MAID : An effect size based model for microarray data integration across laboratories and platforms.
BMC Bioinform.
Ivan Borozan, Limin Chen, Bryan Paeper, Jenny E. Heathcote, Aled M. Edwards, Michael G. Katze, Zhaolei Zhang, Ian D. McGilvray