Michael E. Matheny

103 papers C 1Misc 47Journal 48Unranked 7

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	A machine learning framework to adjust for learning effects in medical device safety evaluation. J. Am. Medical Informatics Assoc. Jejo D. Koola, Karthik Ramesh, Jialin Mao, Minyoung Ahn, Sharon E. Davis, Usha Govindarajulu, Amy Perkins, Dax M. Westerman, Henry Ssemaganda, Theodore Speroff, Lucila Ohno-Machado, Craig Ramsay, Art Sedrakyan, Frederic S. Resnic, Michael E. Matheny
2025	J	`jnl`	Detecting Opioid Use Disorder in Health Claims Data With Positive Unlabeled Learning. IEEE J. Biomed. Health Informatics Praveen Kumar, Fariha Moomtaheen, Scott A. Malec, Jeremy J. Yang, Cristian Bologa, Kristan Alexander Schneider, Yiliang Zhu, Mauricio Tohen, Gerardo Villarreal, Douglas J. Perkins, Elliot M. Fielstein, Sharon E. Davis, Michael E. Matheny, Christophe G. Lambert
2025	J	`jnl`	Emerging algorithmic bias: fairness drift as the next dimension of model maintenance and sustainability. J. Am. Medical Informatics Assoc. Sharon E. Davis, Chad Dorn, Daniel J. Park, Michael E. Matheny
2025	J	`jnl`	Large Language Models in Healthcare. CoRR Mohammed Ali Al-Garadi, Tushar Mungle, Abdulaziz Ahmed, Abeed Sarker, Zhuqi Miao, Michael E. Matheny
2025	J	`jnl`	Unlocking efficiency in real-world collaborative studies: a multi-site international study with one-shot lossless GLMM algorithm. npj Digit. Medicine Jiayi Tong, Jenna Marie Reps, Chongliang Luo, Yiwen Lu, Lu Li, Juan Manuel Ramírez-Anguita, Milou T. Brand, Scott L. DuVall, Thomas Falconer, Alex Mayer Fuentes, Xing He, Michael E. Matheny, Miguel A. Mayer, Bhavnisha K. Patel, Katherine Simon, Marc A. Suchard, Guojun Tang, Benjamin Viernes, Ross D. Williams, Mui Van Zandt, Fei Wang, Jiang Bian, Jiayu Zhou, David A. Asch, Yong Chen
2024	C	`conf`	Robin Hood: A De-identification Method to Preserve Minority Representation for Disparities Research. PSD James Thomas Brown, Ellen Wright Clayton, Michael E. Matheny, Murat Kantarcioglu, Yevgeniy Vorobeychik, Bradley A. Malin
2024	J	`jnl`	Sustainable deployment of clinical prediction tools - a 360° approach to model maintenance. J. Am. Medical Informatics Assoc. Sharon E. Davis, Peter J. Embí, Michael E. Matheny
2023	J	`jnl`	A framework for understanding label leakage in machine learning for health care. J. Am. Medical Informatics Assoc. Sharon E. Davis, Michael E. Matheny, Suresh Balu, Mark P. Sendak
2023	J	`jnl`	Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions. J. Am. Medical Informatics Assoc. Tsung-Ting Kuo, Anh Pham, Maxim E. Edelson, Jihoon Kim, Jason Chan, Yash Gupta, Lucila Ohno-Machado, David M. Anderson, Chandrasekar Balacha, Tyler Bath, Sally L. Baxter, Andrea Becker-Pennrich, Douglas S. Bell, Elmer V. Bernstam, Ngan Chau, Michele E. Day, Jason N. Doctor, Scott L. DuVall, Robert El-Kareh, Renato Florian, Robert W. Follett, Benjamin P. Geisler, Alessandro Ghigi, Assaf Gottlieb, Ludwig Christian G. Hinske, Zhaoxian Hu, Diana Ir, Xiaoqian Jiang, Katherine K. Kim, Tara K. Knight, Jejo D. Koola, Nelson Lee, Ulrich Mansmann, Michael E. Matheny, Daniella Meeker, Zongyang Mou, Larissa Neumann, Nghia H. Nguyen, Nick Anderson, Eunice Park, Paulina Paul, Mark J. Pletcher, Kai W. Post, Clemens Rieder, Clemens Scherer, Lisa M. Schilling, Andrey Soares, Spencer L. SooHoo, Ekin Soysal, Steven Covington, Brian Tep, Brian Toy, Baocheng Wang, Zhen R. Wu, Hua Xu, Yong K. Choi, Kai Zheng, Yujia Zhou, Rachel A Zucker
2023	J	`jnl`	Inpatient nurses' preferences and decisions with risk information visualization. J. Am. Medical Informatics Assoc. Alvin D. Jeffery, Carrie Reale, Janelle Faiman, Vera Borkowski, Russ Beebe, Michael E. Matheny, Shilo Anders
2023	—	`conf`	Toward Real-World Reproducibility: Verifying Value Sets for Clinical Research. MedInfo Scott L. DuVall, Craig G. Parker, Amanda R. Shields, Patrick R. Alba, Julie A. Lynch, Michael E. Matheny, Aaron W. C. Kamauu
2022	Misc	`conf`	A Framework for Detecting Medical Device Safety Signals Confounded by Learning Effects Using Machine Learning. AMIA Jejo D. Koola, Jialin Mao, Sharon E. Davis, Henry Ssemaganda, Dax M. Westerman, Lucila Ohno-Machado, Frederic S. Resnic, Michael E. Matheny
2022	Misc	`conf`	A Framework for Generating Synthetic Clinical Datasets with Learning Effects to Support Methods Development and Validation. AMIA Sharon E. Davis, Henry Ssemaganda, Jejo Koola, Jialin Mao, Dax M. Westerman, Theodore Speroff, Usha Govindarajulu, Craig Ramsay, Lucila Ohno-Machado, Frederic S. Resnic, Michael E. Matheny
2022	Misc	`conf`	AUTO-PILOT: Development and Validation of a Tool to Extract Structured Data in Interfacility Transfer Paperwork. AMIA Jesse O. Wrenn, Sara Lin, Jin Han, Ruth Reeves, Dax M. Westerman, Michael E. Matheny, Michael J. Ward
2022	Misc	`conf`	Can Data Science Move Medical Device Surveillance Forward? Highlights of Solutions and Remaining Challenges in Real-World Evidence Generation. AMIA Michael E. Matheny, Art Sedrakyan, Omar Badawi, Danica Marinac-Dabic, Frederic S. Resnic
2022	Misc	`conf`	Disentangling and Characterizing Device Safety Signals and Learning Effects. AMIA Henry Ssemaganda, Frederic S. Resnic, Sharon E. Davis, Usha Govindarajulu, Jejo Koola, Jialin Mao, Dax M. Westerman, Theodore Speroff, Craig Ramsay, Art Sedrakyan, Lucila Ohno-Machado, Michael E. Matheny
2022	J	`jnl`	Open questions and research gaps for monitoring and updating AI-enabled tools in clinical settings. Frontiers Digit. Health Sharon E. Davis, Colin G. Walsh, Michael E. Matheny
2021	J	`jnl`	Adaptation of an NLP system to a new healthcare environment to identify social determinants of health. J. Biomed. Informatics Ruth M. Reeves, Lee M. Christensen, Jeremiah R. Brown, Michael Conway, Maxwell Levis, Glenn T. Gobbel, Rashmee U. Shah, Christine Goodrich, Iben Ricket, Freneka F. Minter, Andrew Bohm, Bruce E. Bray, Michael E. Matheny, Wendy W. Chapman
2021	J	`jnl`	Broadening the reach of the FDA Sentinel system: A roadmap for integrating electronic health record data in a causal analysis framework. npj Digit. Medicine Rishi J. Desai, Michael E. Matheny, Kevin Johnson, Keith Marsolo, Lesley H. Curtis, Jennifer C. Nelson, Patrick J. Heagerty, Judith C. Maro, Jeffrey S. Brown, Sengwee Toh, Michael D. Nguyen, Robert Ball, Gerald J. Dal Pan, Shirley V. Wang, Joshua J. Gagne, Sebastian Schneeweiss
2021	Misc	`conf`	Disparities in Coded and Imputed Post-Traumatic Stress Disorder and Self-Harm Among US Veterans. AMIA Sharon E. Davis, Praveen Kumar, Nicolas R. Lauve, Sharidan K. Parr, Daniel Park, Michael E. Matheny, Gerardo Villarreal, George Uhl, Yiliang Zhu, Mauricio Tohen, Douglas J. Perkins, Christophe G. Lambert
2021	J	`jnl`	Enhancing trust in AI through industry self-governance. J. Am. Medical Informatics Assoc. Joachim Roski, Ezekiel J. Maier, Kevin Vigilante, Elizabeth A. Kane, Michael E. Matheny
2021	Misc	`conf`	Intrinsic Evaluation of Contextual and Non-contextual Word Embeddings using Radiology Reports. AMIA Mirza S. Khan, Bennett A. Landman, Stephen A. Deppen, Michael E. Matheny
2021	J	`jnl`	Privacy-protecting, reliable response data discovery using COVID-19 patient observations. J. Am. Medical Informatics Assoc. Jihoon Kim, Larissa Neumann, Paulina Paul, Michele E. Day, Michael Aratow, Douglas S. Bell, Jason N. Doctor, Ludwig Christian G. Hinske, Xiaoqian Jiang, Katherine K. Kim, Michael E. Matheny, Daniella Meeker, Mark J. Pletcher, Lisa M. Schilling, Spencer L. SooHoo, Hua Xu, Kai Zheng, Lucila Ohno-Machado
2020	Misc	`conf`	A Surveillance Framework for Monitoring and Updating Clinical Prediction Models. AMIA Sharon E. Davis, Robert A. Greevy Jr., Thomas A. Lasko, Colin G. Walsh, Michael E. Matheny
2020	J	`jnl`	COVID-19 TestNorm: A tool to normalize COVID-19 testing names to LOINC codes. J. Am. Medical Informatics Assoc. Xiao Dong, Jianfu Li, Ekin Soysal, Jiang Bian, Scott L. DuVall, Elizabeth Hanchrow, Hongfang Liu, Kristine E. Lynch, Michael E. Matheny, Karthik Natarajan, Lucila Ohno-Machado, Serguei Pakhomov, Ruth Madeleine Reeves, Amy M. Sitapati, Swapna Abhyankar, Theresa Cullen, Jami Deckard, Xiaoqian Jiang, Robert Murphy, Hua Xu
2020	J	`jnl`	Detection of calibration drift in clinical prediction models to inform model updating. J. Biomed. Informatics Sharon E. Davis, Robert A. Greevy Jr., Thomas A. Lasko, Colin G. Walsh, Michael E. Matheny
2020	J	`jnl`	Efficient determination of equivalence for encrypted data. Comput. Secur. Jason N. Doctor, Jaideep Vaidya, Xiaoqian Jiang, Shuang Wang, Lisa M. Schilling, Toan Ong, Michael E. Matheny, Lucila Ohno-Machado, Daniella Meeker
2020	Misc	`conf`	Pain Management Collaboratory Coordinating Center (PMC3): Insights from Multiple Work Groups for Clinical Research Informatics Support. AMIA Michael E. Matheny, Stephen L. Luther, William T. Roddy, Cynthia Brandt, Joseph J. Erdos
2019	—	`conf`	A Tale of Two Databases: The DoD and VA Infrastructure for Clinical Intelligence (DaVINCI). MedInfo Scott L. DuVall, Michael E. Matheny, Ildar R. Ibragimov, Trey D. Oats, Jay N. Tucker, Brett R. South, Augie Turano, Hamid Saoudian, Casey Kangas, Keith D. Hofmann, Wendy Funk, Chris Nichols, Albert Bonnema, Louis Ferrucci, Jonathan R. Nebeker
2019	J	`jnl`	A nonparametric updating method to correct clinical prediction model drift. J. Am. Medical Informatics Assoc. Sharon E. Davis, Robert A. Greevy Jr., Christopher Fonnesbeck, Thomas A. Lasko, Colin G. Walsh, Michael E. Matheny
2019	Misc	`conf`	Comparison of Prediction Model Performance Updating Protocols: Using a Data-Driven Testing Procedure to Guide Updating. AMIA Sharon E. Davis, Robert A. Greevy Jr., Thomas A. Lasko, Colin G. Walsh, Michael E. Matheny
2019	Misc	`conf`	Developing Synthetic VA Healthcare Data in OMOP CDM Model. AMIA Jiantao Bian, Hamid Saoudian, Brett R. South, Kristine E. Lynch, Benjamin Viernes, Michael E. Matheny, Scott L. DuVall
2019	J	`jnl`	Explicit causal reasoning is preferred, but not necessary for pragmatic value. J. Am. Medical Informatics Assoc. Matthew C. Lenert, Michael E. Matheny, Colin G. Walsh
2019	J	`jnl`	Incrementally Transforming Electronic Medical Records into the Observational Medical Outcomes Partnership Common Data Model: A Multidimensional Quality Assurance Approach. Appl. Clin. Inform. Kristine E. Lynch, Stephen A. Deppen, Scott L. DuVall, Benjamin Viernes, Aize Cao, Daniel Park, Elizabeth Hanchrow, Kushan Hewa, Peter Greaves, Michael E. Matheny
2019	Misc	`conf`	Longitudinal modeling of prescription refill records to predict medication use. AMIA Kimberley Kondratieff, Candace D. McNaughton, Michael E. Matheny, Thomas A. Lasko
2019	Misc	`conf`	Mapping Medications to Standards with Machine Learning and Noisy Labels. AMIA Alvin D. Jeffery, Sharidan K. Parr, Michael E. Matheny
2019	J	`jnl`	Prognostic models will be victims of their own success, unless... J. Am. Medical Informatics Assoc. Matthew C. Lenert, Michael E. Matheny, Colin G. Walsh
2019	Misc	`conf`	Value Set Development for Studies Involving Historical Data. AMIA Kristin Lyman, Melanie Canterberry, Elizabeth Crull, Jason Denton, Fern FitzHenry, Qiaohong Hu, Sharidan K. Parr, Amy Perkins, Dina Zein, Michael E. Matheny, Jason N. Doctor, Daniella Meeker
2018	Misc	`conf`	Annotating Social Determinants of Health and Functional Status Information Using Publicly Accessible Corpora. AMIA Ruth M. Reeves, Brett R. South, Glenn T. Gobbel, Lee M. Christensen, Paul Thompson, Wendy W. Chapman, Michael E. Matheny, Jeremiah R. Brown
2018	J	`jnl`	Application of contextual design methods to inform targeted clinical decision support interventions in sub-specialty care environments. Int. J. Medical Informatics Anne Miller, Jejo D. Koola, Michael E. Matheny, Julie Ducom, Jason M. Slagle, Erik Groessl, Freneka F. Minter, Jennifer H. Garvin, Matthew B. Weinger, Samuel B. Ho
2018	Misc	`conf`	Automated Mapping of Laboratory Tests to LOINC Codes using Noisy Labels in a National Electronic Health Record System Database. AMIA Sharidan K. Parr, Thomas A. Lasko, Alvin D. Jeffery, Matthew S. Shotwell, Michael E. Matheny
2018	J	`jnl`	Automated mapping of laboratory tests to LOINC codes using noisy labels in a national electronic health record system database. J. Am. Medical Informatics Assoc. Sharidan K. Parr, Matthew S. Shotwell, Alvin D. Jeffery, Thomas A. Lasko, Michael E. Matheny
2018	Misc	`conf`	Developing a Testing Procedure to Select Model Updating Methods. AMIA Sharon E. Davis, Robert A. Greevy Jr., Michael E. Matheny
2018	J	`jnl`	Development of an automated phenotyping algorithm for hepatorenal syndrome. J. Biomed. Informatics Jejo D. Koola, Sharon E. Davis, Omar Al-Nimri, Sharidan K. Parr, Daniel Fabbri, Bradley A. Malin, Samuel B. Ho, Michael E. Matheny
2018	J	`jnl`	Efficient Determination of Equivalence for Encrypted Data. CoRR Jason N. Doctor, Jaideep Vaidya, Xiaoqian Jiang, Shuang Wang, Lisa M. Schilling, Toan Ong, Michael E. Matheny, Lucila Ohno-Machado, Daniella Meeker
2018	Misc	`conf`	Flipping the Model for Biomedical Informatics Research. AMIA Brett R. South, Kristine W. Lynch, Michael E. Matheny, Julie A. Lynch, Olga Efimova, Catherine Chanfreau-Coffinier, Olga V. Patterson, Benjamin Viernes, Scott L. DuVall
2018	Misc	`conf`	Integrating Cancer Genomic Data into Decision Support at the VA: Hematologic Oncology as a Use Case. AMIA Dax M. Westerman, Fern FitzHenry, Michael E. Matheny, Michele L. LeNoue-Newton, Claudio A. Mosse, Ian Maurer, Matthew Stachowiak, Justin A. Yeakley, James Cole, Regina M. Thomas, Mia A. Levy
2018	J	`jnl`	Perfectly Secure and Efficient Two-Party Electronic-Health-Record Linkage. IEEE Internet Comput. Feng Chen, Xiaoqian Jiang, Shuang Wang, Lisa M. Schilling, Daniella Meeker, Toan Ong, Michael E. Matheny, Jason N. Doctor, Lucila Ohno-Machado, Jaideep Vaidya
2018	Misc	`conf`	The Department of Defense (DoD) and Department of Veterans Affairs (VA) Infrastructure for Clinical Intelligence (DaVINCI). AMIA Scott L. DuVall, Michael E. Matheny, Ildar R. Ibragimov, Trey D. Oats, Jay N. Tucker, Brett R. South, Augie Turano, Hamid Saoudian, Casey Kangas, Keith D. Hofmann, Wendy Funk, Chris Nichols, Albert Bonnema, Louis Ferrucci, Jonathan R. Nebeker
2017	Misc	`conf`	Calibration Drift Among Regression and Machine Learning Models for Hospital Mortality. AMIA Sharon E. Davis, Thomas A. Lasko, Guanhua Chen, Michael E. Matheny
2017	J	`jnl`	Calibration drift in regression and machine learning models for acute kidney injury. J. Am. Medical Informatics Assoc. Sharon E. Davis, Thomas A. Lasko, Guanhua Chen, Edward D. Siew, Michael E. Matheny
2017	J	`jnl`	Congestive heart failure information extraction framework for automated treatment performance measures assessment. J. Am. Medical Informatics Assoc. Stéphane M. Meystre, Youngjun Kim, Glenn T. Gobbel, Michael E. Matheny, Andrew Redd, Bruce E. Bray, Jennifer H. Garvin
2017	—	`conf`	Heart Failure Data for Patient Treatment Goals at the Point of Care: Automated Data Extraction and Consistent Reference Standard Importance. CRI Stéphane M. Meystre, Youngjun Kim, Glenn T. Gobbel, Michael E. Matheny, Andrew Redd, Bruce E. Bray, Jennifer H. Garvin
2017	J	`jnl`	Identification of adverse drug-drug interactions through causal association rule discovery from spontaneous adverse event reports. Artif. Intell. Medicine Ruichu Cai, Mei Liu, Yong Hu, Brittany Melton, Michael E. Matheny, Hua Xu, Lian Duan, Lemuel R. Waitman
2017	Misc	`conf`	Machine Learning Models to Predict Readmission for Patients with Cirrhosis. AMIA Jejo D. Koola, Aize Cao, Guanhua Chen, Amy Perkins, Samuel B. Ho, Sharon E. Davis, Michael E. Matheny
2017	Misc	`conf`	Natural Language Data Sampling: Principles & Strategies in Corpus Selection. AMIA Ruth M. Reeves, Nancy H. Gentry, Fern FitzHenry, Glenn T. Gobbel, Michael E. Matheny
2017	—	`conf`	Strategic Assessment and Planning for the PCORnet Common Data Model. CRI Ania Berchuck, Michael G. Kahn, Shelley A. Rusincovitch, Daniella Meeker, Shawn N. Murphy, Ravi Bhosale, Keith Marsolo, Michael E. Matheny, L. Russell Waitman, Rachel Hess
2017	J	`jnl`	The Building Blocks of Inter-operability. Appl. Clin. Inform. Adam Culbertson, Satyender Goel, Margaret B. Madden, Niloufar Safaeinili, Kathryn L. Jackson, Thomas Carton, Russ Waitman, Mei Liu, Ashok Krishnamurthy, Lauren Hall, Nickie Cappella, Shyam Visweswaran, Michael J. Becich, Reuben J. Applegate, Elmer V. Bernstam, Russell Rothman, Michael E. Matheny, Gloria P. Lipori, Jiang Bian, William R. Hogan, Douglas S. Bell, Andrew Martin, Shaun J. Grannis, Jeffrey G. Klann, Rebecca Sutphen, Amy O'hara, Abel N. Kho
2016	Misc	`conf`	An Electronic Health Record Phenotyping Algorithm for Identifying Patients with Hepatorenal Syndrome. AMIA Jejo Koola, Samuel B. Ho, Michael E. Matheny
2016	Misc	`conf`	An Integrated Privacy Preserving Collaborative Analytics Platform: The PCORnet pSCANNER-PopMedNet TM Software Suite. AMIA Michael E. Matheny, Dax M. Westerman, Laura Pearlman, Josh Gieringer, Xiaoqian Jiang, Claudiu Farcas, Tara K. Knight, Shuang Wang, Amy Perkins, Lucila Ohno-Machado, Bill Clarke, Daniella Meeker
2016	—	`conf`	Calibration Drift of Clinical Prediction Models Across Modeling Methods. CRI Sharon E. Davis, Thomas A. Lasko, Guanhua Chen, Michael E. Matheny
2016	Misc	`conf`	Calibration of Predictive Models for Clinical Decision Making: Personalizing Prevention, Treatment, and Disease Progression. AMIA Lucila Ohno-Machado, George Hripcsak, Michael E. Matheny, Yuan Wu, Xiaoqian Jiang
2016	Misc	`conf`	Event Coreference in Support of Temporal Reasoning in Mental Health Notes. AMIA Ruth M. Reeves, Marcus Verhagen, Cynthia Brandt, Wendy W. Chapman, Michael E. Matheny, Steven H. Brown, Brian Marx, Theodore Speroff
2016	Misc	`conf`	Informatics Challenges in Working with "Big Data" - A Use Case in Identifying Predictors of Constipation. AMIA Fern FitzHenry, Svetlana K. Eden, Jason N. Denton, Robert J. LoCasale, Hui Cao, Aize Cao, Ruth M. Reeves, Nancy L. Wells, Michael E. Matheny
2016	Misc	`conf`	The Discriminative Power of Non-Specific Laboratory Results. AMIA Jacob P. VanHouten, Christopher Fonnesbeck, Michael E. Matheny, Thomas A. Lasko
2016	Misc	`conf`	Using Results of Statistical Text Mining in Big Data Analysis. AMIA Stephen L. Luther, James A. McCart, Dezon Finch, Lina Bouayad, William Lapcevic, Michael E. Matheny
2016	—	`conf`	Using a Multilayer Self-Organizing Map for Risk Prediction in Hepatorenal Syndrome. CRI Jejo D. Koola, Sharon E. Davis, Samuel B. Ho, Michael E. Matheny
2016	Misc	`conf`	Workflow-guided development of a clinical decision support tool for patients with advanced liver disease. AMIA Samuel B. Ho, Julie Ducom, Anne Miller, Jennifer H. Garvin, Jejo D. Koola, Russ Beebe, Jason M. Slagle, Dax M. Westerman, Carrie Reale, Matthew B. Weinger, Erik Groessl, Michael E. Matheny
2015	Misc	`conf`	A Novel Visualization for Rapid Summarization of Patient History: Application to Cirrhosis. AMIA Jejo Koola, Samuel B. Ho, Michael E. Matheny
2015	J	`jnl`	A system to build distributed multivariate models and manage disparate data sharing policies: implementation in the scalable national network for effectiveness research. J. Am. Medical Informatics Assoc. Daniella Meeker, Xiaoqian Jiang, Michael E. Matheny, Claudiu Farcas, Michel D'Arcy, Laura Pearlman, Lavanya Nookala, Michele E. Day, Katherine K. Kim, Hyeoneui Kim, Aziz A. Boxwala, Robert E. El-Kareh, Grace Kuo, Frederic S. Resnic, Carl Kesselman, Lucila Ohno-Machado
2015	J	`jnl`	National Veterans Health Administration inpatient risk stratification models for hospital-acquired acute kidney injury. J. Am. Medical Informatics Assoc. Robert M. Cronin, Jacob P. VanHouten, Edward D. Siew, Svetlana K. Eden, Stephan D. Fihn, Christopher D. Nielson, Josh F. Peterson, Clifton R. Baker, T. Alp Ikizler, Theodore Speroff, Michael E. Matheny
2015	Misc	`conf`	RapTAT: A Tool for Assisted Annotation and Reviewer Training via Online Machine Learning. AMIA Glenn T. Gobbel, Ruth M. Reeves, Brett R. South, Wendy W. Chapman, Jay Jarman, Steven Lay, Michael E. Matheny
2015	Misc	`conf`	Transforming the National Department of Veterans Affairs Data Warehouse to the OMOP Common Data Model. AMIA Fern FitzHenry, Jesse Brannen, Jason N. Denton, Jonathan R. Nebeker, Scott L. DuVall, Freneka F. Minter, Jeffrey Scehnet, Brian C. Sauer, Lucila Ohno-Machado, Michael E. Matheny
2014	J	`jnl`	Brief communication: pSCANNER: patient-centered Scalable National Network for Effectiveness Research. J. Am. Medical Informatics Assoc. Lucila Ohno-Machado, Zia Agha, Douglas S. Bell, Lisa Dahm, Michele E. Day, Jason N. Doctor, Davera Gabriel, Maninder K. Kahlon, Katherine K. Kim, Michael A. Hogarth, Michael E. Matheny, Daniella Meeker, Jonathan R. Nebeker
2014	J	`jnl`	Determining molecular predictors of adverse drug reactions with causality analysis based on structure learning. J. Am. Medical Informatics Assoc. Mei Liu, Ruichu Cai, Yong Hu, Michael E. Matheny, Jingchun Sun, Jun Hu, Hua Xu
2014	J	`jnl`	Development and evaluation of RapTAT: A machine learning system for concept mapping of phrases from medical narratives. J. Biomed. Informatics Glenn T. Gobbel, Ruth M. Reeves, Shrimalini Jayaramaraja, Dario A. Giuse, Theodore Speroff, Steven H. Brown, Peter L. Elkin, Michael E. Matheny
2014	Misc	`conf`	Development of a Cirrhosis-Associated Symptom/Finding Detection Tool. AMIA Jejo Koola, Robert M. Cronin, Ruth M. Reeves, Jason N. Denton, Samuel B. Ho, Michael E. Matheny
2014	J	`jnl`	Research and applications: Assisted annotation of medical free text using RapTAT. J. Am. Medical Informatics Assoc. Glenn T. Gobbel, Jennifer H. Garvin, Ruth M. Reeves, Robert M. Cronin, Julia Heavirland, Jenifer Williams, Allison Weaver, Shrimalini Jayaramaraja, Dario A. Giuse, Theodore Speroff, Steven H. Brown, Hua Xu, Michael E. Matheny
2013	J	`jnl`	Detecting temporal expressions in medical narratives. Int. J. Medical Informatics Ruth M. Reeves, Ferdo R. Ong, Michael E. Matheny, Joshua C. Denny, Dominik Aronsky, Glenn T. Gobbel, Diane Montella, Theodore Speroff, Steven H. Brown
2013	Misc	`conf`	Methods for Detection of Kidney Disease Risk Factors in Clinical Reports. AMIA Ruth M. Reeves, Glenn T. Gobbel, Shrimalini Jayaramaraja, Fern FitzHenry, Robert M. Cronin, Theodore Speroff, Michael E. Matheny
2013	Misc	`conf`	Use and Evaluation of RapTAT-Assisted Annotation for Extraction of Acute Kidney Injury Concepts from Clinical Free Text. AMIA Glenn T. Gobbel, Ruth M. Reeves, Fern FitzHenry, Diane Montella, Robert M. Cronin, Shrimalini Jayaramaraja, Theodore Speroff, Steven H. Brown, Dario A. Giuse, Michael E. Matheny
2012	Misc	`conf`	Data Harmonization Barriers for Post Marketing Surveillance of Medications. AMIA Fern FitzHenry, Frederic S. Resnic, Arijit Basu, Susan Robbins, Kenneth Nunes, Robert E. El-Kareh, Grace Kuo, Michael E. Matheny
2012	J	`jnl`	Data mining methodologies for pharmacovigilance. SIGKDD Explor. Mei Liu, Michael E. Matheny, Yong Hu, Hua Xu
2012	—	`conf`	Detecting Adverse Drug Reactions Using Inpatient Medication Orders and Laboratory Tests Data. HISB Mei Liu, Michael E. Matheny, Yonghui Wu, Eugenia R. McPeek Hinz, Joshua C. Denny, Jonathan S. Schildcrout, Randolph A. Miller, Hua Xu
2012	J	`jnl`	Detection of infectious symptoms from VA emergency department and primary care clinical documentation. Int. J. Medical Informatics Michael E. Matheny, Fern FitzHenry, Theodore Speroff, Jennifer K. Green, Michelle L. Griffith, Eduard E. Vasilevskis, Elliot M. Fielstein, Peter L. Elkin, Steven H. Brown
2012	Misc	`conf`	Developing an Integrated Temporal Reasoning System with TimeML and UMLS Concepts. AMIA Ruth M. Reeves, Zhao Zou, Glenn T. Gobbel, Shrimalini Jayaramaraja, Steven H. Brown, Michael E. Matheny, Theodore Speroff
2012	Misc	`conf`	Developing the Veterans Health Administration ETL for the OMOP Common Data Model Version 3. AMIA Lalit Nookala, Michael E. Matheny, Frederic S. Resnic, Susan Robbins, Fern FitzHenry
2012	Misc	`conf`	Evaluation of the RapTAT Automated Annotation System for Identifying Post-Traumatic Stress Disorder-Related Concepts in Clinical Notes. AMIA Glenn T. Gobbel, Ruth M. Reeves, Shrimalini Jayaramaraja, Svetlana K. Eden, Fern FitzHenry, Theodore Speroff, Steven H. Brown, Stephen Luther, Maryan Zirkle, Dezon Finch, James A. McCart, Michael E. Matheny
2012	J	`jnl`	Large-scale prediction of adverse drug reactions using chemical, biological, and phenotypic properties of drugs. J. Am. Medical Informatics Assoc. Mei Liu, Yonghui Wu, Yukun Chen, Jingchun Sun, Zhongming Zhao, Xue-wen Chen, Michael E. Matheny, Hua Xu
2012	Misc	`conf`	National Post-Marketing Surveillance of Embolic Protection Devices in the Veterans Administration CART Program. AMIA Michael E. Matheny, Fern FitzHenry, Arijit Basu, Susan Robbins, Richard Cope, Mary Plomondon, Thomas Maddox, Thomas Tsai, John Rumsfeld, Frederic S. Resnic
2012	Misc	`conf`	Who Said It? Establishing Professional Attribution among Authors of Veterans' Electronic Health Records. AMIA Ruth M. Reeves, Fern FitzHenry, Steven H. Brown, Kristen Kotter, Glenn T. Gobbel, Diane Montella, Harvey J. Murff, Theodore Speroff, Michael E. Matheny
2012	J	`jnl`	iDASH: integrating data for analysis, anonymization, and sharing. J. Am. Medical Informatics Assoc. Lucila Ohno-Machado, Vineet Bafna, Aziz A. Boxwala, Brian E. Chapman, Wendy Webber Chapman, Kamalika Chaudhuri, Michele E. Day, Claudiu Farcas, Nathaniel D. Heintzman, Xiaoqian Jiang, Hyeoneui Kim, Jihoon Kim, Michael E. Matheny, Frederic S. Resnic, Staal Amund Vinterbo
2011	J	`jnl`	Evaluation of an automated safety surveillance system using risk adjusted sequential probability ratio testing. BMC Medical Informatics Decis. Mak. Michael E. Matheny, Sharon-Lise T. Normand, Thomas P. Gross, Danica Marinac-Dabic, Nilsa Loyo-Berrios, Venkatesan D. Vidi, Sharon Donnelly, Frederic S. Resnic
2009	J	`jnl`	A comparison of methods for assessing penetrating trauma on retrospective multi-center data. J. Biomed. Informatics Bilal A. Ahmed, Michael E. Matheny, Phillip L. Rice, John R. Clarke, Omolola Ogunyemi
2009	Misc	`conf`	Detection of Blood Culture Bacterial Contamination using Natural Language Processing. AMIA Michael E. Matheny, Fern FitzHenry, Theodore Speroff, Jacob Hathaway, Harvey J. Murff, Steven H. Brown, Elliot M. Fielstein, Robert S. Dittus, Peter L. Elkin
2009	J	`jnl`	Research Paper: Impact of Non-interruptive Medication Laboratory Monitoring Alerts in Ambulatory Care. J. Am. Medical Informatics Assoc. Helen G. Lo, Michael E. Matheny, Diane L. Seger, David W. Bates, Tejal K. Gandhi
2008	J	`jnl`	Research Paper: A Randomized Trial of Electronic Clinical Reminders to Improve Medication Laboratory Monitoring. J. Am. Medical Informatics Assoc. Michael E. Matheny, Thomas D. Sequist, Andrew C. Seger, Julie M. Fiskio, Michael Sperling, Donald Bugbee, David W. Bates, Tejal K. Gandhi
2007	J	`jnl`	Effects of SVM parameter optimization on discrimination and calibration for post-procedural PCI mortality. J. Biomed. Informatics Michael E. Matheny, Frederic S. Resnic, Nipun Arora, Lucila Ohno-Machado
2007	Misc	`conf`	Rare Adverse Event Monitoring of Medical Devices with the Use of an Automated Surveillance Tool. AMIA Michael E. Matheny, Nipun Arora, Lucila Ohno-Machado, Frederic S. Resnic
2006	J	`jnl`	Research Paper: Monitoring Device Safety in Interventional Cardiology. J. Am. Medical Informatics Assoc. Michael E. Matheny, Lucila Ohno-Machado, Frederic S. Resnic
2005	J	`jnl`	Discrimination and calibration of mortality risk prediction models in interventional cardiology. J. Biomed. Informatics Michael E. Matheny, Lucila Ohno-Machado, Frederic S. Resnic
2005	Misc	`conf`	Evaluating the Discriminatory Power of a Computer-based System for Assessing Penetrating Trauma on Retrospective Multi-Center Data. AMIA Michael E. Matheny, Omolola Ogunyemi, Phillip L. Rice, John R. Clarke
2005	Misc	`conf`	Exploration of a Bayesian Updating Tool to Provide Real-Time Safety Monitoring for New Medical Devices. AMIA Michael E. Matheny, Lucila Ohno-Machado, Frederic S. Resnic