Michael B. Eisen

20 papers B 2Misc 3Journal 11Unranked 4
YearRankTypeTitle / Venue / Authors
2024 J jnl
Evolutionary analyses of intrinsically disordered regions reveal widespread signals of conservation.
PLoS Comput. Biol.
Marc D. Singleton, Michael B. Eisen
2015 J jnl
Ten Years of
PLoS Comput. Biol.
Philip E. Bourne, Steven E. Brenner, Michael B. Eisen
2010 Misc conf
Coupling visualization and data analysis for knowledge discovery from multi-dimensional scientific data.
ICCS
Oliver Rübel, Sean Ahern, E. Wes Bethel, Mark D. Biggin, Hank Childs, Estelle Cormier-Michel, Angela H. DePace, Michael B. Eisen, Charless C. Fowlkes, Cameron G. R. Geddes, Hans Hagen, Bernd Hamann, Min-Yu Huang, Soile V. E. Keränen, David W. Knowles, Cris L. Luengo Hendriks, Jitendra Malik, Jeremy S. Meredith, Peter Messmer, Prabhat
2010 J jnl
Integrating Data Clustering and Visualization for the Analysis of 3D Gene Expression Data.
IEEE ACM Trans. Comput. Biol. Bioinform.
Oliver Rübel, Gunther H. Weber, Min-Yu Huang, E. Wes Bethel, Mark D. Biggin, Charless C. Fowlkes, Cris L. Luengo Hendriks, Soile V. E. Keränen, Michael B. Eisen, David W. Knowles, Jitendra Malik, Hans Hagen, Bernd Hamann
2008 Misc conf
Use of an Evolutionary Model to Provide Evidence for a Wide Heterogenity of Required Affinities Between Transcription Factors and Their Binding Sites in Yeast.
Pacific Symposium on Biocomputing
Richard W. Lusk, Michael B. Eisen
2007 — conf
PointCloudXplore 2: Visual Exploration of 3D Gene Expression.
Visualization of Large and Unstructured Data Sets
Oliver Rübel, Gunther H. Weber, Min-Yu Huang, E. Wes Bethel, Soile V. E. Keränen, Charless C. Fowlkes, Cris L. Luengo Hendriks, Angela H. DePace, Lisa Simirenko, Michael B. Eisen, Mark D. Biggin, Hans Hagen, Jitendra Malik, David W. Knowles, Bernd Hamann
2006 — conf
Clustering gene expression patterns of fly embryos.
ISBI
Hanchuan Peng, Fuhui Long, Michael B. Eisen, Eugene W. Myers
2006 J jnl
Design of a combinatorial DNA microarray for protein-DNA interaction studies.
BMC Bioinform.
Julian Mintseris, Michael B. Eisen
2006 J jnl
Detecting the limits of regulatory element conservation and divergence estimation using pairwise and multiple alignments.
BMC Bioinform.
Daniel A. Pollard, Alan M. Moses, Venky N. Iyer, Michael B. Eisen
2006 J jnl
Large-Scale Turnover of Functional Transcription Factor Binding Sites in
PLoS Comput. Biol.
Alan M. Moses, Daniel A. Pollard, David A. Nix, Venky N. Iyer, Xiaoyong Li, Mark D. Biggin, Michael B. Eisen
2006 — conf
PointCloudXplore: A Visualization Tool for 3D Gene Expression Data.
VLUDS
Oliver Rübel, Gunther H. Weber, Soile V. E. Keränen, Charless C. Fowlkes, Cris L. Luengo Hendriks, Lisa Simirenko, Nameeta Y. Shah, Michael B. Eisen, Mark D. Biggin, Hans Hagen, Damir Sudar, Jitendra Malik, David W. Knowles, Bernd Hamann
2006 B conf
PointCloudXplore: Visual Analysis of 3D Gene Expression Data Using Physical Views and Parallel Coordinates.
EuroVis
Oliver Rübel, Gunther H. Weber, Soile V. E. Keränen, Charless C. Fowlkes, Cris L. Luengo Hendriks, Lisa Simirenko, Nameeta Y. Shah, Michael B. Eisen, Mark D. Biggin, Hans Hagen, Damir Sudar, Jitendra Malik, David W. Knowles, Bernd Hamann
2005 J jnl
GATA: a graphic alignment tool for comparative sequence analysis.
BMC Bioinform.
David A. Nix, Michael B. Eisen
2004 J jnl
Benchmarking tools for the alignment of functional noncoding DNA.
BMC Bioinform.
Daniel A. Pollard, Casey M. Bergman, Jens Stoye, Susan E. Celniker, Michael B. Eisen
2004 J jnl
Correction: Benchmarking tools for the alignment of functional noncodingDNA.
BMC Bioinform.
Daniel A. Pollard, Casey M. Bergman, Jens Stoye, Susan E. Celniker, Michael B. Eisen
2004 Misc conf
Phylogenetic Motif Detection by Expectation-Maximization on Evolutionary Mixtures.
Pacific Symposium on Biocomputing
Alan M. Moses, Derek Y. Chiang, Michael B. Eisen
2003 B conf
Phylogenetically and spatially conserved word pairs associated with gene expression changes in yeasts.
RECOMB
Derek Y. Chiang, Alan M. Moses, Manolis Kamvysselis, Eric S. Lander, Michael B. Eisen
2002 J jnl
Identification of regulatory elements using a feature selection method.
Bioinform.
Sündüz Keles, Mark J. van der Laan, Michael B. Eisen
2001 J jnl
The Stanford Microarray Database.
Nucleic Acids Res.
Gavin Sherlock, Tina Hernandez-Boussard, Andrew Kasarskis, Gail Binkley, John C. Matese, Selina S. Dwight, Miroslava Kaloper, Shuai Weng, Heng jin, Catherine A. Ball, Michael B. Eisen, Paul T. Spellman, Patrick O. Brown, David Botstein, J. Michael Cherry
2001 — conf
Visualizing associations between genome sequences and gene expression data using genome-mean expression profiles.
ISMB (Supplement of Bioinformatics)
Derek Y. Chiang, Patrick O. Brown, Michael B. Eisen