Michael A. Charleston

30 papers A 1C 3Journal 22Unranked 3
YearRankTypeTitle / Venue / Authors
2026 J jnl
A Probabilistic Algorithm for Gene-Species Reconciliation with Segmental Duplications.
J. Comput. Biol.
Yao-ban Chan, Céline Scornavacca, Michael A. Charleston
2024 J jnl
What makes a small-world network? Leveraging machine learning for the robust prediction and classification of networks.
CoRR
Raima Carol Appaw, Nicholas Fountain-Jones, Michael A. Charleston
2020 J jnl
Bioacoustics Data Analysis - A Taxonomy, Survey and Open Challenges.
IEEE Access
K. V. S. N. Rama Rao, James Montgomery, Saurabh Kumar Garg, Michael A. Charleston
2019 J jnl
Establishing a distributed national research infrastructure providing bioinformatics support to life science researchers in Australia.
Briefings Bioinform.
Maria Victoria Schneider, Philippa C. Griffin, Sonika Tyagi, Madison Flannery, Saravanan Dayalan, Simon Gladman, Nathan S. Watson-Haigh, Philipp E. Bayer, Michael A. Charleston, Ira Cooke, Rob Cook, Richard J. Edwards, David Edwards, Dominique Gorse, Malcolm J. McConville, David Powell, Marc R. Wilkins, Andrew Lonie
2019 — ch.
Molecular Phylogenetics.
Encyclopedia of Bioinformatics and Computational Biology (2)
Michael A. Charleston
2016 J jnl
Biological Network Edit Distance.
J. Comput. Biol.
Martin McGrane, Michael A. Charleston
2016 — conf
Mining autograding data in computer science education.
ACSW
Vincent Gramoli, Michael A. Charleston, Bryn Jeffries, Irena Koprinska, Martin McGrane, Alex Radu, Anastasios Viglas, Kalina Yacef
2016 J jnl
RASCAL: A Randomized Approach for Coevolutionary Analysis.
J. Comput. Biol.
Benjamin Drinkwater, Michael A. Charleston
2016 J jnl
Towards sub-quadratic time and space complexity solutions for the dated tree reconciliation problem.
Algorithms Mol. Biol.
Benjamin Drinkwater, Michael A. Charleston
2015 C conf
A Sub-quadratic Time and Space Complexity Solution for the Dated Tree Reconciliation Problem for Select Tree Topologies.
WABI
Benjamin Drinkwater, Michael A. Charleston
2015 J jnl
A time and space complexity reduction for coevolutionary analysis of trees generated under both a Yule and Uniform model.
Comput. Biol. Chem.
Benjamin Drinkwater, Michael A. Charleston
2015 J jnl
Evolving Nutritional Strategies in the Presence of Competition: A Geometric Agent-Based Model.
PLoS Comput. Biol.
Alistair M. Senior, Michael A. Charleston, Mathieu Lihoreau, Jérôme Buhl, David Raubenheimer, Stephen J. Simpson
2015 J jnl
Node Handprinting: A Scalable and Accurate Algorithm for Aligning Multiple Biological Networks.
J. Comput. Biol.
Alex Radu, Michael A. Charleston
2015 J jnl
Simple, rapid and accurate genotyping-by-sequencing from aligned whole genomes with ArrayMaker.
Bioinform.
Cali E. Willet, Bianca Haase, Michael A. Charleston, Claire M. Wade
2014 J jnl
Introducing TreeCollapse: a novel greedy algorithm to solve the cophylogeny reconstruction problem.
BMC Bioinform.
Benjamin Drinkwater, Michael A. Charleston
2014 J jnl
Node Fingerprinting: An Efficient Heuristic for Aligning Biological Networks.
J. Comput. Biol.
Alex Radu, Michael A. Charleston
2013 C conf
A conceptual model for reflecting on expected learning vs. demonstrated student performance.
ACE
Richard Gluga, Judy Kay, Raymond Lister, Simon, Michael A. Charleston, James Harland, Donna Teague
2013 J jnl
Active Subnetwork Recovery with a Mechanism-Dependent Scoring Function; with application to Angiogenesis and Organogenesis studies.
BMC Bioinform.
Ilana Lichtenstein, Michael A. Charleston, Tibério S. Caetano, Jennifer R. Gamble, Mathew A. Vadas
2011 J jnl
Verification of phylogenetic Inference Programs Using Metamorphic Testing.
J. Bioinform. Comput. Biol.
Md. Shaik Sadi, Fei-Ching Kuo, Joshua Wing Kei Ho, Michael A. Charleston, Tsong Yueh Chen
2009 J jnl
On the Computational Complexity of the Reticulate Cophylogeny Reconstruction Problem.
J. Comput. Biol.
Ran Libeskind-Hadas, Michael A. Charleston
2008 A conf
Differential variability analysis of gene expression and its application to human diseases.
ISMB
Joshua Wing Kei Ho, Maurizio Stefani, Cristobal G. dos Remedios, Michael A. Charleston
2008 J jnl
Phylogenetic estimation with partial likelihood tensors
CoRR
Jeremy G. Sumner, Michael A. Charleston
2007 C conf
A Novel Algorithm for Adaptive and Neutral Evolutionary Patterns Associated with HIV Drug Resistance.
AICCSA
Ali Al Mazari, Albert Y. Zomaya, Michael A. Charleston, Roger J. Garsia
2006 — conf
A cophylogenetic perspective on host-pathogen evolution.
Disease Evolution: Models, Concepts, and Data Analyses
Michael A. Charleston, Alison P. Galvani
2006 J jnl
Traversing the tangle: Algorithms and applications for cophylogenetic studies.
J. Biomed. Informatics
Michael A. Charleston, Susan L. Perkins
2001 J jnl
Hitch-Hiking: A Parallel Heuristic Search Strategy, Applied to the Phylogeny Problem.
J. Comput. Biol.
Michael A. Charleston
1998 J jnl
Spectrum: spectral analysis of phylogenetic data.
Bioinform.
Michael A. Charleston
1996 — conf
Reconciled trees and incongruent gene and species trees.
Mathematical Hierarchies and Biology
Roderic D. M. Page, Michael A. Charleston
1995 J jnl
Toward a Characterization of Landscapes of Combinatorial Optimization Problems, with Special Attention to the Phylogeny Problem.
J. Comput. Biol.
Michael A. Charleston
1994 J jnl
The Effects of Sequence Length, Tree Topology, and Number of Taxa on the Performance of Phylogenetic Methods.
J. Comput. Biol.
Michael A. Charleston, Michael D. Hendy, David Penny