Max W. Shen

15 papers A* 1B 1Journal 13
YearRankTypeTitle / Venue / Authors
2025 J jnl
Training Dynamics of Learning 3D-Rotational Equivariance.
CoRR
Max W. Shen, Ewa M. Nowara, Michael Maser, Kyunghyun Cho
2025 J jnl
Training Dynamics of Learning 3D-Rotational Equivariance.
Trans. Mach. Learn. Res.
Max W. Shen, Ewa M. Nowara, Michael Maser, Kyunghyun Cho
2024 J jnl
Hierarchically branched diffusion models leverage dataset structure for class-conditional generation.
Trans. Mach. Learn. Res.
Alex M. Tseng, Max W. Shen, Tommaso Biancalani, Gabriele Scalia
2024 J jnl
Score-based Explainability for Graph Representations.
Trans. Mach. Learn. Res.
Ehsan Hajiramezanali, Sepideh Maleki, Max W. Shen, Kangway V. Chuang, Tommaso Biancalani, Gabriele Scalia
2023 A* conf
Towards Understanding and Improving GFlowNet Training.
ICML
Max W. Shen, Emmanuel Bengio, Ehsan Hajiramezanali, Andreas Loukas, Kyunghyun Cho, Tommaso Biancalani
2023 J jnl
Towards Understanding and Improving GFlowNet Training.
CoRR
Max W. Shen, Emmanuel Bengio, Ehsan Hajiramezanali, Andreas Loukas, Kyunghyun Cho, Tommaso Biancalani
2022 J jnl
Conditional Diffusion with Less Explicit Guidance via Model Predictive Control.
CoRR
Max W. Shen, Ehsan Hajiramezanali, Gabriele Scalia, Alex M. Tseng, Nathaniel Diamant, Tommaso Biancalani, Andreas Loukas
2022 J jnl
Hierarchically branched diffusion models for efficient and interpretable multi-class conditional generation.
CoRR
Alex M. Tseng, Tommaso Biancalani, Max W. Shen, Gabriele Scalia
2022 J jnl
Trust in AI: Interpretability is not necessary or sufficient, while black-box interaction is necessary and sufficient.
CoRR
Max W. Shen
2021 J jnl
Detection of gene cis-regulatory element perturbations in single-cell transcriptomes.
PLoS Comput. Biol.
Grace Hui Ting Yeo, Oscar Juez, Qing Chen, Budhaditya Banerjee, Lendy Chu, Max W. Shen, May Sabry, Ive Logister, Richard I. Sherwood, David K. Gifford
2021 J jnl
Machine learning based CRISPR gRNA design for therapeutic exon skipping.
PLoS Comput. Biol.
Wilson Louie, Max W. Shen, Zakir Tahiry, Sophia Zhang, Daniel Worstell, Christopher A. Cassa, Richard I. Sherwood, David K. Gifford
2018 J jnl
Predictable and precise template-free CRISPR editing of pathogenic variants.
Nat.
Max W. Shen, Mandana Arbab, Jonathan Y. Hsu, Daniel Worstell, Sannie J. Culbertson, Olga Krabbe, Christopher A. Cassa, David R. Liu, David K. Gifford, Richard I. Sherwood
2016 B conf
Assembly of Long Error-Prone Reads Using de Bruijn Graphs.
RECOMB
Yu Lin, Max W. Shen, Jeffrey Yuan, Mark Chaisson, Pavel A. Pevzner
2016 J jnl
Assembly of long error-prone reads using de Bruijn graphs.
Proc. Natl. Acad. Sci. USA
Yu Lin, Jeffrey Yuan, Mikhail Kolmogorov, Max W. Shen, Mark Chaisson, Pavel A. Pevzner
2016 J jnl
plasmidSPAdes: assembling plasmids from whole genome sequencing data.
Bioinform.
Dmitry Antipov, Nolan Hartwick, Max W. Shen, Mikhail Raiko, Alla L. Lapidus, Pavel A. Pevzner