Maureen A. Sartor

21 papers Journal 21
YearRankTypeTitle / Venue / Authors
2024 J jnl
piOxi database: a web resource of germline and somatic tissue piRNAs identified by chemical oxidation.
Database J. Biol. Databases Curation
Kai Wang, Bambarendage P. U. Perera, Rachel K. Morgan, Kimberley Sala-Hamrick, Viviana Geron, Laurie K. Svoboda, Christopher Faulk, Dana C. Dolinoy, Maureen A. Sartor
2023 J jnl
IndepthPathway: an integrated tool for in-depth pathway enrichment analysis based on single-cell sequencing data.
Bioinform.
Sanghoon Lee, Letian Deng, Yue Wang, Kai Wang, Maureen A. Sartor, Xiao-Song Wang
2021 J jnl
Coupled matrix-matrix and coupled tensor-matrix completion methods for predicting drug-target interactions.
Briefings Bioinform.
Maryam Bagherian, Renaid B. Kim, Cheng Jiang, Maureen A. Sartor, Harm Derksen, Kayvan Najarian
2021 J jnl
Erratum to: Machine learning approaches and databases for prediction of drug-target interaction: a survey paper.
Briefings Bioinform.
Maryam Bagherian, Elyas Sabeti, Kai Wang, Maureen A. Sartor, Zaneta Nikolovska-Coleska, Kayvan Najarian
2021 J jnl
Machine learning approaches and databases for prediction of drug-target interaction: a survey paper.
Briefings Bioinform.
Maryam Bagherian, Elyas Sabeti, Kai Wang, Maureen A. Sartor, Zaneta Nikolovska-Coleska, Kayvan Najarian
2020 J jnl
Universal concept signature analysis: genome-wide quantification of new biological and pathological functions of genes and pathways.
Briefings Bioinform.
Xu Chi, Maureen A. Sartor, Sanghoon Lee, Meenakshi Anurag, Snehal Patil, Pelle Hall, Matthew Wexler, Xiao-Song Wang
2017 J jnl
annotatr: genomic regions in context.
Bioinform.
Raymond G. Cavalcante, Maureen A. Sartor
2016 J jnl
ConceptMetab: exploring relationships among metabolite sets to identify links among biomedical concepts.
Bioinform.
Raymond G. Cavalcante, Snehal Patil, Terry E. Weymouth, Kestutis G. Bendinskas, Alla Karnovsky, Maureen A. Sartor
2016 J jnl
RNA-Enrich: a cut-off free functional enrichment testing method for RNA-seq with improved detection power.
Bioinform.
Chee Lee, Snehal Patil, Maureen A. Sartor
2014 J jnl
Broad-Enrich: functional interpretation of large sets of broad genomic regions.
Bioinform.
Raymond G. Cavalcante, Chee Lee, Ryan P. Welch, Snehal Patil, Terry E. Weymouth, Laura J. Scott, Maureen A. Sartor
2014 J jnl
MethylSig: a whole genome DNA methylation analysis pipeline.
Bioinform.
Yongseok Park, Maria E. Figueroa, Laura S. Rozek, Maureen A. Sartor
2014 J jnl
PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data.
Bioinform.
Yan-Xiao Zhang, Yu-Hsuan Lin, Timothy D. Johnson, Laura S. Rozek, Maureen A. Sartor
2012 J jnl
Convergence of genetic influences in comorbidity.
BMC Bioinform.
Richard C. McEachin, Keerthi S. Sannareddy, James D. Cavalcoli, Alla Karnovsky, Jacqueline M. Vink, Maureen A. Sartor
2012 J jnl
Metab2MeSH: annotating compounds with medical subject headings.
Bioinform.
Maureen A. Sartor, Alexander S. Ade, Zach Wright, David J. States, Gilbert S. Omenn, Brian D. Athey, Alla Karnovsky
2012 J jnl
Metscape 2 bioinformatics tool for the analysis and visualization of metabolomics and gene expression data.
Bioinform.
Alla Karnovsky, Terry E. Weymouth, Tim Hull, V. Glenn Tarcea, Giovanni Scardoni, Carlo Laudanna, Maureen A. Sartor, Kathleen A. Stringer, H. V. Jagadish, Charles F. Burant, Brian D. Athey, Gilbert S. Omenn
2012 J jnl
THINK Back: KNowledge-based Interpretation of High Throughput data.
BMC Bioinform.
Fernando Farfán, Jun Ma, Maureen A. Sartor, George Michailidis, H. V. Jagadish
2011 J jnl
Appearance frequency modulated gene set enrichment testing.
BMC Bioinform.
Jun Ma, Maureen A. Sartor, H. V. Jagadish
2010 J jnl
A genetic network model of cellular responses to lithium treatment and cocaine abuse in bipolar disorder.
BMC Syst. Biol.
Richard C. McEachin, Haiming Chen, Maureen A. Sartor, Scott F. Saccone, Benjamin J. Keller, Alan R. Prossin, James D. Cavalcoli, Melvin G. McInnis
2010 J jnl
ConceptGen: a gene set enrichment and gene set relation mapping tool.
Bioinform.
Maureen A. Sartor, Vasudeva Mahavisno, Venkateshwar G. Keshamouni, James D. Cavalcoli, Zach Wright, Alla Karnovsky, Rork Kuick, H. V. Jagadish, Barbara Mirel, Terry E. Weymouth, Brian D. Athey, Gilbert S. Omenn
2009 J jnl
LRpath: a logistic regression approach for identifying enriched biological groups in gene expression data.
Bioinform.
Maureen A. Sartor, George D. Leikauf, Mario Medvedovic
2006 J jnl
Intensity-based hierarchical Bayes method improves testing for differentially expressed genes in microarray experiments.
BMC Bioinform.
Maureen A. Sartor, Craig R. Tomlinson, Scott C. Wesselkamper, Siva Sivaganesan, George D. Leikauf, Mario Medvedovic