Maude Pupin

14 papers Journal 13
YearRankTypeTitle / Venue / Authors
2022 J jnl
Turbo prediction: a new approach for bioactivity prediction.
J. Comput. Aided Mol. Des.
Ammar Abdo, Maude Pupin
2021 J jnl
LINGO-DL: a text-based approach for molecular similarity searching.
J. Comput. Aided Mol. Des.
Ammar Abdo, Maude Pupin
2020 J jnl
Monomer structure fingerprints: an extension of the monomer composition version for peptide databases.
J. Comput. Aided Mol. Des.
Ammar Abdo, Eissa Ghaleb, Naser K. A. Alajmi, Maude Pupin
2020 J jnl
Norine: update of the nonribosomal peptide resource.
Nucleic Acids Res.
Areski Flissi, Emma Ricart, Clémentine Campart, Mickael Chevalier, Yoann Dufresne, Juraj Michalik, Philippe Jacques, Christophe Flahaut, Frédérique Lisacek, Valérie Leclère, Maude Pupin
2020 J jnl
Palantir: a springboard for the analysis of secondary metabolite gene clusters in large-scale genome mining projects.
Bioinform.
Loïc Meunier, Pierre Tocquin, Luc Cornet, Damien Sirjacobs, Valérie Leclère, Maude Pupin, Philippe Jacques, Denis Baurain
2019 J jnl
rBAN: retro-biosynthetic analysis of nonribosomal peptides.
J. Cheminformatics
Emma Ricart, Valérie Leclère, Areski Flissi, Markus Müller, Maude Pupin, Frédérique Lisacek
2016 J jnl
Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing.
Nucleic Acids Res.
Areski Flissi, Yoann Dufresne, Juraj Michalik, Laurie Tonon, Stéphane Janot, Laurent Noé, Philippe Jacques, Valérie Leclère, Maude Pupin
2015 J jnl
Smiles2Monomers: a link between chemical and biological structures for polymers.
J. Cheminformatics
Yoann Dufresne, Laurent Noé, Valérie Leclère, Maude Pupin
2014 J jnl
Prediction of New Bioactive Molecules using a Bayesian Belief Network.
J. Chem. Inf. Model.
Ammar Abdo, Valérie Leclère, Philippe Jacques, Naomie Salim, Maude Pupin
2013 — book
Modèles bio-informatiques pour les peptides non-ribosomiques et leurs synthétases. (Computational biology for nonribosomal peptides and their synthetases).
Maude Pupin
2012 J jnl
A new fingerprint to predict nonribosomal peptides activity.
J. Comput. Aided Mol. Des.
Ammar Abdo, Ségolène Caboche, Valérie Leclère, Philippe Jacques, Maude Pupin
2008 J jnl
NORINE: a database of nonribosomal peptides.
Nucleic Acids Res.
Ségolène Caboche, Maude Pupin, Valérie Leclère, Arnaud Fontaine, Philippe Jacques, Gregory Kucherov
2007 J jnl
Comparing sequences without using alignments: application to HIV/SIV subtyping.
BMC Bioinform.
Gilles Didier, Laurent Debomy, Maude Pupin, Ming Zhang, Alexander Grossmann, Claudine Devauchelle, Ivan Laprevotte
2006 J jnl
Local Decoding of Sequences and Alignment-Free Comparison.
J. Comput. Biol.
Gilles Didier, Ivan Laprevotte, Maude Pupin, Alain Hénaut