Matthias Zytnicki

18 papers A* 2A 1Misc 1Journal 12
YearRankTypeTitle / Venue / Authors
2025 J jnl
A comprehensive review and benchmark of differential analysis tools for Hi-C data.
Briefings Bioinform.
Elise Jorge, Sylvain Foissac, Pierre Neuvial, Matthias Zytnicki, Nathalie Vialaneix
2025 J jnl
Pairwise graph edit distance characterizes the impact of the construction method on pangenome graphs.
Bioinform.
Siegfried Dubois, Matthias Zytnicki, Claire Lemaitre, Thomas Faraut
2022 — book
Méthodes informatiques pour l'analyse de données de séquençage de petits ARN.
Matthias Zytnicki
2022 J jnl
srnaMapper: an optimal mapping tool for sRNA-Seq reads.
BMC Bioinform.
Matthias Zytnicki, Christine Gaspin
2017 J jnl
mmquant: how to count multi-mapping reads?
BMC Bioinform.
Matthias Zytnicki
2016 J jnl
Multi-language evaluation of exact solvers in graphical model discrete optimization.
Constraints An Int. J.
Barry Hurley, Barry O'Sullivan, David Allouche, George Katsirelos, Thomas Schiex, Matthias Zytnicki, Simon de Givry
2015 A conf
Anytime Hybrid Best-First Search with Tree Decomposition for Weighted CSP.
CP
David Allouche, Simon de Givry, George Katsirelos, Thomas Schiex, Matthias Zytnicki
2014 J jnl
Bounds Arc Consistency for Weighted CSPs.
CoRR
Matthias Zytnicki, Christine Gaspin, Simon de Givry, Thomas Schiex
2014 J jnl
Tedna: a transposable element
Bioinform.
Matthias Zytnicki, Eduard Akhunov, Hadi Quesneville
2013 J jnl
Efficient comparison of sets of intervals with NC-lists.
Bioinform.
Matthias Zytnicki, Yufei Luo, Hadi Quesneville
2012 J jnl
Mapping Reads on a Genomic Sequence: An Algorithmic Overview and a Practical Comparative Analysis.
J. Comput. Biol.
Sophie Schbath, Véronique Martin, Matthias Zytnicki, Julien Fayolle, Valentin Loux, Jean-François Gibrat
2010 J jnl
Soft arc consistency revisited.
Artif. Intell.
Martin C. Cooper, Simon de Givry, Martí Sánchez-Fibla, Thomas Schiex, Matthias Zytnicki, Tomás Werner
2009 J jnl
Bounds Arc Consistency for Weighted CSPs.
J. Artif. Intell. Res.
Matthias Zytnicki, Christine Gaspin, Simon de Givry, Thomas Schiex
2008 J jnl
DARN! A Weighted Constraint Solver for RNA Motif Localization.
Constraints An Int. J.
Matthias Zytnicki, Christine Gaspin, Thomas Schiex
2008 A* conf
Virtual Arc Consistency for Weighted CSP.
AAAI
Martin C. Cooper, Simon de Givry, Martí Sánchez-Fibla, Thomas Schiex, Matthias Zytnicki
2007 — —
Recherche d'ARN non-codants par réseaux de contraintes pondérées. (Non-coding RNA localization using weighted constraint network).
Matthias Zytnicki
2006 Misc conf
A new local consistency for weighted CSP dedicated to long domains.
SAC
Matthias Zytnicki, Christine Gaspin, Thomas Schiex
2005 A* conf
Existential arc consistency: Getting closer to full arc consistency in weighted CSPs.
IJCAI
Simon de Givry, Federico Heras, Matthias Zytnicki, Javier Larrosa