Matthias Becker

18 papers C 1Journal 11Unranked 4

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	DrugDiff: small molecule diffusion model with flexible guidance towards molecular properties. J. Cheminformatics Marie Oestreich, Erinc Merdivan, Michael Lee, Joachim L. Schultze, Marie Piraud, Matthias Becker
2024	J	`jnl`	LLM4GRN: Discovering Causal Gene Regulatory Networks with LLMs - Evaluation through Synthetic Data Generation. CoRR Tejumade Afonja, Ivaxi Sheth, Ruta Binkyte, Waqar Hanif, Thomas Ulas, Matthias Becker, Mario Fritz
2024	J	`jnl`	Small molecule autoencoders: architecture engineering to optimize latent space utility and sustainability. J. Cheminformatics Marie Oestreich, Iva Ewert, Matthias Becker
2024	J	`jnl`	Towards Biologically Plausible and Private Gene Expression Data Generation. CoRR Dingfan Chen, Marie Oestreich, Tejumade Afonja, Raouf Kerkouche, Matthias Becker, Mario Fritz
2024	J	`jnl`	Towards Biologically Plausible and Private Gene Expression Data Generation. Proc. Priv. Enhancing Technol. Dingfan Chen, Marie Oestreich, Tejumade Afonja, Raouf Kerkouche, Matthias Becker, Mario Fritz
2022	J	`jnl`	hCoCena: horizontal integration and analysis of transcriptomics datasets. Bioinform. Marie Oestreich, Lisa Holsten, Shobhit Agrawal, Kilian Dahm, Philipp Koch, Han Jin, Matthias Becker, Thomas Ulas
2020	C	`conf`	Scaling Genomics Data Processing with Memory-Driven Computing to Accelerate Computational Biology. ISC Matthias Becker, Umesh Worlikar, Shobhit Agrawal, Hartmut Schultze, Thomas Ulas, Sharad Singhal, Joachim L. Schultze
2019	—	`conf`	Accelerated Genomics Data Processing using Memory-Driven Computing. BIBM Matthias Becker, Hartmut Schultze, Thomas Ulas, Sharad Singhal, Joachim L. Schultze, Milind Chabbi, Stefanie Warnat-Herresthal, Umesh Worlikar, Shobhit Agrawal, Jaydeep Bhat, Jonas Schulte-Schrepping, Kevin E. Bassler, Patrick Guenther
2017	J	`jnl`	Muscle Tissue Labeling of Human Lower Limb in Multi-Channel mDixon MR Imaging: Concepts and Applications. IEEE ACM Trans. Comput. Biol. Bioinform. Matthias Becker, Nadia Magnenat-Thalmann
2016	J	`jnl`	A computational approach to calculate personalized pennation angle based on MRI: effect on motion analysis. Int. J. Comput. Assist. Radiol. Surg. Andra Chincisan, Karelia Tecante, Matthias Becker, Nadia Magnenat-Thalmann, Christof Hurschler, Hon Fai Choi
2016	J	`jnl`	Coupling strategies for multi-resolution deformable meshes: expanding the pyramid approach beyond its one-way nature. Int. J. Comput. Assist. Radiol. Surg. Matthias Becker, Niels A. Nijdam, Nadia Magnenat-Thalmann
2016	—	`—`	Efficient extraction of musculoskeletal structures from multi-channel MR images. Matthias Becker
2016	J	`jnl`	Model-based segmentation in orbital volume measurement with cone beam computed tomography and evaluation against current concepts. Int. J. Comput. Assist. Radiol. Surg. Maximilian E. H. Wagner, Nils-Claudius Gellrich, Karl-Ingo Friese, Matthias Becker, Franz-Erich Wolter, Juergen T. Lichtenstein, Marcus Stoetzer, Majeed Rana, Harald Essig
2015	—	`conf`	Development of a reliable method for orbit segmentation & measuring. MeMeA Matthias Becker, Karl-Ingo Friese, Franz-Erich Wolter, Nils-Claudius Gellrich, Harald Essig
2014	—	`ch.`	Deformable Models in Medical Image Segmentation. 3D Multiscale Physiological Human Matthias Becker, Nadia Magnenat-Thalmann
2014	J	`jnl`	Multimodal composition of the digital patient: a strategy for the knee articulation. Vis. Comput. Hon Fai Choi, Andra Chincisan, Matthias Becker, Nadia Magnenat-Thalmann
2014	—	`conf`	Muscle tissue labeling of human lower extremities in multi-channel mDixon MR imaging: Concepts and applications. BIBM Matthias Becker, Nadia Magnenat-Thalmann
2014	—	`conf`	Open framework for management and processing of multi-modality and multidimensional imaging data for analysis and modelling muscular function. Image-Guided Procedures David García Juan, Bénédicte M. A. Delattre, Sara Trombella, Sean Dean Lynch, Matthias Becker, Hon Fai Choi, Osman Ratib