Matthew W. Hahn

17 papers C 1Misc 3Journal 11Unranked 1
YearRankTypeTitle / Venue / Authors
2025 J jnl
On the Approximation of Phylogenetic Distance Functions by Artificial Neural Networks.
CoRR
Benjamin K. Rosenzweig, Matthew W. Hahn
2023 J jnl
Phylogenetic inference using generative adversarial networks.
Bioinform.
Megan L. Smith, Matthew W. Hahn
2023 J jnl
Updated site concordance factors minimize effects of homoplasy and taxon sampling.
Bioinform.
Yu K. Mo, Robert Lanfear, Matthew W. Hahn, Bui Quang Minh
2021 J jnl
CAFE 5 models variation in evolutionary rates among gene families.
Bioinform.
Fábio K. Mendes, Dan Vanderpool, Ben Fulton, Matthew W. Hahn
2020 J jnl
The ortholog conjecture revisited: the value of orthologs and paralogs in function prediction.
Bioinform.
Moses Stamboulian, Rafael F. Guerrero, Matthew W. Hahn, Predrag Radivojac
2019 J jnl
A new class of metrics for learning on real-valued and structured data.
Data Min. Knowl. Discov.
Ruiyu Yang, Yuxiang Jiang, Scott Mathews, Elizabeth A. Housworth, Matthew W. Hahn, Predrag Radivojac
2018 J jnl
Proteomic Evidence for In-Frame and Out-of-Frame Alternatively Spliced Isoforms in Human and Mouse.
IEEE ACM Trans. Comput. Biol. Bioinform.
Rodrigo F. Ramalho, Sujun Li, Predrag Radivojac, Matthew W. Hahn
2017 Misc conf
Session Introduction.
PSB
Yana Bromberg, Matthew W. Hahn, Predrag Radivojac
2014 J jnl
Extensive Error in the Number of Genes Inferred from Draft Genome Assemblies.
PLoS Comput. Biol.
James F. Denton, Jose Lugo-Martinez, Abraham E. Tucker, Daniel R. Schrider, Wesley C. Warren, Matthew W. Hahn
2013 Misc conf
Detecting Highly Differentiated Copy-Number Variants from Pooled Population Sequencing.
Pacific Symposium on Biocomputing
Daniel R. Schrider, David J. Begun, Matthew W. Hahn
2011 J jnl
Testing the Ortholog Conjecture with Comparative Functional Genomic Data from Mammals.
PLoS Comput. Biol.
Nathan L. Nehrt, Wyatt T. Clark, Predrag Radivojac, Matthew W. Hahn
2009 J jnl
All Human-Specific Gene Losses Are Present in the Genome as Pseudogenes.
J. Comput. Biol.
Daniel R. Schrider, James C. Costello, Matthew W. Hahn
2009 Misc conf
Identifying Parent-Daughter Relationships Among Duplicated Genes.
Pacific Symposium on Biocomputing
Mira V. Han, Matthew W. Hahn
2008 C conf
Gain and loss of phosphorylation sites in human cancer.
ECCB
Predrag Radivojac, Peter H. Baenziger, Maricel G. Kann, Matthew E. Mort, Matthew W. Hahn, Sean D. Mooney
2008 — conf
Limitations of Pseudogenes in Identifying Gene Losses.
RECOMB-CG
James C. Costello, Mira V. Han, Matthew W. Hahn
2007 — book
Introduction to computational genomics - a case studies approach.
Nello Cristianini, Matthew W. Hahn
2006 J jnl
CAFE: a computational tool for the study of gene family evolution.
Bioinform.
Tijl De Bie, Nello Cristianini, Jeffery P. Demuth, Matthew W. Hahn