Matthew N. McCall

16 papers Journal 16
YearRankTypeTitle / Venue / Authors
2024 J jnl
A model-based hierarchical Bayesian approach to Sholl analysis.
Bioinform.
Erik Vonkaenel, Alexis Feidler, Rebecca Lowery, Katherine Andersh, Tanzy Love, Ania Majewska, Matthew N. McCall
2024 J jnl
Correction: Multiple imputation and direct estimation for qPCR data with non-detects.
BMC Bioinform.
Valeriia Sherina, Helene R. McMurray, Winslow Powers, Hartmut Land, Tanzy M. T. Love, Matthew N. McCall
2021 J jnl
A systems genomics approach uncovers molecular associates of RSV severity.
PLoS Comput. Biol.
Matthew N. McCall, Chin-Yi Chu, Lu Wang, Lauren Benoodt, Juilee Thakar, Anthony Corbett, Jeanne Holden-Wiltse, Christopher Slaunwhite, Alex Grier, Steven R. Gill, Ann R. Falsey, David J. Topham, Mary T. Caserta, Edward E. Walsh, Xing Qiu, Thomas J. Mariani
2021 J jnl
Autoregressive modeling and diagnostics for qPCR amplification.
Bioinform.
Benjamin Hsu, Valeriia Sherina, Matthew N. McCall
2021 J jnl
The effect of tissue composition on gene co-expression.
Briefings Bioinform.
Yun Zhang, Jonavelle Cuerdo, Marc K. Halushka, Matthew N. McCall
2020 J jnl
Multiple imputation and direct estimation for qPCR data with non-detects.
BMC Bioinform.
Valeriia Sherina, Helene R. McMurray, Winslow Powers, Hartmut Land, Tanzy M. T. Love, Matthew N. McCall
2016 J jnl
A benchmark for microRNA quantification algorithms using the OpenArray platform.
BMC Bioinform.
Matthew N. McCall, Alexander S. Baras, Alexander Crits-Christoph, Roxann Ingersoll, Melissa A. McAlexander, Kenneth W. Witwer, Marc K. Halushka
2014 J jnl
On non-detects in qPCR data.
Bioinform.
Matthew N. McCall, Helene R. McMurray, Hartmut Land, Anthony Almudevar
2014 J jnl
The Gene Expression Barcode 3.0: improved data processing and mining tools.
Nucleic Acids Res.
Matthew N. McCall, Harris A. Jaffee, Susan J. Zelisko, Neeraj Sinha, Guido J. E. K. Hooiveld, Rafael A. Irizarry, Michael J. Zilliox
2013 J jnl
ChIP-PED enhances the analysis of ChIP-seq and ChIP-chip data.
Bioinform.
George Wu, Jason T. Yustein, Matthew N. McCall, Michael J. Zilliox, Rafael A. Irizarry, Karen Zeller, Chi V. Dang, Hongkai Ji
2012 J jnl
Affymetrix GeneChip microarray preprocessing for multivariate analyses.
Briefings Bioinform.
Matthew N. McCall, Anthony Almudevar
2012 J jnl
Gene expression anti-profiles as a basis for accurate universal cancer signatures.
BMC Bioinform.
Héctor Corrada Bravo, Vasyl Pihur, Matthew N. McCall, Rafael A. Irizarry, Jeffrey T. Leek
2012 J jnl
fRMA ST: frozen robust multiarray analysis for Affymetrix Exon and Gene ST arrays.
Bioinform.
Matthew N. McCall, Harris A. Jaffee, Rafael A. Irizarry
2011 J jnl
Assessments of Affymetrix GeneChip Microarray Quality for Laboratories and Single Samples.
BMC Bioinform.
Matthew N. McCall, Peter N. Murakami, Margus Lukk, Wolfgang Huber, Rafael A. Irizarry
2011 J jnl
Thawing Frozen Robust Multi-array Analysis (fRMA).
BMC Bioinform.
Matthew N. McCall, Rafael A. Irizarry
2011 J jnl
The Gene Expression Barcode: leveraging public data repositories to begin cataloging the human and murine transcriptomes.
Nucleic Acids Res.
Matthew N. McCall, Karan Uppal, Harris A. Jaffee, Michael J. Zilliox, Rafael A. Irizarry