Matthew J. McAuliffe

33 papers B 13Journal 9Unranked 11
YearRankTypeTitle / Venue / Authors
2025 J jnl
Text Embedded Swin-UMamba for DeepLesion Segmentation.
CoRR
Ruida Cheng, Tejas Sudharshan Mathai, Pritam Mukherjee, Benjamin Hou, Qingqing Zhu, Zhiyong Lu, Matthew J. McAuliffe, Ronald M. Summers
2023 J jnl
Implementing Informatics Tools with Data Management Plans for Disease Area Research.
Data Sci. J.
Vivek Navale, Matthew J. McAuliffe
2022 J jnl
The Integration of a Canonical Workflow Framework with an Informatics System for Disease Area Research.
Data Intell.
Vivek Navale, Matthew J. McAuliffe
2019 J jnl
Development of an informatics system for accelerating biomedical research.
F1000Research
Vivek Navale, Michele Ji, Olga Vovk, Leonie Misquitta, Tsega Gebremichael, Alison Garcia, Yang Fann, Matthew J. McAuliffe
2018 J jnl
Long-term preservation of biomedical research data.
F1000Research
Vivek Navale, Matthew J. McAuliffe
2017 B conf
Automatic MR prostate segmentation by deep learning with holistically-nested networks.
Image Processing
Ruida Cheng, Holger R. Roth, Nathan Lay, Le Lu, Baris Turkbey, William Gandler, Evan S. McCreedy, Peter L. Choyke, Ronald M. Summers, Matthew J. McAuliffe
2017 — conf
Deep learning with orthogonal volumetric HED segmentation and 3D surface reconstruction model of prostate MRI.
ISBI
Ruida Cheng, Nathan Lay, Francesca Mertan, Baris Turkbey, Holger R. Roth, Le Lu, William Gandler, Evan S. McCreedy, Thomas Pohida, Peter L. Choyke, Matthew J. McAuliffe, Ronald M. Summers
2016 B conf
Active appearance model and deep learning for more accurate prostate segmentation on MRI.
Image Processing
Ruida Cheng, Holger R. Roth, Le Lu, Shijun Wang, Baris Turkbey, William Gandler, Evan S. McCreedy, Harsh K. Agarwal, Peter L. Choyke, Ronald M. Summers, Matthew J. McAuliffe
2016 — conf
Gaze2Segment: A Pilot Study for Integrating Eye-Tracking Technology into Medical Image Segmentation.
MCV/BAMBI@MICCAI
Naji Khosravan, Haydar Celik, Baris Turkbey, Ruida Cheng, Evan S. McCreedy, Matthew J. McAuliffe, Sandra Bednarova, Elizabeth C. Jones, Xinjian Chen, Peter L. Choyke, Bradford J. Wood, Ulas Bagci
2016 J jnl
Gaze2Segment: A Pilot Study for Integrating Eye-Tracking Technology into Medical Image Segmentation.
CoRR
Naji Khosravan, Haydar Celik, Baris Turkbey, Ruida Cheng, Evan S. McCreedy, Matthew J. McAuliffe, Sandra Bednarova, Elizabeth C. Jones, Xinjian Chen, Peter L. Choyke, Bradford J. Wood, Ulas Bagci
2016 — conf
Patellar segmentation from 3D magnetic resonance images using guided recursive ray-tracing for edge pattern detection.
Biomedical Applications in Molecular, Structural, and Functional Imaging
Ruida Cheng, Jennifer N. Jackson, Evan S. McCreedy, William Gandler, J. J. F. A. Eijkenboom, M. van Middelkoop, Matthew J. McAuliffe, Frances T. Sheehan
2014 — conf
Atlas based AAM and SVM model for fully automatic MRI prostate segmentation.
EMBC
Ruida Cheng, Baris Turkbey, William Gandler, Harsh K. Agarwal, Vijay P. Shah, Alexandra Bokinsky, Evan S. McCreedy, Shijun Wang, Sandeep Sankineni, Marcelino Bernardo, Thomas Pohida, Peter L. Choyke, Matthew J. McAuliffe
2014 — conf
GPU based multi-histogram volume navigation for virtual bronchoscopy.
EMBC
Ruida Cheng, Sheng Xu, Alexandra Bokinsky, Evan S. McCreedy, William Gandler, Bradford J. Wood, Matthew J. McAuliffe
2013 B conf
2D registration guided models for semi-automatic MRI prostate segmentation.
Image Processing
Ruida Cheng, Baris Turkbey, Justin Senseney, Marcelino Bernardo, Alexandra Bokinsky, William Gandler, Evan S. McCreedy, Thomas Pohida, Peter L. Choyke, Matthew J. McAuliffe
2013 — conf
Java multi-histogram volume rendering framework for medical images.
Image-Guided Procedures
Justin Senseney, Alexandra Bokinsky, Ruida Cheng, Evan S. McCreedy, Matthew J. McAuliffe
2013 — conf
Segmentation and surface reconstruction model of prostate MRI to improve prostate cancer diagnosis.
ISBI
Ruida Cheng, Marcelino Bernardo, Justin Senseney, Alexandra Bokinsky, William Gandler, Baris Turkbey, Thomas Pohida, Peter L. Choyke, Matthew J. McAuliffe
2012 B conf
A flexible Java GPU-enhanced visualization framework and its applications.
CBMS
Ruida Cheng, Justin Senseney, Nish Pandya, Evan S. McCreedy, Matthew J. McAuliffe, Alexandra Bokinsky
2012 J jnl
Sharing Heterogeneous Data: The National Database for Autism Research.
Neuroinformatics
Dan Hall, Michael F. Huerta, Matthew J. McAuliffe, Gregory K. Farber
2010 J jnl
Using global unique identifiers to link autism collections.
J. Am. Medical Informatics Assoc.
Stephen B. Johnson, Glen Whitney, Matthew J. McAuliffe, Hailong Wang, Evan S. McCreedy, Leon Rozenblit, Clark C. Evans
2009 B conf
Automated segmentation of computed tomography images.
CBMS
Justin Senseney, Paul F. Hemler, Matthew J. McAuliffe
2009 B conf
Ontology driven data integration for autism research.
CBMS
Lynn Young, Samson W. Tu, Lakshika Tennakoon, David Vismer, Vadim Astakhov, Amarnath Gupta, Jeffrey S. Grethe, Maryann E. Martone, Amar K. Das, Matthew J. McAuliffe
2008 — conf
Java based volume rendering frameworks.
Image-Guided Procedures
Ruida Cheng, Alexandra Bokinsky, Paul F. Hemler, Evan S. McCreedy, Matthew J. McAuliffe
2007 B conf
Segmentation of magnetic resonance images of the thighs for a new National Institutes of Health initiative.
Image Processing
A. Monzon, Paul F. Hemler, Mike A. Nalls, Todd M. Manini, Brian C. Clark, T. B. Harris, Matthew J. McAuliffe
2006 — conf
Assessment of radio frequency of hepatic tumors.
Image-Guided Procedures
Paul F. Hemler, Evan S. McCreedy, Ruida Cheng, Bradford J. Wood, Matthew J. McAuliffe
2006 J jnl
Radio Frequency Ablation Registration, Segmentation, and Fusion Tool.
IEEE Trans. Inf. Technol. Biomed.
Evan S. McCreedy, Ruida Cheng, Paul F. Hemler, Anand Viswanathan, Bradford J. Wood, Matthew J. McAuliffe
2006 B conf
Vasculature segmentation for radio frequency ablation of non-resectable hepatic tumors.
Image Processing
Paul F. Hemler, Evan S. McCreedy, Ruida Cheng, Bradford J. Wood, Matthew J. McAuliffe
2005 B conf
Free software tools for atlas-based volumetric neuroimage analysis.
Image Processing
Pierre-Louis Bazin, Dzung L. Pham, William Gandler, Matthew J. McAuliffe
2005 B conf
Radio Frequency Ablation Registration, Segmentation, and Fusion Tool.
CBMS
Evan S. McCreedy, Ruida Cheng, Paul F. Hemler, Anand Viswanathan, Bradford J. Wood, Matthew J. McAuliffe
2004 B conf
Performance evaluation of multiscale vessel enhancement filtering.
Image Processing
Paul F. Hemler, Evan S. McCreedy, Matthew J. McAuliffe
2001 — conf
Helical CT of von Hippel-Lindau: semi-automated segmentation of renal lesions.
ICIP (2)
Ronald M. Summers, Cecily M. L. Agcaoili, Matthew J. McAuliffe, Sarang S. Dalal, Peter J. Yim, Peter L. Choyke, McClellan M. Walther, W. Marston Linehan
2001 B conf
Medical Image Processing, Analysis & Visualization in Clinical Research.
CBMS
Matthew J. McAuliffe, Francois M. Lalonde, Delia McGarry, William Gandler, Karl Csaky, Benes L. Trus
2001 B conf
Registration of Time-Series Contrast Enhanced Magnetic Resonance Images for Renography.
CBMS
Peter J. Yim, Hani B. Marcos, Peter L. Choyke, Matthew J. McAuliffe, Delia McGarry, Ian Heaton
1996 — conf
Scale-Space Boundary Evolution Initialized by Cores.
VBC
Matthew J. McAuliffe, David H. Eberly, Daniel S. Fritsch, Edward L. Chaney, Stephen M. Pizer