Matteo Masetti

14 papers Journal 14
YearRankTypeTitle / Venue / Authors
2025 J jnl
Dissecting the RAD51-BRC4 Interaction Landscape through Integrative Molecular Simulations and Experimental Biophysics.
J. Chem. Inf. Model.
Veronica Bresciani, Francesco Rinaldi, Pedro Franco, Stefania Girotto, Andrea Cavalli, Julian D. Langer, Matteo Masetti, Mattia Bernetti
2024 J jnl
Similarities and Differences in Ligand Binding to Protein and RNA Targets: The Case of Riboflavin.
J. Chem. Inf. Model.
Stefano Bosio, Mattia Bernetti, Walter Rocchia, Matteo Masetti
2023 J jnl
Integrated Approach Including Docking, MD Simulations, and Network Analysis Highlights the Action Mechanism of the Cardiac hERG Activator RPR260243.
J. Chem. Inf. Model.
Flavio Costa, Riccardo Ocello, Carlo Guardiani, Alberto Giacomello, Matteo Masetti
2021 J jnl
Targeting the JAK/STAT Pathway: A Combined Ligand- and Target-Based Approach.
J. Chem. Inf. Model.
María Gálvez-Llompart, Riccardo Ocello, Laura Rullo, Serena Stamatakos, Irene Alessandrini, Riccardo Zanni, Iñaki Tuñón, Andrea Cavalli, Sanzio Candeletti, Matteo Masetti, Patrizia Romualdi, Maurizio Recanatini
2020 J jnl
Conduction and Gating Properties of the TRAAK Channel from Molecular Dynamics Simulations with Different Force Fields.
J. Chem. Inf. Model.
Riccardo Ocello, Simone Furini, Francesca Lugli, Maurizio Recanatini, Carmen Domene, Matteo Masetti
2020 J jnl
Exploring Conformational Dynamics of the Extracellular Venus flytrap Domain of the GABAB Receptor: A Path-Metadynamics Study.
J. Chem. Inf. Model.
Linn S. M. Evenseth, Riccardo Ocello, Mari Gabrielsen, Matteo Masetti, Maurizio Recanatini, Ingebrigt Sylte, Andrea Cavalli
2019 J jnl
Predicting Residence Time and Drug Unbinding Pathway through Scaled Molecular Dynamics.
J. Chem. Inf. Model.
Doris A. Schuetz, Mattia Bernetti, Martina Bertazzo, Djordje Musil, Hans-Michael Eggenweiler, Maurizio Recanatini, Matteo Masetti, Gerhard F. Ecker, Andrea Cavalli
2018 J jnl
Binding Residence Time through Scaled Molecular Dynamics: A Prospective Application to hDAAO Inhibitors.
J. Chem. Inf. Model.
Mattia Bernetti, Elena Rosini, Luca Mollica, Matteo Masetti, Loredano Pollegioni, Maurizio Recanatini, Andrea Cavalli
2018 J jnl
Fully Flexible Docking via Reaction-Coordinate-Independent Molecular Dynamics Simulations.
J. Chem. Inf. Model.
Martina Bertazzo, Mattia Bernetti, Maurizio Recanatini, Matteo Masetti, Andrea Cavalli
2017 J jnl
Development of a multisite model for Ni(II) ion in solution from thermodynamic and kinetic data.
J. Comput. Chem.
Matteo Masetti, Francesco Musiani, Mattia Bernetti, Federico Falchi, Andrea Cavalli, Stefano Ciurli, Maurizio Recanatini
2013 J jnl
An Automated Docking Protocol for hERG Channel Blockers.
J. Chem. Inf. Model.
Giovanni Paolo Di Martino, Matteo Masetti, Luisa Ceccarini, Andrea Cavalli, Maurizio Recanatini
2013 J jnl
Collecting and Assessing Human Lactate Dehydrogenase-A Conformations for Structure-Based Virtual Screening.
J. Chem. Inf. Model.
Rosa Buonfiglio, Mariarosaria Ferraro, Federico Falchi, Andrea Cavalli, Matteo Masetti, Maurizio Recanatini
2012 J jnl
Combining Dyad Protonation and Active Site Plasticity in BACE-1 Structure-Based Drug Design.
J. Chem. Inf. Model.
Puneet Kacker, Matteo Masetti, Martina Mangold, Giovanni Bottegoni, Andrea Cavalli
2008 J jnl
Modeling the hERG potassium channel in a phospholipid bilayer: Molecular dynamics and drug docking studies.
J. Comput. Chem.
Matteo Masetti, Andrea Cavalli, Maurizio Recanatini