Martin T. Swain

25 papers A 2B 1C 2Misc 1Journal 11Unranked 8
YearRankTypeTitle / Venue / Authors
2019 — conf
Generating Reliable Genome Assemblies of Intestinal Protozoans from Clinical Samples for the Purpose of Biomarker Discovery.
BIOSTEC (Selected Papers)
Arthur Morris, Justin Pachebat, Graeme Tyson, Guy Robinson, Rachel Chalmers, Martin T. Swain
2019 — conf
Identifying and Resolving Genome Misassembly Issues Important for Biomarker Discovery in the Protozoan Parasite, Cryptosporidium.
BIOINFORMATICS
Arthur Morris, Justin Pachebat, Guy Robinson, Rachel Chalmers, Martin T. Swain
2016 J jnl
DISMISS: detection of stranded methylation in MeDIP-Seq data.
BMC Bioinform.
Umar Khan Niazi, Kathrin K. Geyer, Martin J. Vickers, Karl F. Hoffmann, Martin T. Swain
2016 J jnl
MetaPred2CS: a sequence-based meta-predictor for protein-protein interactions of prokaryotic two-component system proteins.
Bioinform.
Altan Kara, Martin J. Vickers, Martin T. Swain, David E. Whitworth, Narcis Fernandez-Fuentes
2016 J jnl
MultiGrain/MAPPER: A distributed multiscale computing approach to modeling and simulating gene regulation networks.
Future Gener. Comput. Syst.
Alexandru E. Mizeranschi, Martin T. Swain, Raluca Scona, Quentin Fazilleau, Bartosz Bosak, Tomasz Piontek, Piotr Kopta, Paul Thompson, Werner Dubitzky
2015 J jnl
Genome-wide prediction of prokaryotic two-component system networks using a sequence-based meta-predictor.
BMC Bioinform.
Altan Kara, Martin J. Vickers, Martin T. Swain, David E. Whitworth, Narcis Fernandez-Fuentes
2013 Misc conf
Fast Comparison of Microbial Genomes Using the Chaos Games Representation for Metagenomic Applications.
ICCS
Martin T. Swain
2010 A conf
A scheduling framework for large-scale, parallel, and topology-aware applications.
IPDPS
Valentin Kravtsov, Pavel Bar, David Carmeli, Assaf Schuster, Martin T. Swain
2010 J jnl
A scheduling framework for large-scale, parallel, and topology-aware applications.
J. Parallel Distributed Comput.
Valentin Kravtsov, Pavel Bar, David Carmeli, Assaf Schuster, Martin T. Swain
2010 J jnl
Comparative study of three commonly used continuous deterministic methods for modeling gene regulation networks.
BMC Bioinform.
Martin T. Swain, Johannes J. Mandel, Werner Dubitzky
2010 J jnl
P-found: Grid-enabling distributed repositories of protein folding and unfolding simulations for data mining.
Future Gener. Comput. Syst.
Martin T. Swain, Cândida G. Silva, Nuno Loureiro-Ferreira, Vitaliy Ostropytskyy, João Brito, Olivier Riche, Frederic T. Stahl, Werner Dubitzky, Rui M. M. Brito
2009 — conf
A standard-compliant global map of the bile acid/xenobiotic signaling network: Construction and automated query processing.
BIOCOMP
Oliver Schmidt, José López, Francisco Azuaje, Paul Thompson, Martin T. Swain, Werner Dubitzky
2009 — conf
Complex System Simulations with QosCosGrid.
ICCS (1)
Krzysztof Kurowski, Walter de Back, Werner Dubitzky, László Gulyás, George Kampis, Mariusz Mamonski, Gabor Szemes, Martin T. Swain
2009 — conf
Running Parallel Applications with Topology-Aware Grid Middleware.
eScience
Pavel Bar, Camille Coti, Derek Groen, Thomas Hérault, Valentin Kravtsov, Assaf Schuster, Martin T. Swain
2008 — conf
A Fast and Efficient Algorithm for Topology-Aware Coallocation.
ICCS (1)
Valentin Kravtsov, Martin T. Swain, Uri Dubin, Werner Dubitzky, Assaf Schuster
2008 — conf
Comparing Grid Computing Solutions for Reverse-Engineering Gene Regulatory Networks.
ICCS (1)
Martin T. Swain, Johannes J. Mandel, Werner Dubitzky
2008 J jnl
Digging Deep into the Data Mine with DataMiningGrid.
IEEE Internet Comput.
Vlado Stankovski, Martin T. Swain, Valentin Kravtsov, Thomas Niessen, Dennis Wegener, M. Rohm, Jernej Trnkoczy, Michael May, Jürgen Franke, Assaf Schuster, Werner Dubitzky
2008 — conf
Grid Computing Solutions for Distributed Repositories of Protein Folding and Unfolding Simulations.
ICCS (3)
Martin T. Swain, Vitaliy Ostropytskyy, Cândida G. Silva, Frederic T. Stahl, Olivier Riche, Rui M. M. Brito, Werner Dubitzky
2008 J jnl
Grid-enabling data mining applications with DataMiningGrid: An architectural perspective.
Future Gener. Comput. Syst.
Vlado Stankovski, Martin T. Swain, Valentin Kravtsov, Thomas Niessen, Dennis Wegener, Jörg Kindermann, Werner Dubitzky
2006 C conf
P-found: The Protein Folding and Unfolding Simulation Repository.
CIBCB
Cândida G. Silva, Vitaliy Ostropytskyy, Nuno Loureiro-Ferreira, Daniel P. Berrar, Martin T. Swain, Werner Dubitzky, Rui M. M. Brito
2005 B conf
Modeling gene-regulatory networks using evolutionary algorithms and distributed computing.
CCGRID
Martin T. Swain, T. Hunniford, Johannes J. Mandel, Niall M. Palfreyman, Werner Dubitzky
2005 J jnl
Predicting Peptide Interactions With Model Class II Mhc Structures.
Int. J. Artif. Intell. Tools
Martin T. Swain, Anthony J. Brooks, Graham J. L. Kemp
2002 J jnl
Modelling Protein Side-chain Conformations using Constraint Logic Programming.
Comput. Chem.
Martin T. Swain, Graham J. L. Kemp
2001 A conf
A CLP Approach to the Protein Side-Chain Placement Problem.
CP
Martin T. Swain, Graham J. L. Kemp
2001 C conf
An Automated Approach to Modeling Class II MHC Alleles and Predicting Peptide Binding.
BIBE
Martin T. Swain, Anthony J. Brooks, Graham J. L. Kemp