Martin Romacker

50 papers A* 1B 3C 2Misc 11Journal 15Unranked 16

Year	Rank	Type	Title / Venue / Authors
2025	—	`conf`	The Pistoia Alliance Pharma General Ontology: Experience using LinkML in Pharma. SWAT4HCLS Joshua Daniel Valdez, Philippe Rocca-Serra, Markus Hartmann, Darko Hric, Asiyah Yu Lin, Birgit Meldal, Peter McQuilton, Riccardo Mariani, Martin Romacker, Giovanni Nisato, Ben Gardner
2024	J	`jnl`	A framework for developing a knowledge management platform. CoRR Marie Lisandra Zepeda Mendoza, Sonali Agarwal, James A. Blackshaw, Vanesa Bol, Audrey Fazzi, Filippo Fiorini, Amy Louise Foreman, Nancy George, Brett R. Johnson, Brian Martin, Dave McComb, Euphemia Mutasa-Gottgens, Helen Parkinson, Martin Romacker, Rolf Russell, Valérien Ségard, Shawn Zheng Kai Tan, Wei Kheng Teh, F. P. Winstanley, Benedict Wong, Adrian M. Smith
2023	—	`ed.`	14th International Conference on Semantic Web Applications and Tools for Health Care and Life Sciences (SWAT4HCLS 2023), Basel, Switzerland, February 13-16, 2023. SWAT4HCLS Atsuko Yamaguchi, Andrea Splendiani, M. Scott Marshall, Chris Baker, Jerven T. Bolleman, Albert Burger, Leyla Jael Castro, Ole Eigenbrod, Sabine Österle, Martin Romacker, Andra Waagmeester
2022	—	`conf`	FAIR Data APIs in the FAIR in Vivo Data Sharing Platform. SEMANTiCS (Posters & Demos) Felix Schwagereit, Martin Romacker, Fabien Richard, Robert Trypuz, Thomas Liener, Olivier Roche
2017	J	`jnl`	Matching disease and phenotype ontologies in the ontology alignment evaluation initiative. J. Biomed. Semant. Ian Harrow, Ernesto Jiménez-Ruiz, Andrea Splendiani, Martin Romacker, Peter Woollard, Scott Markel, Yasmin Alam-Faruque, Martin Koch, James Malone, Arild Waaler
2017	—	`conf`	Semantic Terminology Management for Applications: Contextualized SKOS-XL. ISWC (Posters, Demos & Industry Tracks) Andreas Thalhammer, Martin Romacker, Joachim Rupp
2016	J	`jnl`	Flexible data integration and curation using a graph-based approach. Bioinform. Samuel Croset, Joachim Rupp, Martin Romacker
2016	—	`conf`	Introducing the disease and phenotype OAEI track. OM@ISWC Ian Harrow, Ernesto Jiménez-Ruiz, Andrea Splendiani, Martin Romacker, Stefan Negru, Peter Woollard, Scott Markel, Yasmin Alam-Faruque, Martin Koch, Erfan Younesi, James Malone
2016	—	`conf`	Ontologies Guidelines and Evaluation of Ontologies Mapping Tools and Algorithms. SWAT4LS Ian Harrow, Martin Romacker, Andrea Splendiani, Stefan Negru, Peter Woollard, Scott Markel, Yasmin Alam-Faruque, Martin Koch, Erfan Younesi, James Malone, Ernesto Jiménez-Ruiz
2016	—	`conf`	Ontologies Guidelines for Best Practice and a Process to Evaluate Existing Ontologies Mapping Tools and Algorithms. ISWC (Posters & Demos) Ian Harrow, Martin Romacker, Andrea Splendiani, Stefan Negru, Peter Woollard, Scott Markel, Yasmin Alam-Faruque, Martin Koch, Erfan Younesi, James Malone, Ernesto Jiménez-Ruiz
2014	J	`jnl`	Evolving BioAssay Ontology (BAO): modularization, integration and applications. J. Biomed. Semant. Saminda Abeyruwan, Uma D. Vempati, Hande Küçük-McGinty, Ubbo Visser, Amar Koleti, Ahsan Mir, Kunie Sakurai, Caty Chung, Joshua A. Bittker, Paul A. Clemons, Steve Brudz, Anosha Siripala, Arturo J. Morales, Martin Romacker, David Twomey, Svetlana Bureeva, Vance P. Lemmon, Stephan C. Schürer
2014	J	`jnl`	OntoGene web services for biomedical text mining. BMC Bioinform. Fabio Rinaldi, Simon Clematide, Hernani Marques, Tilia Ellendorff, Martin Romacker, Raul Rodriguez-Esteban
2013	J	`jnl`	Using the OntoGene pipeline for the triage task of BioCreative 2012. Database J. Biol. Databases Curation Fabio Rinaldi, Simon Clematide, Simon Hafner, Gerold Schneider, Gintare Grigonyte, Martin Romacker, Thérèse Vachon
2011	J	`jnl`	The gene normalization task in BioCreative III. BMC Bioinform. Zhiyong Lu, Hung-Yu Kao, Chih-Hsuan Wei, Minlie Huang, Jingchen Liu, Cheng-Ju Kuo, Chun-Nan Hsu, Richard Tzong-Han Tsai, Hong-Jie Dai, Naoaki Okazaki, Han-Cheol Cho, Martin Gerner, Illés Solt, Shashank Agarwal, Feifan Liu, Dina Vishnyakova, Patrick Ruch, Martin Romacker, Fabio Rinaldi, Sanmitra Bhattacharya, Padmini Srinivasan, Hongfang Liu, Manabu Torii, Sérgio Matos, David Campos, Karin Verspoor, Kevin M. Livingston, W. John Wilbur
2010	J	`jnl`	OntoGene in BioCreative II.5. IEEE ACM Trans. Comput. Biol. Bioinform. Fabio Rinaldi, Gerold Schneider, Kaarel Kaljurand, Simon Clematide, Thérèse Vachon, Martin Romacker
2008	—	`conf`	A Unified Conceptual Model for Representation of Terminologies and References of Terms across Data Repositories in Biomedicine. ICSC Martin Romacker, Angela Fahrni, Thérèse Vachon
2006	—	`conf`	An Environment for Relation Mining over Richly Annotated Corpora: the case of GENIA. SMBM Fabio Rinaldi, Gerold Schneider, Kaarel Kaljurand, Michael Hess, Martin Romacker
2006	J	`jnl`	An environment for relation mining over richly annotated corpora: the case of GENIA. BMC Bioinform. Fabio Rinaldi, Gerold Schneider, Kaarel Kaljurand, Michael Hess, Martin Romacker
2006	B	`conf`	Semantic Atomicity and Multilinguality in the Medical Domain: Design Considerations for the MorphoSaurus Subword Lexicon. LREC Stefan Schulz, Kornél G. Markó, Philipp Daumke, Udo Hahn, Susanne Hanser, Percy Nohama, Roosewelt L. Andrade, Edson José Pacheco, Martin Romacker
2002	Misc	`conf`	Creating Knowledge Repositories from Biomedical Reports: The MEDSYNDIKATE Text Mining System. Pacific Symposium on Biocomputing Udo Hahn, Martin Romacker, Stefan Schulz
2002	Misc	`conf`	MORPHOSAURUS: Crosslingual Medical Text Retrieval by Subword Indexing. AMIA Stefan Schulz, Rüdiger Klar, Udo Hahn, Martin Romacker, Percy Nohama, Lúcio J. Dias Matias
2002	J	`jnl`	MedSynDikate - a natural language system for the extraction of medical information from findings reports. Int. J. Medical Informatics Udo Hahn, Martin Romacker, Stefan Schulz
2001	Misc	`conf`	Computing in Formal Knowledge Base Contexts for Natural Language Ambiguity Resolution. FLAIRS Udo Hahn, Martin Romacker
2001	—	`conf`	Context-Based Ambiguity Management for Natural Language Processing. CONTEXT Martin Romacker, Udo Hahn
2001	—	`—`	Ebenen der Semantikintegration im Textverstehenssystem SYNDIKATE. Martin Romacker
2001	Misc	`conf`	Empirical data for the semantic interpretation of prepositional phrases in medical documents. AMIA Martin Romacker, Udo Hahn
2001	B	`conf`	Semantic Interpretation of Medical Language - Quantitative Analysis and Qualitative Yield. AIME Martin Romacker, Udo Hahn
2001	—	`conf`	The SynDiKATe Text Knowledge Base Generator. HLT Udo Hahn, Martin Romacker
2000	—	`conf`	An Empirical Assessment of Semantic Interpretation. ANLP Martin Romacker, Udo Hahn
2000	B	`conf`	An Integrated Model of Semantic and Conceptual Interpretation from Dependency Structures. COLING Udo Hahn, Martin Romacker
2000	J	`jnl`	Content management in the SYNDIKATE system - How technical documents are automatically transformed to text knowledge bases. Data Knowl. Eng. Udo Hahn, Martin Romacker
2000	C	`conf`	Coping with Different Types of Ambiguity Using a Uniform Context Handling Mechanism. NLDB Martin Romacker, Udo Hahn
2000	Misc	`conf`	MedSynDiKATe-design considerations for an ontology-based medical text understanding system. AMIA Udo Hahn, Martin Romacker, Stefan Schulz
2000	Misc	`conf`	Modeling anatomical spatial relations with description logics. AMIA Stefan Schulz, Udo Hahn, Martin Romacker
2000	—	`conf`	On "deep" knowledge extraction from documents. RIAO Udo Hahn, Martin Romacker
1999	Misc	`conf`	Automatic Import and Manual Refinement of Medical Knowledge. AMIA Stefan Schulz, Giovanni Faggioli, Martin Romacker, Udo Hahn
1999	J	`jnl`	Discourse structures in medical reports - Watch out! The generation of referentially coherent and valid text knowledge bases in the medSYNDIKATE system. Int. J. Medical Informatics Udo Hahn, Martin Romacker, Stefan Schulz
1999	J	`jnl`	How knowledge drives understandingmatching medical ontologies with the needs of medical language processing. Artif. Intell. Medicine Udo Hahn, Martin Romacker, Stefan Schulz
1999	A*	`conf`	Lean Semantic Interpretation. IJCAI Martin Romacker, Udo Hahn, Katja Markert
1999	J	`jnl`	Part-Whole Reasoning: A Case Study in Medical Ontology Engineering. IEEE Intell. Syst. Udo Hahn, Stefan Schulz, Martin Romacker
1999	—	`conf`	Partonomic Reasoning as Taxonomic Reasoning in Medicine. AAAI/IAAI Udo Hahn, Stefan Schulz, Martin Romacker
1999	—	`conf`	Small Is Beautiful - Compact Semantics for Medical Language Processing. AIMDM Martin Romacker, Stefan Schulz, Udo Hahn
1999	Misc	`conf`	Streamlining semantic interpretation for medical narratives. AMIA Martin Romacker, Stefan Schulz, Udo Hahn
1999	C	`conf`	Text Understanding for Knowledge Base Generation in the SYNDIKATE System. DEXA Udo Hahn, Martin Romacker
1999	—	`conf`	Towards a Multilingual Morpheme Thesaurus for Medical Free-Text Retrieval. MIE Stefan Schulz, Martin Romacker, Pius Franz, Albrecht Zaiss, Rüdiger Klar, Udo Hahn
1998	J	`jnl`	Automatische Erzeugung von medizinischen Wissensbasen durch partielles Textverstehen: Befundtextanalyse im MedSyndikate-System. Künstliche Intell. Udo Hahn, Martin Romacker
1998	Misc	`conf`	Part-Whole Reasoning in Medical Knowledge Bases Using Description Logics. KI Stefan Schulz, Martin Romacker, Udo Hahn
1998	Misc	`conf`	Part-whole reasoning in medical ontologies revisited-introducing SEP triplets into classification-based description logics. AMIA Stefan Schulz, Martin Romacker, Udo Hahn
1998	—	`conf`	Why Discourse Structures in Medical Reports Matter for the Validity of Automatically Generated Text Knowledge Bases. MedInfo Udo Hahn, Martin Romacker, Stefan Schulz
1997	Misc	`conf`	Text structures in medical text processing: empirical evidence and a text understanding prototype. AMIA Udo Hahn, Martin Romacker