Martin Maska - RankMe

31 papers B 3C 2Journal 10Unranked 16

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	DeepFuse: A multi-rater fusion and refinement network for computing silver-standard annotations. Comput. Biol. Medicine Cem Emre Akbas, Vladimír Ulman, Martin Maska, Michal Kozubek
2025	J	`jnl`	Medical Imaging AI Competitions Lack Fairness. CoRR Annika Reinke, Evangelia Christodoulou, Sthuthi Sadananda, A. Emre Kavur, Khrystyna Faryna, Daan Schouten, Bennett A. Landman, Carole H. Sudre, Olivier Colliot, Nicholas Heller, Sophie Loizillon, Martin Maska, Maëlys Solal, Arya Yazdan Panah, Vilma Bozgo, Ömer Sümer, Siem de Jong, Sophie Fischer, Michal Kozubek, Tim Rädsch, Nadim Hammoud, Fruzsina Molnár-Gábor, Steven Hicks, Michael A. Riegler, Anindo Saha, Vajira Thambawita, Pål Halvorsen, Amelia Jiménez-Sánchez, Qingyang Yang, Veronika Cheplygina, Sabrina Bottazzi, Alexander Seitel, Spyridon Bakas, Alexandros Karargyris, Kiran Vaidhya Venkadesh, Bram van Ginneken, Lena Maier-Hein
2023	J	`jnl`	Segmentation and Tracking of Mammary Epithelial Organoids in Brightfield Microscopy. IEEE Trans. Medical Imaging Lucia Hradecká, David Wiesner, Jakub Sumbal, Zuzana Sumbalova Koledova, Martin Maska
2020	J	`jnl`	BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows. Patterns Ulysse Rubens, Romain Mormont, Lassi Paavolainen, Volker Bäcker, Benjamin Pavie, Leandro A. Scholz, Gino Michiels, Martin Maska, Devrim Ünay, Graeme Ball, Renaud Hoyoux, Rémy Vandaele, Ofra Golani, Stefan G. Stanciu, Natasa Sladoje, Perrine Paul-Gilloteaux, Raphaël Marée, Sébastien Tosi
2019	J	`jnl`	3-D Quantification of Filopodia in Motile Cancer Cells. IEEE Trans. Medical Imaging Carlos Castilla, Martin Maska, Dmitry V. Sorokin, Erik Meijering, Carlos Ortiz-de-Solorzano
2019	J	`jnl`	CytoPacq: a web-interface for simulating multi-dimensional cell imaging. Bioinform. David Wiesner, David Svoboda, Martin Maska, Michal Kozubek
2019	B	`conf`	Toward Robust Fully 3D Filopodium Segmentation and Tracking in Time-Lapse Fluorescence Microscopy. ICIP Martin Maska, Tereza Necasová, David Wiesner, Dmitry V. Sorokin, Igor Peterlík, Vladimír Ulman, David Svoboda
2018	—	`conf`	Automatic Fusion of Segmentation and Tracking Labels. ECCV Workshops (6) Cem Emre Akbas, Vladimír Ulman, Martin Maska, Florian Jug, Michal Kozubek
2018	J	`jnl`	FiloGen: A Model-Based Generator of Synthetic 3-D Time-Lapse Sequences of Single Motile Cells With Growing and Branching Filopodia. IEEE Trans. Medical Imaging Dmitry V. Sorokin, Igor Peterlík, Vladimír Ulman, David Svoboda, Tereza Necasová, Katsiarina Morgaenko, Lívia Eiselleová, Lenka Tesarová, Martin Maska
2018	—	`conf`	Model-Based Generation of Synthetic 3D Time-Lapse Sequences of Multiple Mutually Interacting Motile Cells with Filopodia. SASHIMI@MICCAI Igor Peterlík, David Svoboda, Vladimír Ulman, Dmitry V. Sorokin, Martin Maska
2018	—	`conf`	Segmentation of actin-stained 3D fluorescent cells with filopodial protrusions using convolutional neural networks. ISBI Carlos Castilla, Martin Maska, Dmitry V. Sorokin, Erik Meijering, Carlos Ortiz-de-Solorzano
2017	—	`conf`	Model-based generation of synthetic 3D time-lapse sequences of motile cells with growing filopodia. ISBI Dmitry V. Sorokin, Igor Peterlík, Vladimír Ulman, David Svoboda, Martin Maska
2017	—	`conf`	Particle Tracking Accuracy Measurement Based on Comparison of Linear Oriented Forests. ICCV Workshops Martin Maska, Pavel Matula
2016	—	`conf`	Automatic Detection and Segmentation of Exosomes in Transmission Electron Microscopy. ECCV Workshops (1) Karel Stepka, Martin Maska, Jakub Jozef Pálenik, Vendula Pospíchalová, Anna Kotrbová, Ladislav Ilkovics, Dobromila Klemová, Ales Hampl, Vítezslav Bryja, Pavel Matula
2015	—	`conf`	Characterization of the role of collagen network structure and composition in cancer cell migration. EMBC María Anguiano, Carlos Castilla, Martin Maska, Cristina Ederra, Javier Fernández-Marqués, Rafael Peláez, Ana Rouzaut, Arrate Muñoz-Barrutia, Michal Kozubek, Carlos Ortiz-de-Solorzano
2015	B	`conf`	Quantification of the 3D collagen network geometry in confocal reflection microscopy. ICIP Martin Maska, Cristina Ederra, Javier Fernández-Marqués, Arrate Muñoz-Barrutia, Michal Kozubek, Carlos Ortiz-de-Solorzano
2014	J	`jnl`	A benchmark for comparison of cell tracking algorithms. Bioinform. Martin Maska, Vladimír Ulman, David Svoboda, Pavel Matula, Petr Matula, Cristina Ederra, Ainhoa Urbiola, Tomás España, Subramanian Venkatesan, Deepak M. W. Balak, Pavel Karas, Tereza Bolcková, Markéta Streitová, Craig Carthel, Stefano Coraluppi, Nathalie Harder, Karl Rohr, Klas E. G. Magnusson, Joakim Jaldén, Helen M. Blau, Oleh Dzyubachyk, Pavel Krízek, Guy M. Hagen, David Pastor-Escuredo, Daniel Jimenez-Carretero, María J. Ledesma-Carbayo, Arrate Muñoz-Barrutia, Erik Meijering, Michal Kozubek, Carlos Ortiz-de-Solorzano
2014	B	`conf`	On proper simulation of phenomena influencing image formation in fluorescence microscopy. ICIP David Svoboda, Vladimír Ulman, Ludek Matyska, Martin Maska, Jan Bella, Stanislav Stejskal
2013	—	`conf`	Automatic quantification of filopodia-based cell migration. ISBI Martin Maska, Xabier Morales, Arrate Muñoz-Barrutia, Ana Rouzaut, Carlos Ortiz-de-Solorzano
2013	J	`jnl`	Segmentation and Shape Tracking of Whole Fluorescent Cells Based on the Chan-Vese Model. IEEE Trans. Medical Imaging Martin Maska, Ondrej Danek, Saray Garasa, Ana Rouzaut, Arrate Muñoz-Barrutia, Carlos Ortiz-de-Solorzano
2012	—	`conf`	Fast tracking of fluorescent cells based on the Chan-Vese model. ISBI Martin Maska, Arrate Muñoz-Barrutia, Carlos Ortiz-de-Solorzano
2012	J	`jnl`	Smooth Chan-Vese segmentation via graph cuts. Pattern Recognit. Lett. Ondrej Danek, Pavel Matula, Martin Maska, Michal Kozubek
2010	—	`conf`	A Fast Level Set-Like Algorithm for Region-Based Active Contours. ISVC (3) Martin Maska, Pavel Matula, Ondrej Danek, Michal Kozubek
2010	—	`conf`	A Simple Topology Preserving Max-Flow Algorithm for Graph Cut Based Image Segmentation. MEMICS Ondrej Danek, Martin Maska
2010	—	`conf`	Simultaneous Tracking of Multiple Objects Using Fast Level Set-Like Algorithm. MEMICS Martin Maska, Pavel Matula, Michal Kozubek
2009	C	`conf`	A Fast Level Set-Like Algorithm with Topology Preserving Constraint. CAIP Martin Maska, Pavel Matula
2009	—	`conf`	A Two-Phase Segmentation of Cell Nuclei Using Fast Level Set-Like Algorithms. SCIA Martin Maska, Ondrej Danek, Carlos Ortiz-de-Solorzano, Arrate Muñoz-Barrutia, Michal Kozubek, Ignacio Fernández García
2009	—	`conf`	Acquiarium: Free Software for the Acquisition and Analysis of 3D Images of Cells in Fluorescence Microscopy. ISBI Pavel Matula, Martin Maska, Ondrej Danek, Petr Matula, Michal Kozubek
2009	—	`conf`	Segmentation of Touching Cell Nuclei Using a Two-Stage Graph Cut Model. SCIA Ondrej Danek, Pavel Matula, Carlos Ortiz-de-Solorzano, Arrate Muñoz-Barrutia, Martin Maska, Michal Kozubek
2007	—	`conf`	A Comparison of Fast Level Set-Like Algorithms for Image Segmentation in Fluorescence Microscopy. ISVC (2) Martin Maska, Jan Hubený, David Svoboda, Michal Kozubek
2007	C	`conf`	On Simulating 3D Fluorescent Microscope Images. CAIP David Svoboda, Marek Kasík, Martin Maska, Jan Hubený, Stanislav Stejskal, Michal Zimmermann