Martin D. Muggli

11 papers C 3Journal 8
YearRankTypeTitle / Venue / Authors
2021 J jnl
Metagenome SNP calling via read-colored de Bruijn graphs.
Bioinform.
Bahar Alipanahi, Martin D. Muggli, Musa Jundi, Noelle R. Noyes, Christina Boucher
2020 J jnl
Fast and accurate correction of optical mapping data via spaced seeds.
Bioinform.
Leena Salmela, Kingshuk Mukherjee, Simon J. Puglisi, Martin D. Muggli, Christina Boucher
2020 J jnl
Fast and accurate correction of optical mapping data via spaced seeds.
Bioinform.
Leena Salmela, Kingshuk Mukherjee, Simon J. Puglisi, Martin D. Muggli, Christina Boucher
2019 J jnl
Building large updatable colored de Bruijn graphs via merging.
Bioinform.
Martin D. Muggli, Bahar Alipanahi, Christina Boucher
2019 J jnl
Kohdista: an efficient method to index and query possible Rmap alignments.
Algorithms Mol. Biol.
Martin D. Muggli, Simon J. Puglisi, Christina Boucher
2018 C conf
A Succinct Solution to Rmap Alignment.
WABI
Martin D. Muggli, Simon J. Puglisi, Christina Boucher
2017 C conf
Disentangled Long-Read De Bruijn Graphs via Optical Maps.
WABI
Bahar Alipanahi, Leena Salmela, Simon J. Puglisi, Martin D. Muggli, Christina Boucher
2017 J jnl
Succinct colored de Bruijn graphs.
Bioinform.
Martin D. Muggli, Alexander Bowe, Noelle R. Noyes, Paul S. Morley, Keith E. Belk, Robert Raymond, Travis Gagie, Simon J. Puglisi, Christina Boucher
2015 J jnl
Misassembly detection using paired-end sequence reads and optical mapping data.
Bioinform.
Martin D. Muggli, Simon J. Puglisi, Roy Ronen, Christina Boucher
2014 C conf
Efficient Indexed Alignment of Contigs to Optical Maps.
WABI
Martin D. Muggli, Simon J. Puglisi, Christina Boucher
2014 J jnl
Misassembly Detection using Paired-End Sequence Reads and Optical Mapping Data.
CoRR
Martin D. Muggli, Simon J. Puglisi, Roy Ronen, Christina Boucher