Martin Berzins

105 papers A 3B 1C 2Misc 6Journal 46Unranked 46

Year	Rank	Type	Title / Venue / Authors
2024	J	`jnl`	Algorithm 1041: HiPPIS - A High-order Positivity-preserving Mapping Software for Structured Meshes. ACM Trans. Math. Softw. Timbwoga A. J. Ouermi, Robert M. Kirby, Martin Berzins
2024	J	`jnl`	An Illustration of Extending Hedgehog to Multi-Node GPU Architectures Using GEMM. SN Comput. Sci. Nitish Shingde, Timothy Blattner, Alexandre Bardakoff, Walid Keyrouz, Martin Berzins
2024	—	`conf`	Lessons Learned and Scalability Achieved When Porting Uintah to DOE Exascale Systems. Euro-Par Workshops (1) John K. Holmen, Marta García, Allen Sanderson, Abhishek Bagusetty, Martin Berzins
2024	A	`conf`	Monotone Operator Theory-Inspired Message Passing for Learning Long-Range Interaction on Graphs. AISTATS Justin M. Baker, Qingsong Wang, Martin Berzins, Thomas Strohmer, Bao Wang
2023	J	`jnl`	Algorithm xxxx: HiPPIS A High-Order Positivity-Preserving Mapping Software for Structured Meshes. CoRR Timbwaoga A. J. Ouermi, Robert M. Kirby, Martin Berzins
2023	J	`jnl`	ENO-based high-order data-bounded and constrained positivity-preserving interpolation. Numer. Algorithms T. A. J. Ouermi, Robert M. Kirby, Martin Berzins
2023	—	`conf`	Extending Hedgehog's Dataflow Graphs to Multi-node GPU Architectures. WAMTA Nitish Shingde, Martin Berzins, Timothy Blattner, Walid Keyrouz, Alexandre Bardakoff
2023	—	`conf`	Making Uintah Performance Portable for Department of Energy Exascale Testbeds. Euro-Par Workshops John K. Holmen, Marta García, Abhishek Bagusetty, Allen Sanderson, Martin Berzins
2023	—	`conf`	Strengthening the US Department of Energy's Recruitment Pipeline: The DOE/NNSA Predictive Science Academic Alliance Program (PSAAP) Experience. PEARC John K. Holmen, Verónica G. Vergara Larrea, Erik W. Draeger, Eric T. Phipps, Philip J. Smith, Martin Berzins, Sean T. Smith, Jeremy N. Thornock, Suzanne Parete-Koon
2022	J	`jnl`	ENO-Based High-Order Data-Bounded and Constrained Positivity-Preserving Interpolation. CoRR Timbwaoga A. J. Ouermi, Robert M. Kirby, Martin Berzins
2022	—	`conf`	Porting uintah to heterogeneous systems. PASC John K. Holmen, Damodar Sahasrabudhe, Martin Berzins
2021	—	`conf`	A Heterogeneous MPI+PPL Task Scheduling Approach for Asynchronous Many-Task Runtime Systems. PEARC John K. Holmen, Damodar Sahasrabudhe, Martin Berzins
2021	J	`jnl`	Logically Parallel Communication for Fast MPI+Threads Applications. IEEE Trans. Parallel Distributed Syst. Rohit Zambre, Damodar Sahasrabudhe, Hui Zhou, Martin Berzins, Aparna Chandramowlishwaran, Pavan Balaji
2021	J	`jnl`	Optimizing the hypre solver for manycore and GPU architectures. J. Comput. Sci. Damodar Sahasrabudhe, Rohit Zambre, Aparna Chandramowlishwaran, Martin Berzins
2021	J	`jnl`	Structured Adaptive Mesh Refinement Adaptations to Retain Performance Portability With Increasing Heterogeneity. Comput. Sci. Eng. Anshu Dubey, Martin Berzins, Carsten Burstedde, Michael L. Norman, Didem Unat, Mohamed Wahib
2020	—	`conf`	Improving Performance of the Hypre Iterative Solver for Uintah Combustion Codes on Manycore Architectures Using MPI Endpoints and Kernel Consolidation. ICCS (1) Damodar Sahasrabudhe, Martin Berzins
2020	J	`jnl`	Numerical Testing of a New Positivity-Preserving Interpolation Algorithm. CoRR T. A. J. Ouermi, Robert M. Kirby, Martin Berzins
2019	—	`conf`	A Portable SIMD Primitive Using Kokkos for Heterogeneous Architectures. WACCPD@SC Damodar Sahasrabudhe, Eric T. Phipps, Sivasankaran Rajamanickam, Martin Berzins
2019	—	`conf`	An Approach for Indirectly Adopting a Performance Portability Layer in Large Legacy Codes. P3HPC@SC John K. Holmen, Brad Peterson, Martin Berzins
2019	—	`conf`	An Evaluation of An Asynchronous Task Based Dataflow Approach For Uintah. COMPSAC (2) Alan Humphrey, Martin Berzins
2019	J	`jnl`	Automatic Halo Management for the Uintah GPU-Heterogeneous Asynchronous Many-Task Runtime. Int. J. Parallel Program. Brad Peterson, Alan Humphrey, Daniel Sunderland, James C. Sutherland, Tony Saad, Harish Kumar Dasari, Martin Berzins
2019	J	`jnl`	Node failure resiliency for Uintah without checkpointing. Concurr. Comput. Pract. Exp. Damodar Sahasrabudhe, Martin Berzins, John A. Schmidt
2018	—	`conf`	A Preliminary Port and Evaluation of the Uintah AMT Runtime on Sunway TaihuLight. IPDPS Workshops Zhang Yang, Damodar Sahasrabudhe, Alan Humphrey, Martin Berzins
2018	J	`jnl`	Demonstrating GPU code portability and scalability for radiative heat transfer computations. J. Comput. Sci. Brad Peterson, Alan Humphrey, John K. Holmen, Todd Harman, Martin Berzins, Daniel Sunderland, H. Carter Edwards
2018	J	`jnl`	Performance Optimization Strategies for WRF Physics Schemes Used in Weather Modeling. Int. J. Netw. Comput. T. A. J. Ouermi, Robert M. Kirby, Martin Berzins
2018	—	`conf`	Scalable Data Management of the Uintah Simulation Framework for Next-Generation Engineering Problems with Radiation. SCFA Sidharth Kumar, Alan Humphrey, Will Usher, Steve Petruzza, Brad Peterson, John A. Schmidt, Derek Harris, Ben Isaac, Jeremy Thornock, Todd Harman, Valerio Pascucci, Martin Berzins
2017	—	`conf`	Addressing Global Data Dependencies in Heterogeneous Asynchronous Runtime Systems on GPUs. ESPM2@SC Brad Peterson, Alan Humphrey, John A. Schmidt, Martin Berzins
2017	—	`conf`	Improving Uintah's Scalability Through the Use of Portable Kokkos-Based Data Parallel Tasks. PEARC John K. Holmen, Alan Humphrey, Daniel Sunderland, Martin Berzins
2017	—	`conf`	OpenMP 4 Fortran Modernization of WSM6 for KNL. PEARC T. A. J. Ouermi, Aaron Knoll, Robert M. Kirby, Martin Berzins
2017	—	`conf`	Optimization Strategies for WRF Single-Moment 6-Class Microphysics Scheme (WSM6) on Intel Microarchitectures. CANDAR T. A. J. Ouermi, Aaron Knoll, Robert M. Kirby, Martin Berzins
2016	J	`jnl`	A Survey of High Level Frameworks in Block-Structured Adaptive Mesh Refinement Packages. CoRR Anshu Dubey, Ann S. Almgren, John B. Bell, Martin Berzins, Steven R. Brandt, Greg Bryan, Phillip Colella, Daniel T. Graves, Michael Lijewski, Frank Löffler, Brian W. O'Shea, Erik Schnetter, Brian van Straalen, Klaus Weide
2016	—	`conf`	An Overview of Performance Portability in the Uintah Runtime System through the Use of Kokkos. ESPM2@SC Daniel Sunderland, Brad Peterson, John A. Schmidt, Alan Humphrey, Jeremy Thornock, Martin Berzins
2016	J	`jnl`	Extending the Uintah Framework through the Petascale Modeling of Detonation in Arrays of High Explosive Devices. SIAM J. Sci. Comput. Martin Berzins, Jacqueline C. Beckvermit, Todd Harman, Andrew Bezdjian, Alan Humphrey, Qingyu Meng, John A. Schmidt, Charles A. Wight
2016	—	`conf`	Radiative Heat Transfer Calculation on 16384 GPUs Using a Reverse Monte Carlo Ray Tracing Approach with Adaptive Mesh Refinement. IPDPS Workshops Alan Humphrey, Daniel Sunderland, Todd Harman, Martin Berzins
2015	C	`conf`	A Scalable Algorithm for Radiative Heat Transfer Using Reverse Monte Carlo Ray Tracing. ISC Alan Humphrey, Todd Harman, Martin Berzins, Philip J. Smith
2015	—	`conf`	Reducing overhead in the Uintah framework to support short-lived tasks on GPU-heterogeneous architectures. WOLFHPC@SC Brad Peterson, Harish Kumar Dasari, Alan Humphrey, James C. Sutherland, Tony Saad, Martin Berzins
2014	J	`jnl`	A survey of high level frameworks in block-structured adaptive mesh refinement packages. J. Parallel Distributed Comput. Anshu Dubey, Ann S. Almgren, John B. Bell, Martin Berzins, Steven R. Brandt, Greg Bryan, Phillip Colella, Daniel T. Graves, Michael Lijewski, Frank Löffler, Brian W. O'Shea, Erik Schnetter, Brian van Straalen, Klaus Weide
2014	C	`conf`	Fast Multiresolution Reads of Massive Simulation Datasets. ISC Sidharth Kumar, Cameron Christensen, John A. Schmidt, Peer-Timo Bremer, Eric Brugger, Venkatram Vishwanath, Philip H. Carns, Hemanth Kolla, Ray W. Grout, Jacqueline Chen, Martin Berzins, Giorgio Scorzelli, Valerio Pascucci
2014	—	`conf`	MapGraph - Graphprocessing at 30 Billion Edges per Second on NVIDIA GPUs. ISWC (Industry Track) Zhisong Fu, Harish Kumar Dasari, Bradley R. Bebee, Martin Berzins, Bryan B. Thompson
2014	—	`conf`	Parallel Breadth First Search on GPU clusters. IEEE BigData Zhisong Fu, Harish Kumar Dasari, Bradley R. Bebee, Martin Berzins, Bryan B. Thompson
2014	J	`jnl`	Scalable large-scale fluid-structure interaction solvers in the Uintah framework via hybrid task-based parallelism algorithms. Concurr. Comput. Pract. Exp. Qingyu Meng, Martin Berzins
2014	J	`jnl`	Systematic Debugging Methods for Large-Scale HPC Computational Frameworks. Comput. Sci. Eng. Alan Humphrey, Qingyu Meng, Martin Berzins, Diego Caminha Barbosa De Oliveira, Zvonimir Rakamaric, Ganesh Gopalakrishnan
2014	—	`conf`	Systematic Debugging of Concurrent Systems Using Coalesced Stack Trace Graphs. LCPC Diego Caminha Barbosa De Oliveira, Zvonimir Rakamaric, Ganesh Gopalakrishnan, Alan Humphrey, Qingyu Meng, Martin Berzins
2013	Misc	`conf`	Applying High-Performance Computing to Petascale Explosive Simulations. ICCS Joseph R. Peterson, Charles A. Wight, Martin Berzins
2013	J	`jnl`	Data and range-bounded polynomials in ENO methods. J. Comput. Sci. Martin Berzins
2013	A	`conf`	Investigating applications portability with the Uintah DAG-based runtime system on PetaScale supercomputers. SC Qingyu Meng, Alan Humphrey, John A. Schmidt, Martin Berzins
2013	B	`conf`	Large Scale Parallel Solution of Incompressible Flow Problems Using Uintah and Hypre. CCGRID John A. Schmidt, Martin Berzins, Jeremy Thornock, Tony Saad, James C. Sutherland
2013	J	`jnl`	Multiscale Modeling of Accidental Explosions and Detonations. Comput. Sci. Eng. Jacqueline C. Beckvermit, Joseph R. Peterson, Todd Harman, Scott Bardenhagen, Charles A. Wight, Qingyu Meng, Martin Berzins
2013	—	`conf`	Practical formal correctness checking of million-core problem solving environments for HPC. SE-CSE@ICSE Diego Caminha Barbosa De Oliveira, Zvonimir Rakamaric, Ganesh Gopalakrishnan, Alan Humphrey, Qingyu Meng, Martin Berzins
2013	—	`conf`	Preliminary experiences with the uintah framework on Intel Xeon Phi and stampede. XSEDE Qingyu Meng, Alan Humphrey, John A. Schmidt, Martin Berzins
2013	—	`conf`	The influence of an applied heat flux on the violence of reaction of an explosive device. XSEDE Monica Hall, Jacqueline C. Beckvermit, Charles A. Wight, Todd Harman, Martin Berzins
2012	—	`conf`	Abstract: Uintah Hybrid Task-Based Parallelism Algorithm. SC Companion Qingyu Meng, Martin Berzins
2012	J	`jnl`	Adaptive high-order Discontinuous Galerkin solution of elastohydrodynamic lubrication point contact problems. Adv. Eng. Softw. H. Lu, Martin Berzins, Christopher E. Goodyer, Peter K. Jimack
2012	—	`conf`	Multiscale modeling of high explosives for transportation accidents. XSEDE Joseph R. Peterson, Jacqueline C. Beckvermit, Todd Harman, Martin Berzins, Charles A. Wight
2012	—	`conf`	Poster: Uintah Hybrid Task-Based Parallelism Algorithm. SC Companion Qingyu Meng, Martin Berzins
2012	—	`conf`	Radiation modeling using the Uintah heterogeneous CPU/GPU runtime system. XSEDE Alan Humphrey, Qingyu Meng, Martin Berzins, Todd Harman
2011	—	`conf`	DAG-Based Software Frameworks for PDEs. Euro-Par Workshops (1) Martin Berzins, Qingyu Meng, John A. Schmidt, James C. Sutherland
2011	—	`conf`	Introduction. Euro-Par (2) Martin Berzins, Daniela di Serafino, Martin J. Gander, Luc Giraud
2011	J	`jnl`	Scalable parallel regridding algorithms for block-structured adaptive mesh refinement. Concurr. Comput. Pract. Exp. Justin Luitjens, Martin Berzins
2011	—	`conf`	Using hybrid parallelism to improve memory use in the Uintah framework. TG Qingyu Meng, Martin Berzins, John A. Schmidt
2010	—	`conf`	Development of the Uintah Gateway for fluid-structure-interaction problems. TG John A. Schmidt, Martin Berzins
2010	—	`conf`	Dynamic task scheduling for the Uintah framework. MTAGS@SC Qingyu Meng, Justin Luitjens, Martin Berzins
2010	A	`conf`	Improving the performance of Uintah: A large-scale adaptive meshing computational framework. IPDPS Justin Luitjens, Martin Berzins
2010	J	`jnl`	Nonlinear data-bounded polynomial approximations and their applications in ENO methods. Numer. Algorithms Martin Berzins
2010	—	`conf`	Uintah: a scalable framework for hazard analysis. TG Martin Berzins, Justin Luitjens, Qingyu Meng, Todd Harman, Charles A. Wight, Joseph R. Peterson
2007	J	`jnl`	Adaptive Polynomial Interpolation on Evenly Spaced Meshes. SIAM Rev. Martin Berzins
2007	J	`jnl`	On the Role and Place of Computation in Science and Engineering. Comput. Sci. Eng. Martin Berzins, Bradley A. Shadwick, Denis Donnelly
2007	J	`jnl`	Parallel space-filling curve generation through sorting. Concurr. Comput. Pract. Exp. Justin Luitjens, Martin Berzins, Tom Henderson
2007	J	`jnl`	Parallelization and scalability issues of a multilevel elastohydrodynamic lubrication solver. Concurr. Comput. Pract. Exp. Christopher E. Goodyer, Martin Berzins
2007	J	`jnl`	Parallelization and scalability of a spectral element channel flow solver for incompressible Navier-Stokes equations. Concurr. Comput. Pract. Exp. C. W. Hamman, Robert M. Kirby, Martin Berzins
2006	J	`jnl`	A grid-enabled problem solving environment for parallel computational engineering design. Adv. Eng. Softw. Christopher E. Goodyer, Martin Berzins, Peter K. Jimack, L. E. Scales
2006	J	`jnl`	Adaptive Timestepping for Elastohydrodynamic Lubrication Solvers. SIAM J. Sci. Comput. Christopher E. Goodyer, Martin Berzins
2006	Misc	`conf`	Involving Undergraduates in Computational Science and Engineering Research: Successes and Challenges. International Conference on Computational Science (2) Robert M. Kirby, Cullen R. Johnson, Martin Berzins
2006	Misc	`conf`	Mathematical Modelling of Chemical Diffusion through Skin using Grid-based PSEs. HPSC Christopher E. Goodyer, Jason D. Wood, Martin Berzins
2006	—	`ch.`	Solving Computationally Intensive Engineering Problems on the Grid Using Problem Solving Environments. Grid Computing: Software Environments and Tools Christopher E. Goodyer, Martin Berzins
2005	Misc	`conf`	Integrating Teaching and Research in HPC: Experiences and Opportunities. International Conference on Computational Science (2) Martin Berzins, Robert M. Kirby, Cullen R. Johnson
2002	—	`conf`	A Parallel Grid Based PSE for EHL Problems. PARA Christopher E. Goodyer, Jason D. Wood, Martin Berzins
2002	Misc	`conf`	Eclipse and Ellipse: PSEs for EHL Solutions Using IRIS Explorer and SCIRun. International Conference on Computational Science (1) Christopher E. Goodyer, Martin Berzins
2001	J	`jnl`	Review of The Computational Beauty of Nature by Gary William Flake. Artif. Intell. Martin Berzins
2001	Misc	`conf`	The Simulation of Photochemical Smog Episodes in Hungary and Central Europe Using Adaptive Gridding Models. International Conference on Computational Science (2) István Lagzi, Alison S. Tomlin, Tamás Turányi, László Haszpra, Róbert Mészáros, Martin Berzins
2000	J	`jnl`	3-D Multi-scale air pollution modelling using adaptive unstructured meshes. Environ. Model. Softw. Alison S. Tomlin, S. Ghorai, G. Hart, Martin Berzins
2000	J	`jnl`	A Data-Bounded Quadratic Interpolant on Triangles and Tetrahedra. SIAM J. Sci. Comput. Martin Berzins
2000	J	`jnl`	A comparison of some dynamic load-balancing algorithms for a parallel adaptive flow solver. Parallel Comput. Nasir Touheed, Paul M. Selwood, Peter K. Jimack, Martin Berzins
2000	J	`jnl`	Solution-Based Mesh Quality Indicators for Triangular and Tetrahedral Meshes. Int. J. Comput. Geom. Appl. Martin Berzins
1999	—	`conf`	A Structured SADT Approach to the Support of a Parallel Adaptive 3D CFD Code. Euro-Par Jonathan M. Nash, Martin Berzins, Paul M. Selwood
1999	J	`jnl`	Mesh Quality: A Function of Geometry, Error Estimates or Both? Eng. Comput. Martin Berzins
1999	—	`conf`	Parallel Solution of Reacting Flow Problems Using Unstructured Tetrahedral Meshes. PP Martin Berzins, Paul M. Selwood, Jonathan M. Nash
1999	J	`jnl`	Parallel unstructured tetrahedral mesh adaptation: algorithms, implementation and scalability. Concurr. Pract. Exp. Paul M. Selwood, Martin Berzins
1998	J	`jnl`	A Solution-Based Triangular and Tetrahedral Mesh Quality Indicator. SIAM J. Sci. Comput. Martin Berzins
1998	—	`conf`	Mesh Quality: A Function of Geometry, Error Estimates or Both? IMR Martin Berzins
1998	—	`conf`	Portable Parallel Adaptation of Unstructured 3D Meshes. IRREGULAR Paul M. Selwood, Martin Berzins, Jonathan M. Nash, Peter M. Dew
1998	J	`jnl`	SPRINT2D: Adaptive Software for PDEs. ACM Trans. Math. Softw. Martin Berzins, R. Fairlie, S. V. Pennington, J. M. Ware, L. E. Scales
1997	—	`conf`	3D Parallel Mesh Adaptivity: Data-Structures and Algorithms. PP Paul M. Selwood, Martin Berzins, Peter M. Dew
1997	—	`conf`	Parellel Dynamic Load-Balancing for the Solution of Transient CFD Problems Using Adaptive Tetrahedral Meshes. Parallel CFD Nasir Touheed, Paul M. Selwood, Peter K. Jimack, Martin Berzins, Peter M. Dew
1996	—	`conf`	Parallel mesh generation and adaptivity. Parallel CFD Paul M. Selwood, N. A. Verhoeven, Jonathan M. Nash, Martin Berzins, Nigel P. Weatherill, Peter M. Dew, Kenneth Morgan
1996	—	`conf`	SPRINT2D Software for Convection Dominated PDEs. SciTools Martin Berzins, S. V. Pennington, P. R. Pratt, J. M. Ware
1996	J	`jnl`	Shock preserving quadratic interpolation for visualization on triangular meshes. Comput. Graph. Paul Pratt, Martin Berzins
1995	J	`jnl`	Dynamic load-balancing for PDE solvers on adaptive unstructured meshes. Concurr. Pract. Exp. Chris Walshaw, Martin Berzins
1995	J	`jnl`	Temporal Error Control for Convection-Dominated Equations in Two Space Dimensions. SIAM J. Sci. Comput. Martin Berzins
1994	J	`jnl`	New NAG library software for first-order partial differential equations. ACM Trans. Math. Softw. S. V. Pennington, Martin Berzins
1993	—	`conf`	Enhanced Dynamic Load-Balancing of Adaptive Unstructured Meshes. PPSC Chris Walshaw, Martin Berzins
1991	J	`jnl`	Algorithm 690: Chebyshev polynomial software for elliptic-parabolic systems of PDEs. ACM Trans. Math. Softw. Martin Berzins, Peter M. Dew
1991	J	`jnl`	Balancing Space and Time Errors in the Method of Lines for Parabolic Equations. SIAM J. Sci. Comput. Jane Lawson, Martin Berzins, Peter M. Dew
1991	—	`conf`	Visalization and its Use in Scientific Computation. Programming Environments for High-Level Scientific Problem Solving Ken Brodlie, Martin Berzins, Peter M. Dew, A. Poon, Helen Wright
1990	J	`jnl`	A Method for the Spatial Discretization of Parabolic Equations in One Space Variable. SIAM J. Sci. Comput. Robert D. Skeel, Martin Berzins