Marta B. Lopes

28 papers C 1Journal 13Unranked 14

Year	Rank	Type	Title / Venue / Authors
2026	—	`conf`	High Users Management with AI: Predicting Emergency Department Readmission for Resource Optimization. BIOSTEC (4) Inês Gonçalves, Mariana Dias, Inês Metelo, Marta B. Lopes, Luís Silva, Ana Januário, Andreia Mesquita, Carla Menino, Carla Vidinha, Fausto Silva, Mafalda Gonçalves, Maria José Guimarães, Pedro Casimiro, Rui Malha, Ana Londral, Federico Guede-Fernández
2025	J	`jnl`	A novel tool for multi-omics network integration and visualization: A study of glioma heterogeneity. Comput. Biol. Medicine Roberta Coletti, João F. Carrilho, Eduarda P. Martins, Céline S. Gonçalves, Bruno M. Costa, Marta B. Lopes
2025	J	`jnl`	An unsupervised tool for biomarker discovery and cancer subtyping applied to glioblastoma. BioData Min. Roberta Coletti, J. Orestes Cerdeira, Marcos Raydan, Marta B. Lopes
2024	J	`jnl`	Exploring glioma heterogeneity through omics networks: from gene network discovery to causal insights and patient stratification. BioData Min. Nina Kastendiek, Roberta Coletti, Thilo Gross, Marta B. Lopes
2024	J	`jnl`	Priority-Elastic net for binary disease outcome prediction based on multi-omics data. BioData Min. Laila Musib, Roberta Coletti, Marta B. Lopes, Helena Mouriño, Eunice Carrasquinha
2024	—	`conf`	Refining Gene Selection and Outlier Detection in Glioblastoma Based on a Consensus Approach for Regularized Survival Models. IWBBIO (1) João Brandão, Marta B. Lopes, Eunice Carrasquinha
2023	C	`conf`	Causal Graph Discovery for Explainable Insights on Marine Biotoxin Shellfish Contamination. IDEAL Diogo Ribeiro, Filipe Ferraz, Marta B. Lopes, Susana Rodrigues, Pedro Reis Costa, Susana Vinga, Alexandra M. Carvalho
2023	—	`conf`	Comparative Analysis of Machine Learning Models for Time-Series Forecasting of Escherichia Coli Contamination in Portuguese Shellfish Production Areas. LOD (1) Filipe Ferraz, Diogo Ribeiro, Marta B. Lopes, Sónia Pedro, Susana Vinga, Alexandra M. Carvalho
2023	J	`jnl`	Disclosing transcriptomics network-based signatures of glioma heterogeneity using sparse methods. BioData Min. Sofia Martins, Roberta Coletti, Marta B. Lopes
2023	—	`conf`	Evaluating the Causal Role of Environmental Data in Shellfish Biotoxin Contamination on the Portuguese Coast. EPIA (2) Ana Rita Baião, Carolina Peixoto, Marta B. Lopes, Pedro Reis Costa, Alexandra M. Carvalho, Susana Vinga
2023	J	`jnl`	Identification of biomarkers predictive of metastasis development in early-stage colorectal cancer using network-based regularization. BMC Bioinform. Carolina Peixoto, Marta B. Lopes, Marta Martins, Sandra Casimiro, Daniel Sobral, Ana Rita Grosso, Catarina Abreu, Daniela Macedo, Ana Lúcia Costa, Helena Pais, Cecília Alvim, André Mansinho, Pedro Filipe, Pedro Marques da Costa, Afonso Fernandes, Paula Borralho, Cristina Ferreira, João Malaquias, António Quintela, Shannon Kaplan, Mahdi Golkaram, Michael Salmans, Nafeesa Khan, Raakhee Vijayaraghavan, Shile Zhang, Traci Pawlowski, Jim Godsey, Alex So, Li Liu, Luís Costa, Susana Vinga
2023	—	`conf`	Multi-omics Data Integration and Network Inference for Biomarker Discovery in Glioma. EPIA (2) Roberta Coletti, Marta B. Lopes
2023	—	`conf`	Regularized Generalized Linear Models to Disclose Host-Microbiome Associations in Colorectal Cancer. ICoMS Eliana Ibrahimi, Mina Norouzirad, Melisa Meto, Marta B. Lopes
2023	J	`jnl`	Satellite-based feature extraction and multivariate time-series prediction of biotoxin contamination in shellfish. CoRR Sérgio Tavares, Pedro Reis Costa, Ludwig Krippahl, Marta B. Lopes
2022	J	`jnl`	Forecasting biotoxin contamination in mussels across production areas of the Portuguese coast with Artificial Neural Networks. Knowl. Based Syst. Rafaela C. Cruz, Pedro Reis Costa, Ludwig Krippahl, Marta B. Lopes
2020	—	`conf`	Identification of Common Gene Signatures in Microarray and RNA-Sequencing Data Using Network-Based Regularization. IWBBIO Inês Diegues, Susana Vinga, Marta B. Lopes
2020	—	`conf`	Network-Based Variable Selection for Survival Outcomes in Oncological Data. IWBBIO Eunice Carrasquinha, André Veríssimo, Marta B. Lopes, Susana Vinga
2020	J	`jnl`	Tracking intratumoral heterogeneity in glioblastoma via regularized classification of single-cell RNA-Seq data. BMC Bioinform. Marta B. Lopes, Susana Vinga
2019	—	`conf`	On the Role of Hub and Orphan Genes in the Diagnosis of Breast Invasive Carcinoma. LOD Marta B. Lopes, André Veríssimo, Eunice Carrasquinha, Susana Vinga
2019	—	`conf`	Random Sample Consensus for the Robust Identification of Outliers in Cancer Data. CIBB André Veríssimo, Marta B. Lopes, Eunice Carrasquinha, Susana Vinga
2019	J	`jnl`	Twiner: correlation-based regularization for identifying common cancer gene signatures. BMC Bioinform. Marta B. Lopes, Sandra Casimiro, Susana Vinga
2019	J	`jnl`	Twiner: correlation-based regularization for identifying common cancer gene signatures. BMC Bioinform. Marta B. Lopes, Sandra Casimiro, Susana Vinga
2018	J	`jnl`	Ensemble outlier detection and gene selection in triple-negative breast cancer data. BMC Bioinform. Marta B. Lopes, André Veríssimo, Eunice Carrasquinha, Sandra Casimiro, Niko Beerenwinkel, Susana Vinga
2018	J	`jnl`	Identification of influential observations in high-dimensional cancer survival data through the rank product test. BioData Min. Eunice Carrasquinha, André Veríssimo, Marta B. Lopes, Susana Vinga
2018	—	`conf`	Unravelling Breast and Prostate Common Gene Signatures by Bayesian Network Learning. CIBB João Villa-Brito, Marta B. Lopes, Alexandra M. Carvalho, Susana Vinga
2018	—	`conf`	Variable Selection and Outlier Detection in Regularized Survival Models: Application to Melanoma Gene Expression Data. LOD Eunice Carrasquinha, André Veríssimo, Marta B. Lopes, Susana Vinga
2011	—	`conf`	Comparison of near infrared and Raman hyperspectral unmixing performances for chemical identification of pharmaceutical tablets. WHISPERS Marta B. Lopes, José M. Bioucas-Dias, Mário A. T. Figueiredo, Jean-Claude Wolff, Nisha Mistry, John Warrack
2009	—	`conf`	Spectral unmixing via minimum volume simplices: Application to near infrared spectra of counterfeit tablets. WHISPERS Marta B. Lopes, José M. Bioucas-Dias, Mário A. T. Figueiredo, Jean-Claude Wolff