Marquita Ellis

19 papers A 3B 3Journal 7Unranked 6

Year	Rank	Type	Title / Venue / Authors
2025	J	`jnl`	Measuring Agents in Production. CoRR Melissa Z. Pan, Negar Arabzadeh, Riccardo Cogo, Yuxuan Zhu, Alexander Xiong, Lakshya A. Agrawal, Huanzhi Mao, Emma Shen, Sid Pallerla, Liana Patel, Shu Liu, Tianneng Shi, Xiaoyuan Liu, Jared Quincy Davis, Emmanuele Lacavalla, Alessandro Basile, Shuyi Yang, Paul Castro, Daniel Kang, Joseph E. Gonzalez, Koushik Sen, Dawn Song, Ion Stoica, Matei Zaharia, Marquita Ellis
2025	J	`jnl`	Toward Open Earth Science as Fast and Accessible as Natural Language. CoRR Marquita Ellis, Iksha Gurung, Muthukumaran Ramasubramanian, Rahul Ramachandran
2024	—	`conf`	Automated Data Management and Learning-Based Scheduling for Ray-Based Hybrid HPC-Cloud Systems. Euro-Par (1) Tingkai Liu, Huili Tao, Yicheng Lu, Zhongbo Zhu, Marquita Ellis, Sara Kokkila Schumacher, Volodymyr V. Kindratenko
2023	—	`conf`	Cloud-Bursting and Autoscaling for Python-Native Scientific Workflows Using Ray. ISC Workshops Tingkai Liu, Marquita Ellis, Carlos H. A. Costa, Claudia Misale, Sara Kokkila Schumacher, Jinwook Jung, Gi-Joon Nam, Volodymyr V. Kindratenko
2021	—	`conf`	10 Years Later: Cloud Computing is Closing the Performance Gap. ICPE (Companion) Giulia Guidi, Marquita Ellis, Aydin Buluç, Katherine A. Yelick, David E. Culler
2021	B	`conf`	Asynchrony versus bulk-synchrony for a generalized N-body problem from genomics. PPoPP Marquita Ellis, Aydin Buluç, Katherine A. Yelick
2021	—	`conf`	BELLA: Berkeley Efficient Long-Read to Long-Read Aligner and Overlapper. ACDA Giulia Guidi, Marquita Ellis, Daniel Rokhsar, Katherine A. Yelick, Aydin Buluç
2021	A	`conf`	Distributed-Memory k-mer Counting on GPUs. IPDPS Israt Nisa, Prashant Pandey, Marquita Ellis, Leonid Oliker, Aydin Buluç, Katherine A. Yelick
2021	A	`conf`	Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly. IPDPS Giulia Guidi, Oguz Selvitopi, Marquita Ellis, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2021	B	`conf`	Scaling Generalized N-Body Problems, A Case Study from Genomics. ICPP Marquita Ellis, Aydin Buluç, Katherine A. Yelick
2020	J	`jnl`	10 Years Later: Cloud Computing is Closing the Performance Gap. CoRR Giulia Guidi, Marquita Ellis, Aydin Buluç, Katherine A. Yelick, David E. Culler
2020	A	`conf`	LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment. IPDPS Alberto Zeni, Giulia Guidi, Marquita Ellis, Nan Ding, Marco D. Santambrogio, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2020	J	`jnl`	LOGAN: High-Performance GPU-Based X-Drop Long-Read Alignment. CoRR Alberto Zeni, Giulia Guidi, Marquita Ellis, Nan Ding, Marco D. Santambrogio, Steven A. Hofmeyr, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2020	J	`jnl`	Parallel String Graph Construction and Transitive Reduction for De Novo Genome Assembly. CoRR Giulia Guidi, Oguz Selvitopi, Marquita Ellis, Leonid Oliker, Katherine A. Yelick, Aydin Buluç
2020	J	`jnl`	The Parallelism Motifs of Genomic Data Analysis. CoRR Katherine A. Yelick, Aydin Buluç, Muaaz G. Awan, Ariful Azad, Benjamin Brock, Rob Egan, Saliya Ekanayake, Marquita Ellis, Evangelos Georganas, Giulia Guidi, Steven A. Hofmeyr, Oguz Selvitopi, Cristina Teodoropol, Leonid Oliker
2020	J	`jnl`	diBELLA: Distributed Long Read to Long Read Alignment. CoRR Marquita Ellis, Giulia Guidi, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2019	B	`conf`	diBELLA: Distributed Long Read to Long Read Alignment. ICPP Marquita Ellis, Giulia Guidi, Aydin Buluç, Leonid Oliker, Katherine A. Yelick
2017	—	`conf`	MerBench: PGAS Benchmarks for High Performance Genome Assembly. PAW@SC Evangelos Georganas, Marquita Ellis, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick
2017	—	`conf`	Performance Characterization of De Novo Genome Assembly on Leading Parallel Systems. Euro-Par Marquita Ellis, Evangelos Georganas, Rob Egan, Steven A. Hofmeyr, Aydin Buluç, Brandon Cook, Leonid Oliker, Katherine A. Yelick